Os10g0561300

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0561300| Description = Similar to Monosaccharid transporter| Version = NM_001071917.1 GI:115483429 GeneID:4349384| Length = 3483 bp| Defin...")
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Gene Name

Os10g0561300

Description

Similar to Monosaccharid transporter

Version

NM_001071917.1 GI:115483429 GeneID:4349384

Length

3483 bp

Definition

Oryza sativa Japonica Group Os10g0561300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22579553..22583035

Sequence Coding Region

22579726..22579876,22580417..22580736,22581754..22582839

Expression

GEO Profiles:Os10g0561300

Genome Context

<gbrowseImage1> name=NC_008403:22579553..22583035 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22579553..22583035 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgattggggcgttcgtggagagcggcggcggcggcggcgggggagggggaggagggtacggcgggcgggtgacggcgtacgtggtgctgacctgcgtcgtcgccggcagcggcgggatcctcttcggctacgacctcggcatctccggtggtgtgacctcaatggactcgtttctgaagagattcttcccggatgtgtaccagaagaagcaggacaccagagtgagccactactgcgcgttcgacagcgagctcctcaccgtgttcacctcgtcactctacatcgccggcctcgtcgcgaccctcttcgcgtcgtccgtcacaaggaggtatggccgccggacgtccatgctgatcggcggcaccgtcttcatcgccggctcggtgttcggcggcgccgccgtcaatgtgttcatgctgctcatcaaccggatcctactgggaataggtctcgggttcactaatcagtcaatcccactgtacctgtcagaaatggcgcctccacgataccgtggggcgatcaataacggcttcgagctctgcatcagcctcggcattctcttcgcaaatgttcttaactattgcgttgtgaaaatcacagctggatggggctggaggatatccctatccatggctgcagttcctgctgcattcctaaccatcggtgcggtcttcctcccagagacaccgagcttcataatcgaacgcgatggcgacactgacaaggcaaggatcctactccagagacttcgtggcaccacttcagtccagaaagagcttgatgacttagttgctgctagcaacctctccaggacagttcagtatccgttcaggaatatattcaagaggaaatacaggccacagcttgtcatagcactcctggtccctttcttcaaccagcttactggaatcaatgtgatgaacttctatgcaccggttatgttcaggacgattggtctgaaggagagcgcgtctctcctatcctcagtggtcaatcgactctgcgcaactttcgccaatatcatggcgatgatcgttgtcgacaggtttgggcgtagaaagctcttccttgtaggtggtattcagatgatcctttcccagcttgctgtgggtgcaatcctggctgcagagttcaaggactatggatccatggacagagagtatgcttaccttgtgttgatcaccatgtgtgtgtttgttgctggctttgcatggtcatgggggccattgacattcttggtcccaactgagatatgtccacttgagatcagatcagcagggcagagtattgttgttgcagtggtcttcctgatgacatttgtgattggacagacattccttgcagttctatgccgcatcaagtcagggacattcttcttctttgcaggatggatctgcttgatgacagtgtttgtttatttcttcctgccggagacaaagaagctgcccatggagcagatggagcaggtctggaggaagcattggttctggaagaagattgtaggggaggaggaggaaaaacaagcagagaaaacagctctccctagcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MAIGAFVESGGGGGGGGGGGYGGRVTAYVVLTCVVAGSGGILFG YDLGISGGVTSMDSFLKRFFPDVYQKKQDTRVSHYCAFDSELLTVFTSSLYIAGLVAT LFASSVTRRYGRRTSMLIGGTVFIAGSVFGGAAVNVFMLLINRILLGIGLGFTNQSIP LYLSEMAPPRYRGAINNGFELCISLGILFANVLNYCVVKITAGWGWRISLSMAAVPAA FLTIGAVFLPETPSFIIERDGDTDKARILLQRLRGTTSVQKELDDLVAASNLSRTVQY PFRNIFKRKYRPQLVIALLVPFFNQLTGINVMNFYAPVMFRTIGLKESASLLSSVVNR LCATFANIMAMIVVDRFGRRKLFLVGGIQMILSQLAVGAILAAEFKDYGSMDREYAYL VLITMCVFVAGFAWSWGPLTFLVPTEICPLEIRSAGQSIVVAVVFLMTFVIGQTFLAV LCRIKSGTFFFFAGWICLMTVFVYFFLPETKKLPMEQMEQVWRKHWFWKKIVGEEEEK QAEKTALPSM</aaseq>

Gene Sequence

<dnaseqindica>174..324#865..1184#2202..3287#atgtcggcatccgccaacccctcctcgccttcttcttctccagtaataaatccacgcaaaagcctcgccgcgcaccaccacccagctctctccactccactctcgcgttcttgtggagtcgtgctccactccgggaaggaaggagtgggtgggtaggtgagtggagttggtcgatggcgattggggcgttcgtggagagcggcggcggcggcggcgggggagggggaggagggtacggcgggcgggtgacggcgtacgtggtgctgacctgcgtcgtcgccggcagcggcgggatcctcttcggctacgacctcggcatctccggttcgtgccgccgccgccgcctcgcgcggttgattacttcctcgctgtagtaaatctatctcatctgttcatctcgtctactgcttgtgagttgtgactgtgtcgtgtgctggctcgtggttgggcctgtctgcatctgcatgggccggtgttaatggctggctcgggcccagtctacgtacaagaaaaggtttgcaagcttttttgtcatgaggaattaagaagctgcatttccagctcaaaagatctcatcttccagcagtaatgcagcttctcatcaatgttgccaacactttactctttgtattccttttttttttttgtgtgtgtgtgtgtgtgtgtgtgagatggaagacgaggcttcttgttttgtgtggagagtatagataaagataagtaatgtagtttggatgatcacgcaaacattgttcaagttctcctgcttaatctgtccactgatgttgtgacttaactaccactagtacggaggaaagatcatgctgaaagctcatgtactcgatcgtgtatgaattgtggcaggtggtgtgacctcaatggactcgtttctgaagagattcttcccggatgtgtaccagaagaagcaggacaccagagtgagccactactgcgcgttcgacagcgagctcctcaccgtgttcacctcgtcactctacatcgccggcctcgtcgcgaccctcttcgcgtcgtccgtcacaaggaggtatggccgccggacgtccatgctgatcggcggcaccgtcttcatcgccggctcggtgttcggcggcgccgccgtcaatgtgttcatgctgctcatcaaccggatcctactgggaataggtctcgggttcactaatcaggtataattctcagcacatttgatttcaggtcagtaatctctgaatgaatgtgaatctagttcaagagatagtgcagagatatctgtcacacatttttagagtgcctgttatattaaagaaaataaggaactctgttaaactattgcacaattcagataaaaaaaaaacttgtactccgtatgtggcatggtactccttatgttgttttagaagtcactagtacatcaagttcatgccatcatgcacatcgtgatgctatctagagttctagacaatgtatcaaaatcataaatcttgcatgctgaacctaacaccacacacttgaaaacgaaatgcaggccatgcgtgtcgtgtgcacaaaagtcaagtcttcattgacttgggtttagagggtatagacagcgggtttatgtggatgtactttgttccaagttgataacactcgacaagaagtggagcactgacaaactacatggttgtctttataatattaaggtcttgtttgtgtatagatcattgcattgacttgacaagtcatattttcgtttttgtggccataacgagtgagtgggtcattaaaaagttaagaagtttttacagcctgttgaatctctgttttggagagggacagtgttgaaatattgtgtggagatacaacgcagagggaaagcaacaaactatgtcgtggtctaaaaacttggcgatttactgcctagataggaattagaatggcttatgagaaaaacagtgactgttcactgatccaatctcacactgtgcaagacaagggagatccggagataaagcccaatcttgcaatcaagattttcagataacatagaaaagggattccactttgtaactaaacttcattatgcacataattttccttctgatgcatactcctaatcctagactctaatttttgcatttgttctttcttaacaatagtttcctccttcccaaaggacagtggtaactgtactgacgcctttgctatgaaactatattttgcagtcaatcccactgtacctgtcagaaatggcgcctccacgataccgtggggcgatcaataacggcttcgagctctgcatcagcctcggcattctcttcgcaaatgttcttaactattgcgttgtgaaaatcacagctggatggggctggaggatatccctatccatggctgcagttcctgctgcattcctaaccatcggtgcggtcttcctcccagagacaccgagcttcataatcgaacgcgatggcgacactgacaaggcaaggatcctactccagagacttcgtggcaccacttcagtccagaaagagcttgatgacttagttgctgctagcaacctctccaggacagttcagtatccgttcaggaatatattcaagaggaaatacaggccacagcttgtcatagcactcctggtccctttcttcaaccagcttactggaatcaatgtgatgaacttctatgcaccggttatgttcaggacgattggtctgaaggagagcgcgtctctcctatcctcagtggtcaatcgactctgcgcaactttcgccaatatcatggcgatgatcgttgtcgacaggtttgggcgtagaaagctcttccttgtaggtggtattcagatgatcctttcccagcttgctgtgggtgcaatcctggctgcagagttcaaggactatggatccatggacagagagtatgcttaccttgtgttgatcaccatgtgtgtgtttgttgctggctttgcatggtcatgggggccattgacattcttggtcccaactgagatatgtccacttgagatcagatcagcagggcagagtattgttgttgcagtggtcttcctgatgacatttgtgattggacagacattccttgcagttctatgccgcatcaagtcagggacattcttcttctttgcaggatggatctgcttgatgacagtgtttgtttatttcttcctgccggagacaaagaagctgcccatggagcagatggagcaggtctggaggaagcattggttctggaagaagattgtaggggaggaggaggaaaaacaagcagagaaaacagctctccctagcatgtaaagccctatgaattggaatgtatttgaccatacaaaaaccatacaaagtgtagggttctaattagcaaatgtaagtttgtaattcttctgtctaaatgtagtgtgttgaggtggtcagttgccgtgactggctctttcagatggtaattacaaagaaatgtaacattaatgttgtaacaagggtgccattttgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0561300, RefSeq:Os10g0561300