Os10g0561500

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0561500| Description = Protein kinase-like domain containing protein| Version = NM_001071919.1 GI:115483433 GeneID:4349386| Length = 4775 b...")
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Gene Name

Os10g0561500

Description

Protein kinase-like domain containing protein

Version

NM_001071919.1 GI:115483433 GeneID:4349386

Length

4775 bp

Definition

Oryza sativa Japonica Group Os10g0561500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22592233..22597007

Sequence Coding Region

22592832..22593012,22593115..22593233,22593508..22593629,22593708..22593904,22594205..22594458
,22594634..22594735,22594831..22595259,22595466..22596224,22596441..22596626

Expression

GEO Profiles:Os10g0561500

Genome Context

<gbrowseImage1> name=NC_008403:22592233..22597007 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22592233..22597007 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatccaagataaagttgagaacaacgacccaactgtgactgttgggttggccgtgagtagttccaaatccagtaagtacgccgtgcagtgggctgtgaaaaacttctgcaccaatgggatggttaggttcgtgcttatccatgtactgcagaggatcaccacggttccaacaccgatgggcaactatatcccgattgataaagtacgggctgacattgccagcgcatatgtgaaagaagtcgaatgtaaggcccgaacgatgctccttttctacaagaacatgtgtgatgagaaggctaaagctgaagtactggttgtcaaaggtgaagatgtggcagaaaccatttccaatgttgtttcaatgtacgaaatccacaagcttgttgtcggtgactcttctcagggcaactttattaggaaatccaagggtactaggacatcttctcaaatttgcagaagtgttccaagcttttgtgcagtttatgttgtctcaaaaggtggtttatccgcagtttattctcctggatttgaaggtcacaagagttctgagctattcctgtccagtgatagctccaaaactgaaatccattcagatgataagccctcattatcagatgccacaccttcgagaagctttagatcaaacttgacatgggagaatctggaaagtttatcatccgcagaccatgatagaccgcgctccttacatgagtatcttactgaaagcacttcagcatctgttggtgataataacagtaattctccatgtgctagcggtcaaacccctcgaccaagtaacgtgcttatctcagataaagctccaatgacaagcagtcccctgcaggaattgatgctttcagaggacatggatgatgtaaatagcgagcttgaaaagctgaggcttgaacttaggcatattaaaggagtgtgcaaacttgttcaggatgagtccatcaatgcttctcagcatgtgactgacttagctgcaaaacgtgctgaagaggaagcccggctcagcgaggtctactccaggatcaacagagtcaatgagcaagcacatcaagagaaggaacaactgaacgctttggaggctcagtgcaggcatgtgagggatcttgcaagaaaagaagctttgcagaagcagattttgcagctgaggacttcgaaggaggctgataagatgcaaaggctggaaaaacttcttgaattagatgggatgtcatactcaacatttacatgggaagacattgaatctgctacatcatcgttttcagaggcacttaaaattggatcaggatctaacggaacagtgtacaagggcaatctacgtcagacatctgttgccataaaagtcctcacttctgacgacagccacaggatcaaacatttcaaacaagagcttgaggttttgggtaagatccgtcacccacatctgctgctgctcataggtgcctgtctggacagaccatgcttggtgtacgagtacatggagaatggcagccttgaggatcgcttgcaactcaaaggaggcacggccccactcccatggtaccaacgtcttcgcattgcttgggaaatagccctggcccttgtctacctccacagctcgaagccgaagccaatcatccatcgtgacctcaagcctgcaaacatactccttgatagcaatttcaccagcaagattggcgatgtgggcctttcaacattgcttccgctgggggatgccttgtcgacaacgcgcacaattttcaaggacacagatctagttggcacactgttttacatggacccagagtaccaaaggacaggccaagtgtcaacaaaatctgacacatacgccttgggcatggttttattgcagctgctcactggaaagccacctgtggggctagcggaccttgtggagcaagcagtagaaaatggtcaccttgttgacatcttggacaagagtgctgggaagtggcctgcacaagaagcacatgagctagcgcagcttggcctaagctgtttggaaatgcgaagcaagcatagaccagatctgaagtgtaaggttcttgtggagctggaacggctgaaaaaaattgccagtgctgtctctgaccctgtacggccagtgatatctggaccaccaagccattttatctgcccaatactcaagaggataatgcaggacccatgcattgcatctgacgggtactcgtacgaccgggtcgctattgagatgtggttgtgcgagaatgacaagtcaccgattacaaaatcgcggcttcctaacaaggatttggttcccaaccatgctctgttatgtgcaattacaagttggaaggcagaagcaagggactga</cdnaseq>

Protein Sequence

<aaseq>MAIQDKVENNDPTVTVGLAVSSSKSSKYAVQWAVKNFCTNGMVR FVLIHVLQRITTVPTPMGNYIPIDKVRADIASAYVKEVECKARTMLLFYKNMCDEKAK AEVLVVKGEDVAETISNVVSMYEIHKLVVGDSSQGNFIRKSKGTRTSSQICRSVPSFC AVYVVSKGGLSAVYSPGFEGHKSSELFLSSDSSKTEIHSDDKPSLSDATPSRSFRSNL TWENLESLSSADHDRPRSLHEYLTESTSASVGDNNSNSPCASGQTPRPSNVLISDKAP MTSSPLQELMLSEDMDDVNSELEKLRLELRHIKGVCKLVQDESINASQHVTDLAAKRA EEEARLSEVYSRINRVNEQAHQEKEQLNALEAQCRHVRDLARKEALQKQILQLRTSKE ADKMQRLEKLLELDGMSYSTFTWEDIESATSSFSEALKIGSGSNGTVYKGNLRQTSVA IKVLTSDDSHRIKHFKQELEVLGKIRHPHLLLLIGACLDRPCLVYEYMENGSLEDRLQ LKGGTAPLPWYQRLRIAWEIALALVYLHSSKPKPIIHRDLKPANILLDSNFTSKIGDV GLSTLLPLGDALSTTRTIFKDTDLVGTLFYMDPEYQRTGQVSTKSDTYALGMVLLQLL TGKPPVGLADLVEQAVENGHLVDILDKSAGKWPAQEAHELAQLGLSCLEMRSKHRPDL KCKVLVELERLKKIASAVSDPVRPVISGPPSHFICPILKRIMQDPCIASDGYSYDRVA IEMWLCENDKSPITKSRLPNKDLVPNHALLCAITSWKAEARD</aaseq>

Gene Sequence

<dnaseqindica>600..780#883..1001#1276..1397#1476..1672#1973..2226#2402..2503#2599..3027#3234..3992#4209..4394#gcgctgctgtttttttccccctcctcggcggcgattccactgcctcgccgtcgccggagttggagaagaaggcggcggcggcggcggcgcagaaaggtgaggcctctcgaccgaatccctttccccttcccgtcttccgccccgcgcagtcagcagcaacagacgaaggaatgcggtgcgaatgcttgcgagtagagaaatcgatttctggctgccgttcatctgcgcgttttgttgcgcgcgcgcgcgcgcgagggagggagggagatccagtaaatggcgccttgtcccgttgcttgctcgatcctcctgccggccgtgggggtttttgcccccgattggttccgataatttgtcccgtgttgtagatggtgaatcggtgatgaccaagggttaccttagatgataggaaatgattaggagtagcgtatttcctcgtgattactggagctgatacaatgcaggatatttttagcgctgatttgtaacatggcaggattaatataccattgttgtgctgttgatcacaccatatttcccttatgcagggtattttgtattagggatataggcaatgcaaaactgcaagctgcaaagccatggccatccaagataaagttgagaacaacgacccaactgtgactgttgggttggccgtgagtagttccaaatccagtaagtacgccgtgcagtgggctgtgaaaaacttctgcaccaatgggatggttaggttcgtgcttatccatgtactgcagaggatcaccacggttccaacaccgagtgagtgcatatttgatgtgtttcctactgtgtagatgtatactttcgtttgtaaatcatgttgtcacttaaatatatctatttttcttgcttcttttgtagtgggcaactatatcccgattgataaagtacgggctgacattgccagcgcatatgtgaaagaagtcgaatgtaaggcccgaacgatgctccttttctacaagaacatgtgtgatgagaaggtatgacgttgccacttcaggccatcctttttttcttttccgttccaaaatgaacattcctaagggcacactggagccaaatataatgaaatacaactgaataagcacaattcacaacagtatttattcaggacatttcataatgttaattttgttcagaattgtactttcgtatagagtcagaaattatgagaacaggttagaactcagcaatgatactcatagttttaaacatcctgctgaacatgtgtatacattttctgatcttgttcaggctaaagctgaagtactggttgtcaaaggtgaagatgtggcagaaaccatttccaatgttgtttcaatgtacgaaatccacaagcttgttgtcggtgactcttctcagggcaactttattaggtacttaacatgttctgtaataaataatggtgaactgcatgcatcaaaatgctgattaatttggtggaaatgtcttaggaaatccaagggtactaggacatcttctcaaatttgcagaagtgttccaagcttttgtgcagtttatgttgtctcaaaaggtggtttatccgcagtttattctcctggatttgaaggtcacaagagttctgagctattcctgtccagtgatagctccaaaactgaaatccattcagatgataagccctcattatcaggtgaagttatctgtccgtaaaactggcactggaaattttcactgtgtactgtatagacgataacataatgactgcttccaactttgaaccttttcgtccttggtactctttgaagctgatatagaatggatctttgctagtctttgagaagtttgtagcacctagcttccttttcaaatgtttgcttggttctttgcattcaataagaatttggaatcgaggtcgtttggttttgaaattcagcaaaaaagaaaagaaaaaaaaacagtgcaagaaatttatcccttttgtccaatgcagatgccacaccttcgagaagctttagatcaaacttgacatgggagaatctggaaagtttatcatccgcagaccatgatagaccgcgctccttacatgagtatcttactgaaagcacttcagcatctgttggtgataataacagtaattctccatgtgctagcggtcaaacccctcgaccaagtaacgtgcttatctcagataaagctccaatgacaagcagtcccctgcaggaattgatgctttcagaggacatggtgagccatttgattttttcacagtaaaactgtaataaattttttcacagtagtataattttgcaaatgatacatctttgatgaattgaggatgagccttcactgtttaaacttcttagataagaatagttccttttttttctgaatatacagtaacttaattttctcaatgcaggatgatgtaaatagcgagcttgaaaagctgaggcttgaacttaggcatattaaaggagtgtgcaaacttgttcaggatgagtccatcaatgcttctcagcatgtaagtttgggagtactgtgtttcaacataattagttggttactttatctccaatagtcagcaacttaattgtcatcttgacaatcatatgttaggtgactgacttagctgcaaaacgtgctgaagaggaagcccggctcagcgaggtctactccaggatcaacagagtcaatgagcaagcacatcaagagaaggaacaactgaacgctttggaggctcagtgcaggcatgtgagggatcttgcaagaaaagaagctttgcagaagcagattttgcagctgaggacttcgaaggaggctgataagatgcaaaggctggaaaaacttcttgaattagatgggatgtcatactcaacatttacatgggaagacattgaatctgctacatcatcgttttcagaggcacttaaaattggatcaggatctaacggaacagtgtacaagggcaatctacgtcagacatctgttgccataaaagtcctcacttctgacgacagccacaggatcaaacatttcaaacaagaggtattccttgaaccattaaaggttgagcagtcaagtcctaatatcatcatgatctccggatcttcagatatattcataggctaagaagtaaattgcgataactttgctatgttcaaatatgcagtgctactcttcttgcatatataatgcaagatgccatcattgttatctctaggaaattcttataagatgcccctgttctgcagcttgaggttttgggtaagatccgtcacccacatctgctgctgctcataggtgcctgtctggacagaccatgcttggtgtacgagtacatggagaatggcagccttgaggatcgcttgcaactcaaaggaggcacggccccactcccatggtaccaacgtcttcgcattgcttgggaaatagccctggcccttgtctacctccacagctcgaagccgaagccaatcatccatcgtgacctcaagcctgcaaacatactccttgatagcaatttcaccagcaagattggcgatgtgggcctttcaacattgcttccgctgggggatgccttgtcgacaacgcgcacaattttcaaggacacagatctagttggcacactgttttacatggacccagagtaccaaaggacaggccaagtgtcaacaaaatctgacacatacgccttgggcatggttttattgcagctgctcactggaaagccacctgtggggctagcggaccttgtggagcaagcagtagaaaatggtcaccttgttgacatcttggacaagagtgctgggaagtggcctgcacaagaagcacatgagctagcgcagcttggcctaagctgtttggaaatgcgaagcaagcatagaccagatctgaagtgtaaggttcttgtggagctggaacggctgaaaaaaattgccagtgctgtctctgaccctgtacggccagtgatatctggaccaccaagccattttatctgcccaatactcaaggtattttttggcttattgcaatacatcagctttaagtgaattacatcacaactacctgtagctcattgtcttgtaagaatgtttctgtttcagaatttgaactatattacacttcaaggtggtctgtaattcaactttttactcttaccttgttgtatccatttttttcgaagggtctgaggtgaaacttcattttgctttttttcctccctgtagaggataatgcaggacccatgcattgcatctgacgggtactcgtacgaccgggtcgctattgagatgtggttgtgcgagaatgacaagtcaccgattacaaaatcgcggcttcctaacaaggatttggttcccaaccatgctctgttatgtgcaattacaagttggaaggcagaagcaagggactgattgagtgattgtgctaggtaacttctctaacttcacatggatacggcactcgaaggctgatgatgtacatgtttttgccttggtgatggcctccttaatctctaatactgtagatactgcggtaatgttcttgtaaagcagcagttttgcagcattttcatagaccatctctgagataaattttgaagggtttagagtaggagtatcaagaaggtcattttgtaggttggaccagcagaaagtacagtagtacacttctacagtattgctttgtgatagtttatacatatacatcgaaaggataggaaattcctcttactttcttatcttagtattgtgatgactactctataaatttaagagttgagacaaatttccggc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0561500, RefSeq:Os10g0561500