BGIOSGA030909

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030909| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030909, complete gene.| tag = B1045B0...")
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Gene Name

BGIOSGA030909

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030909, complete gene.

LocusTag

B1045B05.18

Ensembl Transcript ID

BGIOSGA030909-TA

Ensembl Protein ID

BGIOSGA030909-PA

Length

2294

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:15989907..15992200

Sequence Coding Region

15989907..15989976,15990061..15990604,15990701..15991170,15991259..15991394,15991501..15991572
,15991696..15991764,15991855..15991926,15992013..15992084,15992173..15992200

Genome Context

<gbrowseImage1> name=IndicaChromosome09:15989907..15992200 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:15989907..15992200 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCCCCCTCTCCCTCCTCGCCGTCGTCCTCGTCTTCGGCATCGCCGGCGCCGCCGATGGCCTTTCAGGGTACCAGATAAGTTGCGGTGCGACGTCGGAGAAGGTGGTCGGCGACGTGACATGGGTTCCCGACGGCCGGTTCGTCAGCGTCGGCAACGTCTCCGACATGCGGTCGCCGGGGGTGCTGCCGGTGCTCTCCTCGCTCCGGTACTTCCCCGACACGTCGGCGAGGAAGTACTGCTACGTGGTGCCCGCGGAGAGGAAGAGGAAGTACCTCGTCCGTACGACGTACTTCTACGGCGGGTTCGACGGCGGCAGCGCGCCGCCGGTGTTCGACCAGATCATCGAGGGCACGCGGTGGAGCGAGGTGGACACGGCGGGGGACTACGCCAGGGGCCTTGCCACGTACTATGAGGCCGTCGTGCTCGCCACCGAGAAGGAGGTCAGCGTGTGCCTCGCCAGGAACGCCGCCACCAAGTCCAGCCCCTTCATCTCCGCGCTTGAGGTGTCGCCATTGGAGGACTCGGTGTACAACTCCACCGACTTCGAGTCCTACGCTCTCAGCACCATTGCGCGCCACAGCTTCGGCCACGACGGCTCAGCGGCCGTCAGCTATCCAGGCGATCGTTTCAACCGGTTCTGGGAGGCGCACAGCGACGGGATGCCGGTGGTGGAGAGCCAGGCGAGCGTGTCGCAGGCGGCGTTCTGGAACAAGCCACCGGAGGACGTGTTCCGCCGAGGCGTCACGACGGCCGGCGGCCGCGGTGAGAGCCTGGAGCTCCAGTGGCCGCCGGCGCCGCTCCCCGCCGCGAGCTACTACCTGGCGCTCTACTTCCAGGACAACCGCGCGCCGGGCCCGCTCAGCTGGAGAGTGTTCGACGTCGCCGTCAACGGCGAGACGTTCTTCGCCGGCCTGAACGTGTCGACGGCCGGGTCGATGCTCTACGGCGACAAGTGGCCGCTCTCCGGGCGGACAAAGATCACGCTGACGCCTGCGCCAGGCTCGCCGGTCGGGCCGGTGATCAACGCCGCCGAGCTGATGATGGTTGTGCCACTCGGAGGGAGGACACATCCCAGAGATGTGATCGGCATGCAGGCGCTAGCCAGAGGTTTCGACAACCCACCGGCTGACTGGGCCGGCGATCCATGTTTGCCTCAGGGGAACTCATGGACTGGTGTCACCTGCACCCAAGAACCACTTGCTCGAGTGGTTTCTCTGAATCTCACGAATTTTAAAGTTGGGGGATCAATATCTGACGGCATTGCCAACCTGACAGCGATCTCAAGCATTTGGCTTGTGGGAAACAATCTGACCGGACCAATTCCAGATATGAGCCTCCTACATCATTTGGTTTCCCTGCATCTGGAGAACAACCGACTGACAGGGCAGATTCCTCCATCTCTAGGGAGCATGCCAAGGCTTCGTGAATTGTTTGTGCAGAACAATGCACTGCAAGGGGCGATTCCGATCAGCTTCAAGAACAAAACGGGCTTCATGTTCCAATATGCACCTGGGAATAACCTTAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MIPLSLLAVVLVFGIAGAADGLSGYQISCGATSEKVVGDVTWVPDGRFVSVGNVSDMRSPGVLPVLSSLRYFPDTSARKYCYVVPAERKRKYLVRTTYFYGGFDGGSAPPVFDQIIEGTRWSEVDTAGDYARGLATYYEAVVLATEKEVSVCLARNAATKSSPFISALEVSPLEDSVYNSTDFESYALSTIARHSFGHDGSAAVSYPGDRFNRFWEAHSDGMPVVESQASVSQAAFWNKPPEDVFRRGVTTAGGRGESLELQWPPAPLPAASYYLALYFQDNRAPGPLSWRVFDVAVNGETFFAGLNVSTAGSMLYGDKWPLSGRTKITLTPAPGSPVGPVINAAELMMVVPLGGRTHPRDVIGMQALARGFDNPPADWAGDPCLPQGNSWTGVTCTQEPLARVVSLNLTNFKVGGSISDGIANLTAISSIWLVGNNLTGPIPDMSLLHHLVSLHLENNRLTGQIPPSLGSMPRLRELFVQNNALQGAIPISFKNKTGFMFQYAPGNNLS</aaseq>

Gene Sequence

<dnaseqindica>1..70#155..698#795..1264#1353..1488#1595..1666#1790..1858#1949..2020#2107..2178#2267..2294#ATGATCCCCCTCTCCCTCCTCGCCGTCGTCCTCGTCTTCGGCATCGCCGGCGCCGCCGATGGCCTTTCAGGTGATGAACGCTTTTGCCCTCGGTGAGTTCACAACGTGCAATGTGCTTGGGCAGTTGATGAACATTGTCCGCGTTTGTACACAGGGTACCAGATAAGTTGCGGTGCGACGTCGGAGAAGGTGGTCGGCGACGTGACATGGGTTCCCGACGGCCGGTTCGTCAGCGTCGGCAACGTCTCCGACATGCGGTCGCCGGGGGTGCTGCCGGTGCTCTCCTCGCTCCGGTACTTCCCCGACACGTCGGCGAGGAAGTACTGCTACGTGGTGCCCGCGGAGAGGAAGAGGAAGTACCTCGTCCGTACGACGTACTTCTACGGCGGGTTCGACGGCGGCAGCGCGCCGCCGGTGTTCGACCAGATCATCGAGGGCACGCGGTGGAGCGAGGTGGACACGGCGGGGGACTACGCCAGGGGCCTTGCCACGTACTATGAGGCCGTCGTGCTCGCCACCGAGAAGGAGGTCAGCGTGTGCCTCGCCAGGAACGCCGCCACCAAGTCCAGCCCCTTCATCTCCGCGCTTGAGGTGTCGCCATTGGAGGACTCGGTGTACAACTCCACCGACTTCGAGTCCTACGCTCTCAGCACCATTGCGCGCCACAGCTTCGGCCACGACGGCTCAGCGGCCGTCAGGTAAGAACAATCACGCACCACCGCCCATTTCCTTGCTACGAATTCATGGCGTGCTTGCCGCTTGATGCTCGTCGAATCTGTGATTTTTTTTTCTAGCTATCCAGGCGATCGTTTCAACCGGTTCTGGGAGGCGCACAGCGACGGGATGCCGGTGGTGGAGAGCCAGGCGAGCGTGTCGCAGGCGGCGTTCTGGAACAAGCCACCGGAGGACGTGTTCCGCCGAGGCGTCACGACGGCCGGCGGCCGCGGTGAGAGCCTGGAGCTCCAGTGGCCGCCGGCGCCGCTCCCCGCCGCGAGCTACTACCTGGCGCTCTACTTCCAGGACAACCGCGCGCCGGGCCCGCTCAGCTGGAGAGTGTTCGACGTCGCCGTCAACGGCGAGACGTTCTTCGCCGGCCTGAACGTGTCGACGGCCGGGTCGATGCTCTACGGCGACAAGTGGCCGCTCTCCGGGCGGACAAAGATCACGCTGACGCCTGCGCCAGGCTCGCCGGTCGGGCCGGTGATCAACGCCGCCGAGCTGATGATGGTTGTGCCACTCGGAGGGAGGACACATCCCAGAGATGGTAACTTGACAAACTCTCATGGATCATGCCGAATTCGTGGTTTGCTCATCGAAATTTATTCATGTCTCATTGTCTCGTGTTGCTGCAGTGATCGGCATGCAGGCGCTAGCCAGAGGTTTCGACAACCCACCGGCTGACTGGGCCGGCGATCCATGTTTGCCTCAGGGGAACTCATGGACTGGTGTCACCTGCACCCAAGAACCACTTGCTCGAGTGGTTTCTCTGTAAGTTACTGATTGCCATATGTACTATATGCATCAATGCCTGCAAAAGGGGCAGTATGTTCTCTTGTTGATCTCTGAAACCGAAATGGTGGCAATCACACGGCAGGAATCTCACGAATTTTAAAGTTGGGGGATCAATATCTGACGGCATTGCCAACCTGACAGCGATCTCAAGCATGTAAGCCTCCTTAAACAAGCTAATGCCAGACTCCCATTCTTTAATTGTCCTGCTGACAGATTGGAAAAAGATTGCAGTGGTAAAGTAAATATTGATTGCCTAATTTGGGTACGGTGATTGCAGTTGGCTTGTGGGAAACAATCTGACCGGACCAATTCCAGATATGAGCCTCCTACATCATTTGGTTTCCCTGTAAGCACAGTAGCTACATACTGCTCAATAATTGTTTTGGAGAATGCTTCAGTAAACTGAAGATCACCTGGCTAAATTTCTTAACTGAAGGCATCTGGAGAACAACCGACTGACAGGGCAGATTCCTCCATCTCTAGGGAGCATGCCAAGGCTTCGTGAATTGTAAGTGGCTTCAACAAGTAGTTTATACTAGTCAAGTATTTGAGTTCATCGACTTGTTATGACCGCTTGAGTTTTTTGCTTGACAGGTTTGTGCAGAACAATGCACTGCAAGGGGCGATTCCGATCAGCTTCAAGAACAAAACGGGCTTCATGTTCCAGTGAGTGATCACGAGTGCTGTATTTAAGCTTGTGATTCCTTATTTTTCTTTAGTGACTGATGAAATGAAAATAATCTTGCTCTGACAGATATGCACCTGGGAATAACCTTAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030909