BGIOSGA030935

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030935| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030935, complete gene.| tag = P0676H0...")
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Gene Name

BGIOSGA030935

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030935, complete gene.

LocusTag

P0676H02.7

Ensembl Transcript ID

BGIOSGA030935-TA

Ensembl Protein ID

BGIOSGA030935-PA

Length

5866

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16429545..16435410

Sequence Coding Region

16429545..16429814,16433606..16434147,16434302..16434388,16434500..16434556,16434657..16434895
,16434973..16435091,16435199..16435285,16435363..16435410

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16429545..16435410 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16429545..16435410 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGTCCCGCTCCTCGCGGAGTGGCCGGCCGGGAAAGAGAAGGAGGAGGGGCGCGTCCGGCGGCGGCTGCCGGCGTTGGCGAGGGAGGCGTGGGAGGAGTCCAAGAAGCTGTGGGAGATCGTCGGCCCGGCCGTGTTCCTGCGGCTGGTGCTGTACAGCTTCAACATCATCAGCCAGGCCTTCGCCGGCCACATCGGCGACCTCGAGCTCGCCGCCTTCTCCATCGCCAACAACGTCATCACCGGCCTCAACTTTGGCTTCCTGCTGGGCATGGCTAGTGCACTGGAAACACTCTGCGGCCAGGCCTACGGCGCAAAGCAGTACTCCATGCTTGGCATCTACCTACAACGTTCTTGGATCATCCTCTTCGTCTTCGCCGTGCTCCTCGTCCCGACCTACGTCTTCACCGCCCCGCTGCTCGAGGCGCTGGGCCAGCCCGCCGCGCTGGCGCGCAAGGCCGGCATGGTCAGCGTGTACATGCTCCCGTCGCACTTCCAGTACGCCGTCCTCCTGCCGCTCAACAAGTTCCTGCAGAGCCAGCGCAAGAACTGGGTCACCGTGGTGACCGCGGCGGCGGCGTTCCCGGTGCACATCGCGGTGAGCTGGCTGCTGGTCAGCCGCCTCCGGTTCGGGGTGCTCGGCGCCGCCATGTCGCTCGGTGTCTCCGGCTGGCTCGTCACGCTGCTGCAGCTCGCCTACGTCGTCGGCGGCGGGTGCCCGGTGACGTGGAGTGGGTTCTCCCCGTTGGCGTTCGTGGATTTGTGGGGTTTTGTCAAGCTGTCCGTCTCGTCTGGAGTTATGGTATGTTTGGAGACTTGGTACTACAAGATACTGATCCTGCTCACAGGACACCTGAAGAATTCTGAACTTGCAGTGAATGCTCTTTCTATCTGTATGAGTTTTCAATCTTGGGAGATGATGATTCCAGTGGGATTCTTAGCCGGCACCGGGGTGCGAGTGGCTAACGAGCTTGGCGCGGGCAACGGGAAGGGAGCAAAGTTCGCGACGATCGTGTCGACGACGACCTCCTTCCTGATCGGCCTCTTCTTCAGCGCGCTGGCGCTGGCCTTCCATGACATGATAGCGCTCGTCTTCTCGTCGAGCAATGCGGTGATCGACGCCGTGGACAACATCTCCTTTCTTCTAGCCGTCACCATCCTCCTCAACGGCGTCCAACCTGTTCTTTCAGGGGTTGCTATTGGTTCAGGGTGGCAAGCGGCAGTGGCCTATGTAAACATCGGATGCTACTACTTCATCGGAGTTCCTATCGGTGTTCTGCTTGGTTGGAGTTTCAACCTTGGAGTTCTTGGAATTTGGGCTGGAATGATCGCTGGCACTGCAATCCAGACTATAATTCTGGCGCACATGACCATTCAGTGTGATTGGAACAAAGAGGTTTTGCAAGCAAGTGAACGCGTCCAAAGATGGGGGAACCCAAAATGA</cdnaseq>

Protein Sequence

<aaseq>MASVPLLAEWPAGKEKEEGRVRRRLPALAREAWEESKKLWEIVGPAVFLRLVLYSFNIISQAFAGHIGDLELAAFSIANNVITGLNFGFLLGMASALETLCGQAYGAKQYSMLGIYLQRSWIILFVFAVLLVPTYVFTAPLLEALGQPAALARKAGMVSVYMLPSHFQYAVLLPLNKFLQSQRKNWVTVVTAAAAFPVHIAVSWLLVSRLRFGVLGAAMSLGVSGWLVTLLQLAYVVGGGCPVTWSGFSPLAFVDLWGFVKLSVSSGVMVCLETWYYKILILLTGHLKNSELAVNALSICMSFQSWEMMIPVGFLAGTGVRVANELGAGNGKGAKFATIVSTTTSFLIGLFFSALALAFHDMIALVFSSSNAVIDAVDNISFLLAVTILLNGVQPVLSGVAIGSGWQAAVAYVNIGCYYFIGVPIGVLLGWSFNLGVLGIWAGMIAGTAIQTIILAHMTIQCDWNKEVLQASERVQRWGNPK</aaseq>

Gene Sequence

<dnaseqindica>1..270#4062..4603#4758..4844#4956..5012#5113..5351#5429..5547#5655..5741#5819..5866#ATGGCGAGCGTCCCGCTCCTCGCGGAGTGGCCGGCCGGGAAAGAGAAGGAGGAGGGGCGCGTCCGGCGGCGGCTGCCGGCGTTGGCGAGGGAGGCGTGGGAGGAGTCCAAGAAGCTGTGGGAGATCGTCGGCCCGGCCGTGTTCCTGCGGCTGGTGCTGTACAGCTTCAACATCATCAGCCAGGCCTTCGCCGGCCACATCGGCGACCTCGAGCTCGCCGCCTTCTCCATCGCCAACAACGTCATCACCGGCCTCAACTTTGGCTTCCTGGTAAGTGGAAATTAATTAACTCCCTAAGCTAATCATATATCTTGCTGCATTACGACTATATTCTGTTTATTAGTATATTCTTGCACTCGGGACAATCACTGTTGCTCGATCTTTGCGAGTGTATATATGTATGCCCCTCTGAACTTTAACTTGCAAATTTTGGGAGCATTTACCATTTAGATTACACTTACATATGTTTGTATACATGGGTGAAACTGTCTCGGTAATTGGTGATGAAATTAATAATCATACACTATATTTTGAAACATACAAGCCATTTTCTAATTGACAACATGCATACTTGTGTTTGTTAATTAATTGAGGCACATTCATATACCACGGCGTGACGCATTTATTTTGCAATATTCAAGATCAAGAATGTGCTTCTGCCAGTTGATCCCGTCCTACGATATTTGCAAAAACACGAACAAAAGAATGCTCTCGTGGAAGGACTCATGGTGTATATCATACTTATACAAGGTACAAGTAAAACAGAAGAAAACTGAATGCGTGACTGTTACCCCTTAGAAAAATGGGCACGGTGATCAGGTCTTGCTGCAAACAATTGCCACTAGTTCTATACAAACATGGCCAAATAAAAGAAGCCAATTGAGTAAAATAAATCCGTCGAGTCAACTTAACTGATCTGGTTTTTTCTCCAAAAAAAAAACTGATCTGATTTTTGATTGGTTCAAAACTTCAAACAAAACTATTCGGTTCGTACAACATGTGAGCTGTTGCGAATTTGTGCGCTTCATGTAGCATTTGTAGCGTGCAATTTACACTAGCTGCACACTCCAGGAAAAGCAAGACGCCATGACTAATAGCATCACCAACCACCAACAGATGCCTAAAAATGTATCCCCTAATTAATTCTGATTCCTAATCAGATTTTATATGAATAGATTCTCTCCTCTAACATATATCTTAAAAATTGACTCAATAATAAAAAAGTACATTCACCATGCCAATAGAAGTAACAAAAATAGCTCTCCACCTCCTCCAGGACGCGATCCAACCCCCACGCATCACTCGGTTAGCACCACATCAGCTATATTAGAAGTCGGCGTGCTTTCTTACTAGGAGAGAGTGATCAGAAGGATAGGGAAGGGGATTCCAATTTTTTAGCACCATTTTTGAGCACCTAACAAGGGAAATTATCGCAGACTAACTTTTATAGAAACATGAAAATTAAGGATTGAAAAGCATATTGGGCATTTGTTAATGATGTTCTCAATACACACGTTAAAACCAAACTAGGAAGGTGGCCCGCGCGTATGCGCGGACACTTATATTATTAAAATGTAAGATTATTGTTTGTTCATAGATTAAGGGCAAAGTAAAGTTTGGATGATGCTATTTTATAATAATTTAAAGGATCTATTTTTCTTAAGATATCTTAAAAAACCATTCACAAACTTTTGAGTAGGAGATGGTTCAAGTACTTACGATTTTTGAATCATGTTTCTTTTTTCTCGAGTAAATAAGAAACTATTGCTAGTTAATTATCATATAGTCCATCTATATACATACCGTGTAGTATGGCCGCAAATGAAAAATGCAAGTGCAAGATACTCAAAATTCTTTTAATTAAATCGTCTCATGAAGGAGTATGATATAGGAATAAAGGGAGGGAAGCATATGCATGGGAAAAAAAGAAGGAGAAAAAATGAAAAAAAGGGAGGGGAAGCGTACGTAGGTGCGTACCTATGCCGCGGGAGGATAGGTGGGACCCATGGTATTTAGTTTGTTTTAAGATCGATTTTATCTAACGGTGTATAATATTGGACCCACCAATTTAAGTGAAAATTAAGGGGCATATATTTTTCTTTTTTCTTAGAATTTCTAGGATTTTCTCTATTTTATTAGAGCGCCACTTGACGGCTTGAGTGCGTTTGTAGGAAGTCTCATGGACTTTTAATATATAATAGATTCATGTCTCCACTACTATTTTCTAGTTGTCTTTTAGAAACTACTATTTATTGGAACTTATACCCCTGATATTTTGAAAACTATTTTTCCATGCTGGCTTTTTTAGATTTTAGTCTTTTTAAAACTTATTTTATAAATAAATCTCTGAAAAAACTTATTTAAAAAATGGACTATTTTTCTCGGCACCAGGGTTTTAATGTCTTGGCACCGATAACCTCGTCCCGCGTGGTGGCTAAGTTGCTGACTTGGAGGGGTTGTCGTCGAGGACCTATTGTAAGTTATTTCTTTTTGAAAATAGTCGAAATGTAAGGATTTTTCTTACGAATAGGCCCTTGGCTCTAGCCTCTTTTGCATCGAGGGCCTATCTGCATTCTTACCCTTTCCATAAAAATTATTCTATAAATGGGTTAGGCTGCTAGGGGGTCAAGGGTGTCAGCACAAGTGTTGTGGGCTCTGAGATGTTGGACATCAGCAGAAGGGTCACTGGCGCCGATAAAAGGATCCATTTATGAAATAAGTTTGTCAAGAGATCTATTTATAAAATAAGTTTTCAGAATAAGCCAAAATGTAAAAATTCAAATCCTACCATGAGGGTGCACTCCATAAATACTTCACAAATCTTTAACTATGTATAATTTATAACATAAGTGTTTTAAAAACATGAAGACCATATGCATAGATTTTTATTAAAAGGTACTTCAACAAAATAACATATTTATTGATATCTAATATATTGAAATAAAAAATGAGTGGTCAAAGTTGATTCTTTAGAGATTGTGTTCTTATCCAAAATGATAAGGATTATCAATCCGGAAGGAGTAGAAGATAATATTGTACTTTAGAGTTTAGACGAAGGTGATTATATTTAGATTGATTTATAGTTCTTGAACAGTACGGGGAAATACCATCATAATTTTAAATGTTACTAACACCGTCATAGGTTGAACATTGGTATTAAGAACTTGATAAAATTAAATAAGGATATGTTGTGATTGGTTAAGAAAACCAAATTTGAATGGCGAAAGGCTATGATTGGAATGGAGGTGAAAAGGTTGATATATTTTGTGATACTTTTTGAAGATTTTAAGTTGTTATATTTTGAAATAGAGGGAGTACTATTATGTGTTACCTTGTGCAAACTTAGGGCTGGAGGTATCGGAGATATCAAAACTTTATACTGCGTTAGAAAATGTCCCGGTACCTTACGTTTTTTTTAATAGATGATGCTGTTAACTTTTGACCATATAGTTGATCAAAGACAAATTAAAATACAGTACTAAAACATTAATGTCCGTACCTTCATGTTAGGTTTAGTCCCACATCGGTAATTGATGATGGAGAAGTACAACTTAAAAGGTGGGGGCGGTTCTCATCCATCAGACTAGTCTTTTGGGTTGTGTAAGCCTAGGACCCAACAATCTCCCCCGTCACCAGGGTTTACCTTACCACCGGTAACCGCAGTAACCTCCTTAAATTCAAATAAATTTAAAAAATAATTTAAATTTTTGATAAATTTTGCATGGTTTTTCAAGATTACCGCGGTTACCGCGTGGTAACCGTGCTTACCGCCGGGGCTCGGTAACCCCGGCCCCGGCGGTAAGATAAACCCTGCCCGTCACACATCGGGCCCAGCAATCTCCCACGTCACATCAACCCATGTGACCCCGAAGACTTGTTACCTGGTCTCTCCACCATGTGACCCATGGAGATTGTTCCGGGTTCCAAACCTTGGGCTCTGATACCACTTGTTATAAAATCGGTCTCGGTGTTGTCATTGTGTTTTATCTCCTATTGTGTTTTTTCCGCGTTTGGTTTCCGATGTGATTTCGGGTCCGATTTTATAACACTTCATATGGCAGCTGGGCATGGCTAGTGCACTGGAAACACTCTGCGGCCAGGCCTACGGCGCAAAGCAGTACTCCATGCTTGGCATCTACCTACAACGTTCTTGGATCATCCTCTTCGTCTTCGCCGTGCTCCTCGTCCCGACCTACGTCTTCACCGCCCCGCTGCTCGAGGCGCTGGGCCAGCCCGCCGCGCTGGCGCGCAAGGCCGGCATGGTCAGCGTGTACATGCTCCCGTCGCACTTCCAGTACGCCGTCCTCCTGCCGCTCAACAAGTTCCTGCAGAGCCAGCGCAAGAACTGGGTCACCGTGGTGACCGCGGCGGCGGCGTTCCCGGTGCACATCGCGGTGAGCTGGCTGCTGGTCAGCCGCCTCCGGTTCGGGGTGCTCGGCGCCGCCATGTCGCTCGGTGTCTCCGGCTGGCTCGTCACGCTGCTGCAGCTCGCCTACGTCGTCGGCGGCGGGTGCCCGGTGACGTGGAGTGGGTTCTCCCCGTTGGCGTTCGTGGATTTGTGGGGTTTTGTCAAGCTGTCCGTCTCGTCTGGAGTTATGGTATGGTAAGTACAGAACCGTAATTAACTAGTTTCTAAGCGGCCAAACATTATTAACAGGGGCTTGGGATTAACTATTTTGACAAACTGCAATCTGCAAATGACCTACGAAATTTTGATGGCATGACTTCATCTCGTTGTCTCTGCATTTGGTCTGTAGTTTGGAGACTTGGTACTACAAGATACTGATCCTGCTCACAGGACACCTGAAGAATTCTGAACTTGCAGTGAATGCTCTTTCTATCTGGTAAATCCTCCCTCTCTGCCTTGCTCATGTTTCCATCAGATCATATCCGACCCTCTAAATTTATTTACAAACGTATTTGCCTAACCATCGTTACTGCATCTCCTTGAACAGTATGAGTTTTCAATCTTGGGAGATGATGATTCCAGTGGGATTCTTAGCCGGCACCGGGTAACTGAACTAACTGAAACAACATAAGTCACTACCCTGCACTCTAGTTTCAACCCACAGAATGGTTGTCTGAACTGAAAGTTTACCTATGAATCTCAAGGGTGCGAGTGGCTAACGAGCTTGGCGCGGGCAACGGGAAGGGAGCAAAGTTCGCGACGATCGTGTCGACGACGACCTCCTTCCTGATCGGCCTCTTCTTCAGCGCGCTGGCGCTGGCCTTCCATGACATGATAGCGCTCGTCTTCTCGTCGAGCAATGCGGTGATCGACGCCGTGGACAACATCTCCTTTCTTCTAGCCGTCACCATCCTCCTCAACGGCGTCCAACCTGTTCTTTCAGGTACATTTTGGTACACCCTGCACACAGGTTTACAAGTGCAACCACACCTGAATTTGTGTGCGCCTGTCAATTTGCAGGGGTTGCTATTGGTTCAGGGTGGCAAGCGGCAGTGGCCTATGTAAACATCGGATGCTACTACTTCATCGGAGTTCCTATCGGTGTTCTGCTTGGTTGGAGTTTCAACCTTGGAGTTCTTGTAGGGTTCCAATTTTGATATCCCCATACTTTTCTCCTTTCCAAAGTACACATGGATTTTTGCTCTTTGATTATACTTTGTCATTTTATTTCTATGTTCATGTGCAGGGAATTTGGGCTGGAATGATCGCTGGCACTGCAATCCAGACTATAATTCTGGCGCACATGACCATTCAGTGTGATTGGAACAAAGAGGTGGGTCGATTTCAAGCCTATTTGTTAACTCTAGTACATTCAAATATGAACTTGTCCAACTTGCTGAATTTTTGCAGGTTTTGCAAGCAAGTGAACGCGTCCAAAGATGGGGGAACCCAAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030935