BGIOSGA030869

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Revision as of 09:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030869| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030869, complete gene.| tag = OsI_315...")
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Gene Name

BGIOSGA030869

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030869, complete gene.

LocusTag

OsI_31585

Ensembl Transcript ID

BGIOSGA030869-TA

Ensembl Protein ID

BGIOSGA030869-PA

Length

3275

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15357952..15361226

Sequence Coding Region

15357952..15358189,15358282..15358369,15358721..15358774,15359031..15359180,15359325..15359456
,15359720..15359864,15359955..15359993,15360079..15360153,15360376..15360435
,15360561..15360625,15360960..15361050,15361209..15361226

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15357952..15361226 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15357952..15361226 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCAGCGGCTAAACCCTTCCCGTTCCTCGCCGCCGCCTCACGGTCCCCACTTCCCCTCTCACCCGCGACACGGCCGGCCCCAGCCTCGTCCCGCTTCGGCGACCGTCGCGCTCCCGCGGTGGTCGCTGCCACTGCCCGCCGCCGCGGCGCCCATGGGGTTCGAGCTCTCCGGCCCCTTCTCCTTCCCCGCGCCTCCGCTTCTCCCTCTGCGAAGACCGCGGCAGGAGGCATGTCTGACCCGGAGCTAAGGATGGTGCTCGAGCTCGCCACCGACGAGGAGCTGATGGAGTTCGAGGAGATCCTATACGGTACCAGTTATGAGCCACAGATGGCCAAACCCAAGCCTGCAAATTTATCTAAGATTAAGAGCTATTTTAGCCCACTGCTAAAATCAATTGCAAAAAGACCCAATTCAGATTATGTCGATGCTTTGGATGATATTGAGGAGAGAGATATTTTCATCTCAAAATTAGAGTCGAGGTTCCTGTATCTTGCTGCCGATGCCCGCTCAATCATAAGGGGATCTCGACCATCATACAGGAATGTCTTACTTGGAGTGAGAAGAGAACTTGGTGTTCGCTGCTCTAGTAAATTATGCACGGCAGACCTTGAGGCAGAAATATTTCTTCACTTGCTAGATGAATATTCGAGCCGTCAGAAAGGCCCAGATTTATTTCCGTGGAATAAACAGAAATCTCCAAAAGACAACTCTAGCCTTGGAGTTAACAAGTGGATGGTGCTTACTGATTCTGCTTGGAAGATTGGAGCAAAAGGACTAGAAAGTGCATTCTTGAAGGGTGGTAGTGCATTGACTCTGAAAATGATCTATGAATCGTTAGCCAAGAGACTATCTGGAAAGCTGCTCATGGAGGCTGGTAAATATGAGATAAAGAAAGAACTTCTAAAGCAGGGTGGACGATTAGCTGCTGTTAATCTGGAGTCTCGAGCTGGTTTGCTTGCAGCTAGGCAGGGTTTGGCACGTGCAGCATCTAGATATGTTGGTCTTAGGAGTGTCATGACGTTTCTTGGACCAATAATGTGGGGGACACTCTTGGCTGACATTGTGATCCAAATGCTTGGGACAGACTATGCTAGAATTGTGCAGGCAATCTATGCTTTTGCTCAGGGCATTCTGGGCCCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAKPFPFLAAASRSPLPLSPATRPAPASSRFGDRRAPAVVAATARRRGAHGVRALRPLLLPRASASPSAKTAAGGMSDPELRMVLELATDEELMEFEEILYGTSYEPQMAKPKPANLSKIKSYFSPLLKSIAKRPNSDYVDALDDIEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRRELGVRCSSKLCTADLEAEIFLHLLDEYSSRQKGPDLFPWNKQKSPKDNSSLGVNKWMVLTDSAWKIGAKGLESAFLKGGSALTLKMIYESLAKRLSGKLLMEAGKYEIKKELLKQGGRLAAVNLESRAGLLAARQGLARAASRYVGLRSVMTFLGPIMWGTLLADIVIQMLGTDYARIVQAIYAFAQGILGP</aaseq>

Gene Sequence

<dnaseqindica>1..238#331..418#770..823#1080..1229#1374..1505#1769..1913#2004..2042#2128..2202#2425..2484#2610..2674#3009..3099#3258..3275#ATGGCCGCCGCCGCAGCGGCTAAACCCTTCCCGTTCCTCGCCGCCGCCTCACGGTCCCCACTTCCCCTCTCACCCGCGACACGGCCGGCCCCAGCCTCGTCCCGCTTCGGCGACCGTCGCGCTCCCGCGGTGGTCGCTGCCACTGCCCGCCGCCGCGGCGCCCATGGGGTTCGAGCTCTCCGGCCCCTTCTCCTTCCCCGCGCCTCCGCTTCTCCCTCTGCGAAGACCGCGGCAGGAGGTATGCCCGGTGTAACGGAACTGGTGCTTTGGTGCGAGGTTGGGGTTGCCGGGTCGAAGTAGTGACAGGCAGTTGTTTGTTTGATTCTGAAGGCATGTCTGACCCGGAGCTAAGGATGGTGCTCGAGCTCGCCACCGACGAGGAGCTGATGGAGTTCGAGGAGATCCTATACGGTACCAGGTTCGATTTCTTGCTGGTAGTTCTAATGCTTTGTGGTACTGAAATAAATAATTGGGTGTGTGGATTGGTTGGTTCTGAAATAATTTCGCTAAAATTCCTATTCGCGGTTAGTTGTGGGGTATGTTGTGAAATGCGAATTAATACTTGCTGTTCTATTGGGTATTCCGTTGCTACCTTCTGTAATTATGCCACTGTGACAGTAAATAGCAATGTTTTATGATTTGCCTGTCATGCAAATTTGCAGCGCCCAAACCTTTGTAAGTACAACAAATTTGTGAAATATCTTGCCACTGCTATTTTGCTGCCTGTAAATATGTGGCATGAAACATTTAATTAGCTTCTGCGTTATAGTTATGAGCCACAGATGGCCAAACCCAAGCCTGCAAATTTATCTAAGATTAAGAGGTAAACTTTACTGTACCTATGATGAAATACATCTGTTATTGTATCTGACGTGTTGAGCATGGAGTTACCAATTTGTAAGAACTTCCTTTTCTCTTGATTTTTTATTTGCTTTGCTCACTGATTCAGTAACTCAGTTAGACTCACCTACTGACCTACTGAGTTTGTAATGTGAGAGCCATAGTATCTGTGAAGGAATATTTACCAATACTATTCCAATATTTCACCTTGCAATCAAGTAAATTTGTTTTCTATGCAGCTATTTTAGCCCACTGCTAAAATCAATTGCAAAAAGACCCAATTCAGATTATGTCGATGCTTTGGATGATATTGAGGAGAGAGATATTTTCATCTCAAAATTAGAGTCGAGGTTCCTGTATCTTGCTGCCGATGCCCGCTCAATCATAAGGTCAGTCAAGTAGCCTTTTGTTTTCTGTCTCAAATAGAAGTAGCCTTTGATTGGATTGACTTTTCTGTTAGTCAGCCAGCTTTAGTTCATCTATTTATTGAAGTTTTAACTGAACATTTGCACCTTTAAACTTGTATTTCATAGGGGATCTCGACCATCATACAGGAATGTCTTACTTGGAGTGAGAAGAGAACTTGGTGTTCGCTGCTCTAGTAAATTATGCACGGCAGACCTTGAGGCAGAAATATTTCTTCACTTGCTAGATGAATATTCGAGGTACTTAAAATATGGATGGAGAAATGTATCTGCAAACAAAATACCCTTCCGGAAAACAGTGCTTCCCTAAATAAATCATGTAGTCATCATCGCATGCAACTGCCATTTCATTTTTTGAACAATTTTCTTTGATGTCATTGTCACCATGAAGTATTCACTCTCTATCTGTGAATCCTTTCACAAGTCTGCAGTCTGCTACTCTCTTTAGAACACTAGTGGTCTTGACTCTTGAACATTAACATTTTTAATTGTCATGCATTCAGCCGTCAGAAAGGCCCAGATTTATTTCCGTGGAATAAACAGAAATCTCCAAAAGACAACTCTAGCCTTGGAGTTAACAAGTGGATGGTGCTTACTGATTCTGCTTGGAAGATTGGAGCAAAAGGACTAGAAAGTGCATTCTTGAAGGTTCTTTGTGATCCTCTTTATTATTATTTTCCTTTGTATCCCTCCAGTTTTTCTTTTTCTTTTGACTAATTCAGTTTTTTTTCCTTGAAGGGTGGTAGTGCATTGACTCTGAAAATGATCTATGAATCGGTAGGTATACTGTTTTATGAAGTTAGATTGATTTTACTTTTTCTTACAGCATCATTAGACATTAATGGACTTATCATCATGGTAGTTAGCCAAGAGACTATCTGGAAAGCTGCTCATGGAGGCTGGTAAATATGAGATAAAGAAAGAACTTCTAAAGCAGGTATATGTATTTTAGTTGATATCTGTAAGCAATTTTTCCTGATTTTATTATTTGCTCATCTCATAATTCTTTTAACAGAATAATAGATATACTCATGTTCTGGCCCCACCTGAAAAATGCAGTAGCATAGCTTGATACACAGATCATATACACAAGCTGTAACTATTTTTTTAATTGTTATAATAAATATCCTTTGGGAGTACTGAGGTTTGCCATCTGCAGGGTGGACGATTAGCTGCTGTTAATCTGGAGTCTCGAGCTGGTTTGCTTGCAGCTAGGCAGGTAACATTCTCATCTGTCAGCAGCTACTTCCATGCATAATTGGTATATTATGCTCCCAGTATTATCTGAAAAACTGCACATTTTAGATGGTCGTTTGAATAATCCTCTTGAATGTATGCATGCAGGGTTTGGCACGTGCAGCATCTAGATATGTTGGTCTTAGGAGTGTCATGACGTTTCTTGGACCAATGTATGTTTCTGCTAATATATCTGGAATCTGTTTGTTGCTGTATTTTTTTAAATCAATAATACACTATCAGGTTTCCGCATGTTTCTATAAAAAATTTGACCTCTTTTCCTTTTTGGTCAATAGTAGGTTCTTATGGTTAATTTATTTTTGGGTGCATGATGTATTCATGTTTTGCTACTTCAACTTGCTGTTCTGAGTTTACTGTTTGTCAGATCTACTTTTTAAGTAATGATTCATTCACAATAAGCTTCTTCAAATGCTTTGTTGTGTTGAATTTTGAGCAGACTATAAATCAGTTACTGACTCTTCTGTTCTACAACTTCTTGTTGCATAGAATGTGGGGGACACTCTTGGCTGACATTGTGATCCAAATGCTTGGGACAGACTATGCTAGAATTGTGCAGGCAATCTATGCTTTTGCTCAGGTGAGCTTCTGATTGTTCAGTTTTTCGTCCAGTAACTCACTGTCCATCCATTGAGCTCACATCTTAGCCTTTCTAACAGATTCGGCTGACTAGGACATCTTACATAGAATCTCATGAAGAATAATCAACAGTGGGACATTTCTGGTCTGGACTAACAGGGCATTCTGGGCCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030869