BGIOSGA030925

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030925| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030925, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA030925

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030925, complete gene.

LocusTag

OSJNBB0019B14.13

Ensembl Transcript ID

BGIOSGA030925-TA

Ensembl Protein ID

BGIOSGA030925-PA

Length

4618

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16167708..16172325

Sequence Coding Region

16167708..16167779,16168449..16168577,16168677..16168793,16168915..16169364,16169484..16169851
,16169985..16170084,16170662..16170721,16170837..16170920,16171046..16171171
,16171291..16171580,16171938..16172040,16172281..16172325

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16167708..16172325 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16167708..16172325 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATGGCCGGGCTCGGAGGCCGGCGGCGGCGGCGCACGGCGCCAAGGCGGCCTCCACGAAGAGCGACAGAATGATGGAGAAGGATCAGAGGAAGGGCGCCATGCCGGTGAAGAAGGGATCATCGGCCAACGCGGTCACCAAAGGCATCACGAACAGAATCCAAGCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTGGACAAGCTGAAGAAGAAGCTGAGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGAGGCCGCTCGGCGCTCTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAACACTGGCGCTTCTCGCGGAGGTGGCGGTGCTGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCCAGGCTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGCTTTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGAGGCTGCCCTACAGCGTGAAGCATGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACATGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGGCGGCGGTGGTGGTGTCGGTGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTGCCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCGTGCAGGTCCTGCCGTACGAATTCAGATTCAGCTTTTCCCTGCTGCGTGTTTCAGCCCTGATGATTGGGACCAACGGTAGAATCTACAGTACGACCGAGACAAGCTACAGGATCACCGTGGTCGTTGAAAATACTGTAAGATCCCTGGGGACCCTACACAGCCTCGTGTCGTATGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MNGRARRPAAAAHGAKAASTKSDRMMEKDQRKGAMPVKKGSSANAVTKGITNRIQARRERKLALQQDVDKLKKKLRHEENVHRALERAFTRPLGALPRLPPYLPSQTLALLAEVAVLEEEVVRLEEQVVNFRQGLYQEAIIFSSAKNTSLPGGEGCVPAQLMPSSPVPNSEVSPANCHSPPTRPSMNGVAGAKQTPRKPSPSAAVAQDDRSGAGKENQSCSNTPARNCRHSPLLQKASKSRLPTAAAPEKRRATAQTISTVPDRKRLADTVSNNSEKASQDDSSVPNRLSEELLRCLLAIFSQMGGSSASGQDEEQAALSPSVSGSCESSEDAYPQDPYGILEFGTRDVGSYKRFHVIDATSFDQTAMENDTMLTRKLKALIRRLSSVDLTGLSHQQKLAFWINIYNSCMMNAFLEQGIPTTPHMLVAMMPKATINVGGRTHSAMSIEHFILRLPYSVKHVNPGGVTKGAADDMTMRGVFGLEWPEPLVTFALSCGSWSSPAVRVYTARGVEEELEAAKRDYLQAAVVVSVPAKVAIPKLLHWYLLDFAKDVDSLMDWVCLQLPSELRQKAMRIVEDGRRGVAAESRRVQVLPYEFRFSFSLLRVSALMIGTNGRIYSTTETSYRITVVVENTVRSLGTLHSLVSYE</aaseq>

Gene Sequence

<dnaseqindica>1..72#742..870#970..1086#1208..1657#1777..2144#2278..2377#2955..3014#3130..3213#3339..3464#3584..3873#4231..4333#4574..4618#ATGAATGGCCGGGCTCGGAGGCCGGCGGCGGCGGCGCACGGCGCCAAGGCGGCCTCCACGAAGAGCGACAGAGTATGCTTCTCAATCTGGCAAAAACCTCTCTCGTTTCTCCGTGTGCTCTGTTCTCCCTTCTTTTATGGCCAATGTGCGGTTATTTTCGGTTCTCGCGATGGATTATTAAGGCGTCCTCGGTCGCCGGCGCTCGCGGGATCGGAAGGCGGCGCCTTTGCCGCCTACTTGAGGCCAGCTGTTCGAACTCGGTGCTTGATAGTTTTTTTTTTCTTTTTAACTCTCGTTTTTGGTTCCCAAGGTGTGAAATTCTGTGCGCCTATTTTGTTGTTTTGCATTGGTGGCGTAATGTGGTTGTTAGTGATTTGTTGCACCGTCGATGTGTTTCCTGTAGTACGACGGATTATTAAATGTTGTTGGGAAGAATACAAGGACGAACAGTGCTGTTTTGATGTTCTTGCGAGCTACGTTTTGGTTGGTGGTGTAGCGTGAGAAGATCTCGCCACTGACTCGCGGGCGTCAGTTAGCTTTCGAGAGCTACTCCGATAGGGTATCTCTTGATTGCTCTTGAGCCCGCATTTCTTCCCCTTCTTTAAATCAGCCGCTTTATCTCTTTATCTTTCGGAGAAGAGGAATCTGTTGCTTTGCTTTGCTTCGGTTAGCTTCTTTCACAGCTAAACAACGCCTTCTTTTTCCTCTTTTGATGATGATACTGTTGTTTTACGTGTTCAGATGATGGAGAAGGATCAGAGGAAGGGCGCCATGCCGGTGAAGAAGGGATCATCGGCCAACGCGGTCACCAAAGGCATCACGAACAGAATCCAAGCGAGGAGAGAGCGGAAGCTCGCACTGCAGCAAGATGTACTACCTGAATTCTGTCCCAATTTCTCGCAATTTGAGAAGCGCATTGGTTCGTCCGAGTTGTGTTTTGTGACGCAATTCGCTGCCTGGATTTTACAGGTGGACAAGCTGAAGAAGAAGCTGAGGCACGAGGAGAACGTCCACCGAGCCCTCGAGAGGGCGTTCACGAGGCCGCTCGGCGCTCTGCCTCGCCTGCCGCCGTATCTGCCATCTCAAGTCAGTGCCACATTTGCATTCGCATTTGCATCAAACGAAACGCATTGTTCTTGCTCTGCTTGGGACAATTCGGCTCTGAATTCTGAACATGTTCCTGCTCTGAATTCTGCGATGTGCGAAGACACTGGCGCTTCTCGCGGAGGTGGCGGTGCTGGAAGAAGAGGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATAATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAGCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCTCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCTCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGCAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCCAGGCTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGGTAAAAACAGTAGTAATAAGATCCTTATTGCTGCTGAATGGTATTTATTTACACATTTTTCTACCATGAACTAACTTCTTCTGAACCGTACTGCTGCTGCATTTTTTTTTATCACACAGACGATTAGCACAGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAAGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATCTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCTCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGCATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCCACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGTGCGTTCTTGCTAGTGCAATTTTCCGTTCAGTTATTACAAGCTCGGTTTGGTTGTCTGTCGAGTAGGTGGCCGCCTGACATAATTAGCATCGCTGATAGAGGTGGTTCATGTCTACCTGGCAAAATCTGCAGGGCTTTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCATTCTGGATCAACATCTACAATTCGTGCATGATGAATGTAAGCTGTCAGCCTGTCACTCATAATTGAGCCCACCCATCCTGAATTTCTTCATCTTGATCAATTATATCTTTGTTCATTTTCTCGTTAGAGGGAAATTTCCATTTCGGTGATAGTTACCTCCTCCGTTATCAATGTTTGCCTCCGATAGAATGACAGAAGAACTACTGTATGCTGGAATATTTCGGGAGGTTAATTACTTACTACCGCATTGCATATTACTAGTACTATATAGTACAGCCAGTACAACATTACAGCATGGGCGTGGTTCTGACGAGTACGTTCTTTAACCATGAACTCTGAACATAGTGCTGGCATGTCTGTGTACTGTTCTCTTCAGTCATTTAGTTTTGCTTAAAGAAATGCTTCCTGTCCCCATGACCATAAACAAAGGCTTTAACTAACACTGATCACCATCATCATCGCTTTGGCATTATTATCCTTAGGCCTAACTATCTCATGCCATCTGCGATACGGCCTAGGAAAGGGTAGTTAAGGTAGGTAGATGTAGTAGTGTAGTGTCATGCCTAGTGCCTCATACTTGTCCCTAACACTTGTCTTCCTTGTCGTACTGCAGGCATTTCTCGAGCAAGGGATACCTACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGTATAGCACTAAGTAACTTCTTGCAAGCAGCACAAATCATGATGCGCCGGTGATTAACGAAGTAATCAAGTCTCTGACGAGAGAGTGATCTCCGTGTTTCGCTCTCTGTTTTCAGGCGACAATAAATGTGGGTGGGCGCACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGAGGCTGCCCTACAGCGTGAAGCATGTAAGGCGTTACAGTATAGTTTTGTCATGGTGGATACGGCCATCGTAGTGATCCGGGTAGATTGGTGTTCCGGTTGCACAGCACCACACGCTAAAACTAACCACCTATGGCTCGTGAATGAACAGGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACATGACGATGCGAGGCGTGTTCGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCCCCTGCTGTAAGATCTCCATGATCCCGTCAGATTTTTGCAGCATTACAGCATGTAAAAATTCCGTGTAGTTTGTGATGATGTGTTGTGTGATTGTGTCTTGTTCTTGGTCATGTTTTTTTTTTCAGGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGGGACTACCTGCAGGCGGCGGTGGTGGTGTCGGTGCCGGCGAAGGTGGCGATCCCGAAGCTGCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGCCTCCAGCTGCCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGGGGTGTCGCCGCCGAGTCGCGCCGCGTGCAGGTCCTGCCGTACGAATTCAGATTCAGGTACCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAATTCGAGGGTGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTTCGGTGATGTGAATGAATGAAAGGAAGTATAAAAGGTGTTTCCACCAGACCACGACTACTCCAGTTGAGATCGAGTACCGGTCGCTTCTTCTTTCCCTTCCTTTTCGTGCTTGGAAGAGATGGTACTCCAGTACTACTACTCAGCTTCTGTACACAGGCCTGTCAGACTTGTTGCTAAAAAAGCGAAAGGCGCCATGGCATGCTGTCCTGTCAGCAGTCACAGTGATTAACCTGACCCTGCAGCTTTTCCCTGCTGCGTGTTTCAGCCCTGATGATTGGGACCAACGGTAGAATCTACAGTACGACCGAGACAAGCTACAGGATCACCGTGGTCGTTGAAAATACTGTACGTGTCACTAGCTTACAGCCACCGACGGGATAATCACACGGTTTCACCGCCATTAAACGACAGGGAGGGAAGCTAGCTGCCGTTGGAGTACACTCAGGTTTAGTTCACCCCAACTACCCCAAACTTCAAACTTTCCATCACATCACATCACATCTAAAACTTTTCTACACACATAAATTTCTAACTTATTTTTTTAAATTCCTAATTTTCTCTAAACTTTCAACTTTTTCCAATCAGGTAAGATCCCTGGGGACCCTACACAGCCTCGTGTCGTATGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030925

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030925&oldid=30129"