Os10g0561800

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0561800| Description = contains InterPro domain(s): IPR001356, IPR012287, IPR003106, IPR006712, IPR009057| Version = NM_001071921.1 GI:11548...")
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Gene Name

Os10g0561800

Description

contains InterPro domain(s): IPR001356, IPR012287, IPR003106, IPR006712, IPR009057

Version

NM_001071921.1 GI:115483437 GeneID:4349388

Length

1490 bp

Definition

Oryza sativa Japonica Group Os10g0561800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22607946..22609435

Sequence Coding Region

22608034..22608232,22608321..22608664,22608760..22609152

Expression

GEO Profiles:Os10g0561800

Genome Context

<gbrowseImage1> name=NC_008403:22607946..22609435 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22607946..22609435 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatgatggttcatgggaggagagacgagcagtatggcgggctcaggctcgggcttgggcttgggctcagcctcggcgtcgccggtggtgcagccgacgacgagcagccgccgccgcgccgtggtgccgccccgccgccgcagcagcagctgtgcggctggaacggcggcggtctcttctcctcgtcttcctccgatcatcgggggaggtcggcgatgatggcgtgccacgacgtcatcgagatgccgttcctgcgggggatcgacgtgaaccgtgcgccggcggcagagacgaccacgacgacggcgagggggcccagctgcagcgaggaagacgaggagcccggcgcgtcctcccccaacagcacgctctccagcctcagcggcaagcgcggcgcaccatctgccgccaccgccgccgccgccgccgccagcgacgacgaggactccggcggcggatcccgcaagaagctccgcctctccaaggaccaagccgccgtcctcgaggacaccttcaaagagcacaacaccctcaatcccaagcagaaggcggcgctggcgaggcagctgaatctgaagccgcggcaggtggaggtgtggttccagaacaggagggcgaggacgaagctgaagcagacggaggtggactgcgagctgctcaagcgctgctgcgagacgctcaccgacgagaaccgccgcctccaccgcgagctccaggagctccgcgccctcaagctcgccaccgccgccgccgcgccgcaccacctctacggcgcccgcgtcccgccgcccaccaccctcaccatgtgcccctcctgcgagcgcgtcgcctccgcagccaccaccacccgcaacaactccggcgccgcccccgcgcggccggtgcccacccgcccgtggccgccggcggcggcgcagaggtcgtcggcgtag</cdnaseq>

Protein Sequence

<aaseq>MEMMVHGRRDEQYGGLRLGLGLGLSLGVAGGAADDEQPPPRRGA APPPQQQLCGWNGGGLFSSSSSDHRGRSAMMACHDVIEMPFLRGIDVNRAPAAETTTT TARGPSCSEEDEEPGASSPNSTLSSLSGKRGAPSAATAAAAAASDDEDSGGGSRKKLR LSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDC ELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCER VASAATTTRNNSGAAPARPVPTRPWPPAAAQRSSA</aaseq>

Gene Sequence

<dnaseqindica>89..287#376..719#815..1207#ccctcagtccctcacctccatttccatcaagcccaagaacgaactcaccacgctagtgttgagaagtggagagagttgagaggaatcaatggagatgatggttcatgggaggagagacgagcagtatggcgggctcaggctcgggcttgggcttgggctcagcctcggcgtcgccggtggtgcagccgacgacgagcagccgccgccgcgccgtggtgccgccccgccgccgcagcagcagctgtgcggctggaacggcggcggtctcttctcctcgtcttcctccggtgagtatagatggacggacttacgtcgaagtcgtgcgtgcatgcatggatgcatggatcgatcttacgaaggttagtttgcgtgcagatcatcgggggaggtcggcgatgatggcgtgccacgacgtcatcgagatgccgttcctgcgggggatcgacgtgaaccgtgcgccggcggcagagacgaccacgacgacggcgagggggcccagctgcagcgaggaagacgaggagcccggcgcgtcctcccccaacagcacgctctccagcctcagcggcaagcgcggcgcaccatctgccgccaccgccgccgccgccgccgccagcgacgacgaggactccggcggcggatcccgcaagaagctccgcctctccaaggaccaagccgccgtcctcgaggacaccttcaaagagcacaacaccctcaatcccgtaagcaaaacaatcaatcaatcaaactaattaccaatccaccatgaaatcgatcaagaacaatccgattgacttgttcttgctggattgatcagaagcagaaggcggcgctggcgaggcagctgaatctgaagccgcggcaggtggaggtgtggttccagaacaggagggcgaggacgaagctgaagcagacggaggtggactgcgagctgctcaagcgctgctgcgagacgctcaccgacgagaaccgccgcctccaccgcgagctccaggagctccgcgccctcaagctcgccaccgccgccgccgcgccgcaccacctctacggcgcccgcgtcccgccgcccaccaccctcaccatgtgcccctcctgcgagcgcgtcgcctccgcagccaccaccacccgcaacaactccggcgccgcccccgcgcggccggtgcccacccgcccgtggccgccggcggcggcgcagaggtcgtcggcgtagagaccccactactgattaattagttaattagagatgagtagtggctttttcttaattagcagggtattaattaattacttaattagggttggacccctgtagttttcttgtttatactacgtgtataatttagctctggttttgaactttttaattagtttcataatctttttttttcctatctctcacttcaccctgtttgttgtttactcagcaaagaatatggtgtctttgtataaagtgatgcatgaaatggatcataaaagttttcaatattaattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0561800, RefSeq:Os10g0561800