BGIOSGA030924

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030924| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030924, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA030924

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030924, complete gene.

LocusTag

OSJNBB0019B14.3

Ensembl Transcript ID

BGIOSGA030924-TA

Ensembl Protein ID

BGIOSGA030924-PA

Length

3096

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16138306..16141401

Sequence Coding Region

16138306..16138533,16139269..16139722,16140662..16140720,16140808..16140938,16141038..16141134
,16141237..16141401

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16138306..16141401 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16138306..16141401 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTACAAATGATTGGGTCACAGTGCTGAAAAAGGGAAATGGCTTAGCAGTTTGTAGCAACCGCTGGGCAAACGGAAGGCATGGATCTGCGAGCTGGAACTGGGACTTGCAGTGCAGTGGCCTCGTTTCGTTTCATCAGATTGGCTGCGCCGATATGCCCGTCCTTCCTTCCTGTACTGGCGATGGGAAATGTTCGTTTGTTCGTATGTTCGGCCTGATGTGCCAGGTTGTAGCAATAAAGGTTATTCGTAATAAGCAAACTGGACAATCGGAGGGATATGGATTTGTAGAGTTCTACAGTCATGCTGCTGCTGAGAAAGTACTTGAAGGATTTGCTGGTCATATAATGCCAAACACTGACCAACCTTTTAGGATAAATTGGGCATCATTTAGCATGGGGGACAGACGTTCAGATATTGCTTCAGATCATTCCATATTTGTAGGCGACCTTGCTTCTGATGTCAATGATACCACATTACTAGAGACTTTCTCCAAAAGGTACTCCTCTGTCAAAGGTGCGAAAGTTGTTATTGATGCTAATACTGGTAGATCAAAGGGCTATGGTTTTGTGAGATTTGGAGATGATAACGAGAAGACACATGCCATGACTGAGATGAATGGTGTGTATTGCTCTACCAGGCCAATGAGAATTGGCCCTGCAACTCCCAGAAAAACCTCAGGTACTTCTGGACCTACTGGTTCAGCTGCTCGATCAGATGGAGATTTGACAAACACAACTGTATTTGTCGGTGGGCTTGATCCAAATGTTAGTGAAGATGACCTTAGGCAAACATTTTCGCAATACGGTGAAATTTCATCGGTAAAGATCCCAGTTGGGAAACAGTGCGGCTTTGTGCAGTTTGTTCAGAGGAAGAATGCGGAAGATGCATTGCAAGGACTGAACGGAAGCACCATTGGGAAACAGACCGTGCGTCTTTCGTGGGGACGCAATCCAGCAAACAAGCAGTTGAGGAGTGACAATGGCAGTCAGTGGAACAACGGGATGTTCTACGCAGCCTCGCCGTTTTACAGTGGATACGGCTACCCTGCACCGTTCCCTGCTGATCCGGGCATGTACGCTGCTGCTTATGGCGCCTACCCGTTCTACGGAAACCAACAACAAGTGAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MGTNDWVTVLKKGNGLAVCSNRWANGRHGSASWNWDLQCSGLVSFHQIGCADMPVLPSCTGDGKCSFVRMFGLMCQVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMYAAAYGAYPFYGNQQQVS</aaseq>

Gene Sequence

<dnaseqindica>1..228#964..1417#2357..2415#2503..2633#2733..2829#2932..3096#ATGGGTACAAATGATTGGGTCACAGTGCTGAAAAAGGGAAATGGCTTAGCAGTTTGTAGCAACCGCTGGGCAAACGGAAGGCATGGATCTGCGAGCTGGAACTGGGACTTGCAGTGCAGTGGCCTCGTTTCGTTTCATCAGATTGGCTGCGCCGATATGCCCGTCCTTCCTTCCTGTACTGGCGATGGGAAATGTTCGTTTGTTCGTATGTTCGGCCTGATGTGCCAGGTTGGTGGGTAGCGTCATCCTTGGTGTGTACGGTGTACCATTGCCGTCCATCTGTTGCATCTCTCATTGGTCGACTAATTTTAGGCTTGTGCTGTGTTTAGGAGATGGACGGTTTGAAGGTTTCTTGTTTCTTTTTCTTTCATATAATGATATAGGGAATGTTTTCTTTACGTACGCGGATACTAAGGAGCTGATGGCCACATAAATAGTTCCACAAGGTGAACCGGTGTTTATATAAGGAAGGTGTAATACTCTTTTTCATTATCTAAAAAGATGTTGGTGGACACAAACAAAACGAGAAAATAATAGTGATAAATGATGTTTCCAAACACCAGATTGATTCTAATTAGGACTTTACAGTTTGTACTGAAGATGTGACCTCTCCTTTAGTTGTTTTTTATGGAGTTTCTGTTTGTAGCGGTACACTAGCTTTTCCTGTTCCCTTCTATGCTAGTTTTTAGGAGGCTGAACATACAAAAAGTTCGTTCATAAGGTTTCATAATTTGCTACATTCATTGTATTCAATGACAATATGGAGCATCATGCTCCTCTTAGTATATTGAAGAAATTAAAAGTCTTATGCTTTTATAGCATTTTTTAGCATGTCAATCAGTTGGATGAGTATACAGGTTAGTGTGCCTAATTAACCGGAAAGTGTCATTTGATGCAATTCTACGCCTTCTGTTCTTATTTTGACATTGCAAGTTCAAGCTCATAGGTTTGAATATGTTTCAGGTTGTAGCAATAAAGGTTATTCGTAATAAGCAAACTGGACAATCGGAGGGATATGGATTTGTAGAGTTCTACAGTCATGCTGCTGCTGAGAAAGTACTTGAAGGATTTGCTGGTCATATAATGCCAAACACTGACCAACCTTTTAGGATAAATTGGGCATCATTTAGCATGGGGGACAGACGTTCAGATATTGCTTCAGATCATTCCATATTTGTAGGCGACCTTGCTTCTGATGTCAATGATACCACATTACTAGAGACTTTCTCCAAAAGGTACTCCTCTGTCAAAGGTGCGAAAGTTGTTATTGATGCTAATACTGGTAGATCAAAGGGCTATGGTTTTGTGAGATTTGGAGATGATAACGAGAAGACACATGCCATGACTGAGATGAATGGTGTGTATTGCTCTACCAGGCCAATGAGAATTGGCCCTGCAACTCCCAGAAAAACCTCAGGTTCAATCACAAGTATCTAATTCAGTTCTTTTTTGGGGTCAACACTAGTACATTCATACCAAGCATTATTTGTTTAATAGATCCTTAATTTCAACGCTAGTACCCCTAAATTTGCGAGTCTTTCTGTCCATTAATGTAGTATAGCAGAAGATAGTATGGACTCTCTTTTTTTTTTTGAAGATATGGACTCTATAAATTTGCTGTCATGTACTATGGTTTCCTGTCACTGTTCACTCTCTAATTTTGTTAGCATTTTCCCCTTCCTTTTAAATTTCTCTTGTACTCTTTTTCAAAAAGAAAAATGTATATTTATTTAATTATTTTCATTCAGACTTTAGTTGTATTATCTTGAATTGTTCATCAATCTTTCAGCATCCCATATTTTACTTTTGCTCATATCTCCCTAATTTTTTTTAGGAATATAGTATCCTTCTCCATGCTTCTGAGTACATCATTTGAGTTAGTAATTGATGGTCTTTGGTGTTTGATGTCATTATTGTGTATATCATTTTTGCAATCTTCCGGTTTCATCTATAAGGTCCTACAATGCCTTTCCAACAAAATGCTACTTTCCCTGCATTTTCCCTTCAGAAGAACAATGAACAACACAATTTTAGTCTTTTCACACCTTGGAAATATTTTTATATTATTTTACCTAATTGTAATTTTGGATGAACATCGGACATGCTTGATATCTGTTAATTGTCGCAGATATTTTCAGATTTAACCTCGTGCTCGATTCATATATTATTCTTTTTAGAATACAGGGATTGGTTTTGAAAATCTGAGATAATTTAATATACCAAACCTGAGAATGATAGTGCATTATTGCCTTATAGAGTGAACAGTGGATGGGATAAAACTTGCTTTGACAATCTTATACAGGTGTTCCTATTAAGACACTTAATTCCTATTTTCTAACTATGTTTCTCGGTATAGGTACTTCTGGACCTACTGGTTCAGCTGCTCGATCAGATGGAGATTTGACAAACACAACTGTGAGTACAGATGTATTTGTATTTACCCATAAAGTCTTATGTGTATACGAATTTTTCCTTCTATAACCGTCCAGTAACTTATTGTAGGTATTTGTCGGTGGGCTTGATCCAAATGTTAGTGAAGATGACCTTAGGCAAACATTTTCGCAATACGGTGAAATTTCATCGGTAAAGATCCCAGTTGGGAAACAGTGCGGCTTTGTGCAGTTTGTTCAGAGGTAATTTCAACCCATATTTGTTTTCTAAGGGTAAATTTCCTCTGTTCCTGTCCCATTGACAAGATCTGATTAACATTGTCAATGTGTTCCTTTTTCCAGGAAGAATGCGGAAGATGCATTGCAAGGACTGAACGGAAGCACCATTGGGAAACAGACCGTGCGTCTTTCGTGGGGACGCAATCCAGCAAACAAGCAGGTACAATCTTCCCCCTTGCTACATTTCCACCAGAGGAACTGTAAAATTGTGCAGTAAACATAGGCAAAAGGACCTGAGACTCCATTTCTTGACCATGTACAGTTGAGGAGTGACAATGGCAGTCAGTGGAACAACGGGATGTTCTACGCAGCCTCGCCGTTTTACAGTGGATACGGCTACCCTGCACCGTTCCCTGCTGATCCGGGCATGTACGCTGCTGCTTATGGCGCCTACCCGTTCTACGGAAACCAACAACAAGTGAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030924