Os09g0299000

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0299000| Description = Similar to CDPK substrate protein 1| Version = NM_001069347.1 GI:115478433 GeneID:4346660| Length = 6133 bp| Defini...")
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Gene Name

Os09g0299000

Description

Similar to CDPK substrate protein 1

Version

NM_001069347.1 GI:115478433 GeneID:4346660

Length

6133 bp

Definition

Oryza sativa Japonica Group Os09g0299000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7881787..7887919

Sequence Coding Region

7882106..7882277,7885111..7885187,7885261..7885341

Expression

GEO Profiles:Os09g0299000

Genome Context

<gbrowseImage1> name=NC_008402:7881787..7887919 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7881787..7887919 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcccgcctgggctgatccaccaccggccggacggcggcgaggcggggcgtgcggcggggggagggcccagcctggtgctgaccgccgatcccaagccccgcctccggtggacggccgacctccacgagcgcttcgtcgacgccgtcgcccagctcggcggccccgagaaagcaacacctaaaactatcttgaggacaatgggtgtgaaggggctcactcttttccacttgaagagtcatcttcagaaatatagactggggaaacaatctggaaaagaggcatcggagcaatctaaagatggtaagttacacaaagcaatctactga</cdnaseq>

Protein Sequence

<aaseq>MFPPGLIHHRPDGGEAGRAAGGGPSLVLTADPKPRLRWTADLHE RFVDAVAQLGGPEKATPKTILRTMGVKGLTLFHLKSHLQKYRLGKQSGKEASEQSKDG KLHKAIY</aaseq>

Gene Sequence

<dnaseqindica>320..491#3325..3401#3475..3555#agattatactacaaccctccaatctataaacacagaagttgaagagagagaaagaagcaatagaggagagagaagagaagaggtcaagaagagaagcaagaggagagaggagaatcgctgcctctgccactggaaagcagcagcagcaggggagaggcagcaggcagcagcagaggagaagcaagaagcaagaaagagagagaaagcgttgggacttttcattggatcctccgcttttgggaggagcagcaaaggtctcgtctttcctctcttcttctcttccttgttgccggcgaggaggaagaagaaagaggaggagatgttcccgcctgggctgatccaccaccggccggacggcggcgaggcggggcgtgcggcggggggagggcccagcctggtgctgaccgccgatcccaagccccgcctccggtggacggccgacctccacgagcgcttcgtcgacgccgtcgcccagctcggcggccccgagagtgagatttcccccttgcttctctcccccccattctctccgatctccggtagcttagctcccccattggagaggcggcgcattggcgttgcgcttgcgcggttggttggtgggtgggtgggttgctccttcgttcttggtggtggtggtggtggttcgcgccaaagctcggattgggagcggagatttcggcgcgggatttggggggcattgttttgtttgttcggagattcaggaaatgctttggatcttttcgtttggttataataagtcttcgattttggcaaggagagaaatgcccgcttggccagcgcttagggaagcggatttagcccgctctaggctggttttggtgtgatttggaggggaaacttgtacccattagttgtttacaaattacaagtttggggagtttactgattggaggtgaaaaatcgaggtcggctactgatttgagctgcttgcttgtcctgtactttaacgaattctgcaccggtagcaatcaagagtgttttgttaatacgaaattggtggtggtttcgggtgttagaattgggacaaggatgagggagaagtttctgctcattttgggtttatttcagtggtttgtaagtgaacgcagtgggataaatacagcgatttcgcaatttcccacatgatgaggtgcagtatctcacattggcacaggcatagagcagatcagtatttggagaaaatggctcattcggtttaaaggattttcataggattattgtaggaattgaatccttaggaatttttcctatatgcatcattcgtttcataggaatggatcctaccaaattcctaaggattgtagtctttcaagctaattctgtaggattcttagcatgaggtgagacctcttaactttacctattcctttgatttggaattcctatgaaccgaataagccctaaggtagcggcttgattgttgccaccaacacggttcacctgctatgcttagtacttcagaaagacatctgcctagcttgcataggtgtgcaactcccgcctcacctgtatagccaatcgttccacctagagccacctgattggtgattaggcgttaggcgcttgccaccgtatataatcaacctagagtatgcattgaatgttttatcatataatcatgtttttggtggcaaagggtattcagaagcagaagttataaaggattgattactctagcatctgatgtatgaatcttggttcaacacgtaaccatggagctgtttgcactagtgaacagtaatccctgcacacatcatatttttaacctgactatattacatagttgactgatagggtttgtgcataagtttttcgttcatgtttgaattttgtgagatgggtgctatgcattgtctgtgctagtctatgcctaaaactttgtaatgactaatcactaatggttgatgcatgacttatgcagaggccggaataaaggcattcatttatcttaaaaacaacatagttgttcaaagatgatactgtttgatttttcttgggcgcagtctaggcatttttggtgtatttcttagaatctggtgcttacatgccaaaatgcttaacttatggtatagagctataatagttctatactgatttagtttagcttgatgctttgattttagtggactgtggtgtctgcaagaagtctttgattcaatcattaaaatttattaaggacatacagtgaatagaagtggctgtatttttctcctttgaggtcttactcaattttgttgacatgagtttagttcaatttactactgtcaattttcttgggacttgtttcaaatttcacagaactatgcaaatttacatatttaagccacaatatcaccaaactatagatttaacaccaaatttatcacaaattttggcctgtagttttctgtaatttactctattttctttataaaaattcaaggattcacttttacctttaggttctaattattttgatgaaccatttaaatctcagaccaacattacaagtgcttctgtgattactacctccgtccataaaaggccttagttttagctatgcacctggacaactgtctatacaaagaaaagcgtgtattgtactgttccttattttcttgtaggaggtataatcagtagcacagcgaaactcacactagatcaaaattctaaatcttaattgaatcatgtaggtagtctaaaaaaggttgtgcctgtggctttgtgcaccttctagtgcagtccctgggacaattattccattatctaaaaaaagtaaatgttggcactctaaattgctggtgcagtgcctgggataattattccattatctaaaaaaagtaaatgttggcactctaaattgctggtttatcattagtcaattgctaagggaatcaagatggattttttttacattttagacctttctaaaaacttattttacaaatagacccctaaaaaacttattccaggaatagacccttttcgcgacaccaatgtcattggcgccgtggtccaacataatgatgccaaagatattaccgccgtccccctttacattagtgagttagcttctgtggggatgctagggggacggtgccaatgtcattggcgccatcatgttggactacagcgtcaatgatgttggcaccgcaaaaagggtctattcctggagtaagttttttttggggtctatttgtaaaataagtttcccaaaaggtctaaaatgtgaaaaatccaggggaatccagtaaaacagtttaagatttgatttcattatatatttttaaattgagtactcaatgcatgattatcttgcagaagcaacacctaaaactatcttgaggacaatgggtgtgaaggggctcactcttttccacttgaagagtcatcttcaggtaattcataatacttttgcatgtcttgcaaagtttgaaatacagctatttaagtttgatcttcctcgaccagaaatatagactggggaaacaatctggaaaagaggcatcggagcaatctaaagatggtaagttacacaaagcaatctactgacctcactgttaatttcgattaatattccaacttccaagtcttgctgcaacaattccaatttgttcacattgtggaagttcattctgaagtcatgcaactatcctaccattgatctgtggacatgttaaatacggctctgctcatgaactggtgtcttatgaagttggttgatcatcgattgcaatttgatcaatattgatgtattgcaaggaatcactatgtagctaacttcttgaaaagattggagattgcttgaagttatatgatttggagatggtagcttgggtttactggtgttaagtttggatgcatcttgggaggaatcaattggtagcaacttcttaaaagaccagggattgctggaaatcgtatggattggagatggcagctatgttaacagtgttatgaatttcctttaagcttaccataaatctctgttctggggcaccagtctgtagggacatgaaggaatagagtggacctgatgtgggaaataatgggaggattcgtagttgagtggtctgcaggcaaccaaggactgaatggtgagagggaatctgtatgtggaggagtattttacgtcagtggacaagcttttctttttcagggactagctatatttttgacttcacatttttcaccataaaatagtcaattgttttttacattgtaaattacatatatttacactgtattacacaaatttacactgtagttttcaaaacttacattgtaaattccaatatttacaccataatttttatataggatttacagtgtagtagaagcaaaccagaaatcgactgataggtaaacacccatgtacctgcaaaactagcactaacaggtgcgctgtgtacaaataccaaagactccatgcataaaaaactgactgaaatctatcaatatttgtgtcgccacaaatatagcgattccatatgggtatatgcaaattcgtagtggcacacatgctgatccagaagctataggtcctgtccagtagggagaatttgtgggttgtacttttgccttgtgtagaaaaagttcagtcttgagttaaatttagccccagtaataattgcatattgctaagtaggagtactaacatgaataatcacatcaaggttcatcagtgggaaatggaagagaaattatacacaaaatgttggcaatattaagcgtagtgttggtacatgtatcgttgaattgcagtttattgtaattgtttcaaatggaaacgtttgtagattgaatttgctcatctagtcaaattctggactttgttatgcagatatgtctttttgacttgaaaaccacacttttaagagttcttttgaccttttactaacctctgacctctgctatggtttgcagcatcctatcttctagatgcccaaggtggaatgagtgtgtcgcctagagtttctactcaagatgttaaagagtaagctccatgggatactcatcctggacatttgtttctccattctggcaaatacgaatattttaataatagtgctcgtgttgtgctagtttaaaaagagttaaaatgtcacatgtacttgttacagaaatcaagaggtcaaggaagcattgcgagctcagatggaaatgcaacgaagactgcatgaacaagtggaggtaactttgaaagcttgatccgtcataatattctttggtttttatacatgccattagcaagaaagaagagctagtgctcaccaacttcagtatttgctacataagaataaagccctcaagctttaaaacaaatgatataccgtgaggctgatacttcaccaatattcagaacagccggtccttcaggatttgtgcgctgcatctcgtgttaccgaaaaatgtggaacacacttgttcattatcatttctacaactgcacttttaacacttagcatgccacacaatatgtcaacatgaaaagctctattgaagatctgttagttttaagattttcattgtaatcaggaatacattgtccaacacacaatagttgactatttcattttcccatgatcaggtccagaagcatgtgcagatcagaatggaagcctaccagaagtacatcgacactttactagagaaggcatgcaagatcgtctccgagcagcttgcctcaagcggcttcagcatctcggacaatgatctcccggagctctctggtggtgtcatgtgcggctccgctgacacattgagctcctccatcttccaccagctctctgtcagcccaatcaacctgcatagtcctgagggcaagccgacgccctcgggcatcgaaggccaaatgatcctccagaagtcacctgagcttaagcgcaagtcttgctgagccgtgtcgttcgacgcaatctggatgtgcaaacaccagttttcttgtcatgggggtagtcatgtcgaatttcggaattcgaatttcggtaagaaggggggatgctctgccaatcttgtagaggccatcttgttctctggctaatgcatgccaacattgtcaagtagcaaggttttctctcttatgttatcaatccaatcagcatatcttatataaaatgcctaatgtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0299000, RefSeq:Os09g0299000