Os10g0561200

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0561200| Description = Similar to CigA protein| Version = NM_001071916.1 GI:115483427 GeneID:4349383| Length = 2036 bp| Definition = Oryza...")
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Gene Name

Os10g0561200

Description

Similar to CigA protein

Version

NM_001071916.1 GI:115483427 GeneID:4349383

Length

2036 bp

Definition

Oryza sativa Japonica Group Os10g0561200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22577076..22579111

Sequence Coding Region

22577365..22578433,22578614..22579056

Expression

GEO Profiles:Os10g0561200

Genome Context

<gbrowseImage1> name=NC_008403:22577076..22579111 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22577076..22579111 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttgccggcgagccgcgggcggtggcggaagcggagcgcccggtcgcacgcgcccctcctcgtggccgtcctcgtgctcctcatcccggcctccctcctcctctcctcggcctactcctcgctgctccgctccatcctccccttctccggcttcggaggcggtggcggaggagggggcagaagatgtgggcggtcgccggagctggaaggggagaggtttctttggtacgcgccgcacagcgggttcagcaaccaggtgggcgagctccggaatgccgccgtcgccgccgcgctgctcaaccgcaccctcgtcgtgcccccggtgctcgaccaccacgccgtcgtcctcgggagctgccccaagttcagggtcgccgacgcttccgacctccgcgccgccgtctgggaccactccatgcagctcctccgggagcggaggtatgtatccatgggtgacataattgatctatcgccgataaaggctacggttagaacgattgatttcagggtgtttgtctcattgtggtgcggcgtagacatgcgcaagacttgcttctctggcttgtgctgtgctgtctctggtggtggatcgctgccaggtgattacgatagatgccgatcgatgctgtccggtttagggggcagcgaaaatggctgtgtgtatcctgtccaggacgattgccgaacaacagtctggacatatcaagagaataatgatggggcgcttgattcatttcaaccagatgaagacttgaaaaagaggaaaaagatatcatacgttaggaggcgcaaagatatgtacaaggctttggggcctggttctgaagctgaggatgcttccttgttggcatttgggacacttttctcaggaccatacaagggatcagagtcatattttgatatccacgaatcgccaaaggatcgtcggctacagactatacttgagaaggttgagttcctcccttttgcccctgagatcattgctacagggaaggagttcgctaggaaaaagatcaaggagccatttctttgcgcacagctaaggctgttagatgggcaattcaaaaatcactggaaagctacattttctgcactcaaggagaagttaaaggctgttgcgttggaaatgaagaaaacccagggtagtggtcctattcacatgttcatgatgactgatcttccaccagcaaactggtcaaagacctatcttgcagatattgcaaaagatgggagatataaattgcacaccctgaaggaaagtgatgaactggtggcacagaccgcagagcggcttatggctgctgaacatggtgtgagatctggatttattcccaaaaacatagcaaacacgaggaaggattgtgatccagttcaactaccagaaattttgttatatgttgaagaatctgtctgtagctgtgcatcactaggatttgtggggactgctggatcaaccatagcaggaagcatagaaacaatgaggaagaacaatgtctgccaattgtag</cdnaseq>

Protein Sequence

<aaseq>MDLPASRGRWRKRSARSHAPLLVAVLVLLIPASLLLSSAYSSLL RSILPFSGFGGGGGGGGRRCGRSPELEGERFLWYAPHSGFSNQVGELRNAAVAAALLN RTLVVPPVLDHHAVVLGSCPKFRVADASDLRAAVWDHSMQLLRERRYVSMGDIIDLSP IKATVRTIDFRVFVSLWCGVDMRKTCFSGLCCAVSGGGSLPGDYDRCRSMLSGLGGSE NGCVYPVQDDCRTTVWTYQENNDGALDSFQPDEDLKKRKKISYVRRRKDMYKALGPGS EAEDASLLAFGTLFSGPYKGSESYFDIHESPKDRRLQTILEKVEFLPFAPEIIATGKE FARKKIKEPFLCAQLRLLDGQFKNHWKATFSALKEKLKAVALEMKKTQGSGPIHMFMM TDLPPANWSKTYLADIAKDGRYKLHTLKESDELVAQTAERLMAAEHGVRSGFIPKNIA NTRKDCDPVQLPEILLYVEESVCSCASLGFVGTAGSTIAGSIETMRKNNVCQL</aaseq>

Gene Sequence

<dnaseqindica>679..1747#56..498#ggctttgcttaccgatccgatccgattcgccggcgtcggcggcggcggcggcgagatggatttgccggcgagccgcgggcggtggcggaagcggagcgcccggtcgcacgcgcccctcctcgtggccgtcctcgtgctcctcatcccggcctccctcctcctctcctcggcctactcctcgctgctccgctccatcctccccttctccggcttcggaggcggtggcggaggagggggcagaagatgtgggcggtcgccggagctggaaggggagaggtttctttggtacgcgccgcacagcgggttcagcaaccaggtgggcgagctccggaatgccgccgtcgccgccgcgctgctcaaccgcaccctcgtcgtgcccccggtgctcgaccaccacgccgtcgtcctcgggagctgccccaagttcagggtcgccgacgcttccgacctccgcgccgccgtctgggaccactccatgcagctcctccgggagcggaggtaaaaatctcactcccccaaagtggggttggttaatcctagattactctctttgcttgttaatgttacagtaatgcaatttccaaatttcacggtttccaccatagattaccatgttcatttggtaaattcgacacaaagccaaatatttattgctattttcatctgtttaacttgcaggtatgtatccatgggtgacataattgatctatcgccgataaaggctacggttagaacgattgatttcagggtgtttgtctcattgtggtgcggcgtagacatgcgcaagacttgcttctctggcttgtgctgtgctgtctctggtggtggatcgctgccaggtgattacgatagatgccgatcgatgctgtccggtttagggggcagcgaaaatggctgtgtgtatcctgtccaggacgattgccgaacaacagtctggacatatcaagagaataatgatggggcgcttgattcatttcaaccagatgaagacttgaaaaagaggaaaaagatatcatacgttaggaggcgcaaagatatgtacaaggctttggggcctggttctgaagctgaggatgcttccttgttggcatttgggacacttttctcaggaccatacaagggatcagagtcatattttgatatccacgaatcgccaaaggatcgtcggctacagactatacttgagaaggttgagttcctcccttttgcccctgagatcattgctacagggaaggagttcgctaggaaaaagatcaaggagccatttctttgcgcacagctaaggctgttagatgggcaattcaaaaatcactggaaagctacattttctgcactcaaggagaagttaaaggctgttgcgttggaaatgaagaaaacccagggtagtggtcctattcacatgttcatgatgactgatcttccaccagcaaactggtcaaagacctatcttgcagatattgcaaaagatgggagatataaattgcacaccctgaaggaaagtgatgaactggtggcacagaccgcagagcggcttatggctgctgaacatggtgtgagatctggatttattcccaaaaacatagcaaacacgaggaaggattgtgatccagttcaactaccagaaattttgttatatgttgaagaatctgtctgtagctgtgcatcactaggatttgtggggactgctggatcaaccatagcaggaagcatagaaacaatgaggaagaacaatgtctgccaattgtaggagaactgcacacatccttcgagcaaactgcctgaaaaaactaaccaccgttacttgactcgtcgactgtagatagcaatatgagagccgttacacaacagaagctgaatccttgagatcttccatccccagtgcatgcatgactgcatgagtatataatgctgaaagcccacgttttttttgttttttttatttgagtagaaaggtataacgtgtgccttaatcattcagttttgtaagtttggatacatttatttattttttggtatgtaatgtatccttcatcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0561200, RefSeq:Os10g0561200