BGIOSGA030922

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030922, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030922, complete gene.

LocusTag

OSJNBA0054F02.48

Ensembl Transcript ID

BGIOSGA030922-TA

Ensembl Protein ID

BGIOSGA030922-PA

Length

2422

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16115594..16118015

Sequence Coding Region

16115594..16115731,16116400..16116581,16116662..16116848,16117119..16117286,16117432..16117734
,16117830..16118015

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16115594..16118015 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16115594..16118015 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGTGAAAAACATATCATTTGTAGACATCCACCAACTTATGGCAACCTCATAACAGTTCTCTCGATTGATGGTGGAGGGATTCGAGGAATCATTCCAGCTGTTGTTCTTACCTTTCTAGAATCAGAGTTGCAGAAACTTGATGGAGAGGAAGCCCGAATAGCCGACTATTTTGATGTCATTGCTGGGACTAGCACAGGGGGGTTAGTGACTGCGATGCTGGCTGCACCAAACAAGAAAAGAAGACCACTTTTTGCAGCCAAGGATATTAAAGCATTTTATATGAACCATGCTCCAAAAATTTTTCCACAGCTCAGGGGTCCATTCGGTAGGATGATGAGGATATTTCGATCAATGTCAGGACCTTCCTATGATGGCAAGCACCTTCATGAAGTTGTAAGAGAGAAATTAGGAAGCACCAGGCTGCATCAGACTTTAACAAATGTGGTCATACCAACTTTCGACATCAAGCGGTTACAACCAACCATTTTCTCTTCCTACGAGGTTAAGAAGAAGAACAACAACACTATGGATGCTCTGCTATCAGATATTTGCATCAGCACGAGCGCTGCTCCGACTTACCTGCCTGCGCACTTCTTCAGGACTGAAGATTGTCATGGAAACATCAAGGAATTCAATCTTATTGATGGTGGAGTAGCTGCCAATAATCCGGCTTTAGTTGCCATTGGAGAAGTAAGCAAGCAGATATTCAAGAAAAATCCAGATTTCTTCCCAGTAAAACCAATGGACTACGGCCGTTTTTTGGTCATTTCACTTGGCACGGGCTCCCCAAAAATTGAAGGGAAATACAATGCACAAAATGCTAAATCATGGGGAGTTCTGGATTGGTTGCTTGTTGGTGGGTCCACTCCCTTGGTAGATATTTTCACACAAGCAAGTGCTGATATGGTGGATATCCACATCGCTGCTGTTTTCAAAGTTTTACATTCTGAGCAGAACTATCTGAGGATTCAGGATGATACTCTCGAAGGGACACTCGCATCTGTTGATGTTGCTACTAGGGATAATCTGGAGAAACTTGCTAATGTTGGAGAAATACTGCTAAACAAACCTGTCTCACGGGCAAATTTGGAGACTGGCCAGATGATGCCTGCTTGTGATGACTCAGAAATTACCAACGGGGAAGCTCTCAAGAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MESEKHIICRHPPTYGNLITVLSIDGGGIRGIIPAVVLTFLESELQKLDGEEARIADYFDVIAGTSTGGLVTAMLAAPNKKRRPLFAAKDIKAFYMNHAPKIFPQLRGPFGRMMRIFRSMSGPSYDGKHLHEVVREKLGSTRLHQTLTNVVIPTFDIKRLQPTIFSSYEVKKKNNNTMDALLSDICISTSAAPTYLPAHFFRTEDCHGNIKEFNLIDGGVAANNPALVAIGEVSKQIFKKNPDFFPVKPMDYGRFLVISLGTGSPKIEGKYNAQNAKSWGVLDWLLVGGSTPLVDIFTQASADMVDIHIAAVFKVLHSEQNYLRIQDDTLEGTLASVDVATRDNLEKLANVGEILLNKPVSRANLETGQMMPACDDSEITNGEALKR</aaseq>

Gene Sequence

<dnaseqindica>1..138#807..988#1069..1255#1526..1693#1839..2141#2237..2422#ATGGAGAGTGAAAAACATATCATTTGTAGACATCCACCAACTTATGGCAACCTCATAACAGTTCTCTCGATTGATGGTGGAGGGATTCGAGGAATCATTCCAGCTGTTGTTCTTACCTTTCTAGAATCAGAGTTGCAGGTAAATATTTATGTTATACTATGAGTTCCATTTCGTGGCCAAGGCAACTCTAACTTGTCGAGAGATAAGTTCCAAGGACAAGGGAAAACTGGTGCTCTAGGGTTAGGAAACGGCATTTGTTTGGTTTGCTTGTTTTAAATTTAAACCATTTAGATTCAAACTTAATTCAGTAACCATATCTTTCTATAAATTAAGACATCCTTTCGTTTCGAAGTAGATCTTAATTCTTAAAAACCTTTTTCATTAGTGCCAGAATGAGATTTACTGATCTTTTCTGCCATATGTTCTGTCTTTAGCCATTTCTTTTATGCAGATGTAATTGTTCAACAGTTGCTCAGGTTTTTCAGCATTTCTTTCTGCATCGAATATTCCGAATTCATTTTTGATACGGCTGGAACAGCCATAACAATTATTCTGCTAGTTGAGAAAATCTGATTGTTATGTCCCATCTATAGATGGTGAATTGAATGTTGTGGTACCACCAAAAATAAACTTGGCATGCTAAATTAAATTTCCCTTTTCATTTCAATCTCTGTTTGATCTACATTCTGACTCTCTCTCTGTAGTAGCATAACCGTGTGTGTGTGCACGAAATGAACTGTTCAGATTATACACAGTTCATGTTCTTGACTGCTTCTCATGAAATCTTTTCTGTTTAATTTCTCAAGAAACTTGATGGAGAGGAAGCCCGAATAGCCGACTATTTTGATGTCATTGCTGGGACTAGCACAGGGGGGTTAGTGACTGCGATGCTGGCTGCACCAAACAAGAAAAGAAGACCACTTTTTGCAGCCAAGGATATTAAAGCATTTTATATGAACCATGCTCCAAAAATTTTTCCACAGCTCAGGTGAATACATATACTGCAGTTTTTTTTTTTTCTGATATGATTCATAACTTGGCTGGTTGACATTTTGCTTCTCTCTTTAGGGGTCCATTCGGTAGGATGATGAGGATATTTCGATCAATGTCAGGACCTTCCTATGATGGCAAGCACCTTCATGAAGTTGTAAGAGAGAAATTAGGAAGCACCAGGCTGCATCAGACTTTAACAAATGTGGTCATACCAACTTTCGACATCAAGCGGTTACAACCAACCATTTTCTCTTCCTACGAGGTATCCCTCTTTCCCTTCATCCTTCTCCCTTTAAAGTCTCTCAAGAGTATTTTGTGTGTTGTTTTGGACACAAGTGTCTACAATTCGTAATAAAATTCAATCAATTCAATTTTAAGGGCACAAGAACATGTATTATACACAAGTACTTATTTCTCTATTTTGCTATGAAAATAATTCATAGGAATTATTTATGAGCCAGTAATAAGAACTCCCATCAATACAACAATGATGGAGACTACACAACATGAACCTTATGCTCTCATATCATAGGTTAAGAAGAAGAACAACAACACTATGGATGCTCTGCTATCAGATATTTGCATCAGCACGAGCGCTGCTCCGACTTACCTGCCTGCGCACTTCTTCAGGACTGAAGATTGTCATGGAAACATCAAGGAATTCAATCTTATTGATGGTGGAGTAGCTGCCAATAATCCGGTACGATGTCTCTGTAGTTGTGAACAACTCATTACCATTGAAGTGCACTCTGTGATGTTGAAAATGGTTTGGCAAGTTTACCCAGTTCATATATTGAAGCGATGTTTTTTCCCCAAAAGGCCCTGAACATGTCTATCTTGTTTAGGCTTTAGTTGCCATTGGAGAAGTAAGCAAGCAGATATTCAAGAAAAATCCAGATTTCTTCCCAGTAAAACCAATGGACTACGGCCGTTTTTTGGTCATTTCACTTGGCACGGGCTCCCCAAAAATTGAAGGGAAATACAATGCACAAAATGCTAAATCATGGGGAGTTCTGGATTGGTTGCTTGTTGGTGGGTCCACTCCCTTGGTAGATATTTTCACACAAGCAAGTGCTGATATGGTGGATATCCACATCGCTGCTGTTTTCAAAGTTTTACATTCTGAGCAGAACTATCTGAGGATTCAGGTAAGAAAGAGATACAGACAGTTTATTTTTTTTATCAAGTAATAGCCAACAAACATGATTCCTAATATAAAAAAAATGCCACTTTGGAATAACAGGATGATACTCTCGAAGGGACACTCGCATCTGTTGATGTTGCTACTAGGGATAATCTGGAGAAACTTGCTAATGTTGGAGAAATACTGCTAAACAAACCTGTCTCACGGGCAAATTTGGAGACTGGCCAGATGATGCCTGCTTGTGATGACTCAGAAATTACCAACGGGGAAGCTCTCAAGAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030922