BGIOSGA030944

From RiceWiki
Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030944| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030944, complete gene.| tag = OJ1509_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030944

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030944, complete gene.

LocusTag

OJ1509_C06.4

Ensembl Transcript ID

BGIOSGA030944-TA

Ensembl Protein ID

BGIOSGA030944-PA

Length

6846

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16688406..16695251

Sequence Coding Region

16688406..16688606,16688981..16689069,16689863..16689929,16690013..16690128,16690662..16690728
,16690842..16690890,16691314..16691399,16691510..16691763,16691843..16691898
,16692368..16692453,16692732..16692824,16693475..16693904,16694023..16694546
,16694647..16694875,16694956..16695251

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16688406..16695251 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16688406..16695251 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGGCGGCAGGAAGCGCGGGCGCACGCAGCGCCGCCACTTCAAGCAGGGGCGGGAGAACGTCTGGAAGCACAACCCGCAGCGCCCCCCGGCGGCTGGCGGCGAAGGAGCCGAAGGAGGCGCTGCCGAGGGGCGCGAGGGGAACCCCTCGTGGCAGCCCTTCGCCACCGAGAACCCAGCCTTCGAGGACTACTACAAGGCACAGCAAATTATTCCGGAGGGAGAGTGGGACGACTTCATGAACATGCTCCGGAAACCGCTGCCAGCCACTTTCAGGATTAATGCGAGCTGTCAATTTTATCAAGATATTTGCTCACAGTTAGAAAATGACTTCAGGAAGTCATTGGAAACTGAGGTTAGTGATGAGCATGAAGAAGATGCTATTCGGCCTTTGCCTTGGTACCCTGGCAATCTTGCATGGCATTTGAATTTTTCTCGAATGCAGCTGAGGAGAAACCAGGCACTTGAGGGTTTTCATGAATTCTTGAAGCGAGAGAATGAAGTTGGCAATATAACTAGGCAAGAGGCTGTCAGCATGGTTCCTCCTTTGTTTCTGAATGTGCAACCTGATCATCATATTCTTGACATGTGCGCTGCTCCAGGATCAAAGACCTTCCAGTTACTTGAGATGATCCATCAGTCTACAAAGCCTGGAATGCTTCCAAATGCCCTTGTGGTAGCTAATGATGTTGATGTGCAAAGATGCAATCTTCTTATTCATCAGACAAAGAGAATGTGCACAGCCAACTTGATTGTGACGAATCATGAAGCACAGAACTTTCCTGGCTGTAATCTTGCAAAGTTTAGTTCAGAAACATGCACGGATGAGTCCAAACTGCAGAGGTTGGAATTTGATCGTGTATTGTGTGATGTGCCTTGTAGTGGTGATGGAACTGTGCGTAAAGCTCCTGATATGTGGAGAAAGTGGAATGCTGGTATGGGGAATGGACTCCATCGTCTCCAAGTAGAAATTGCAATGCGCGGTATTGGTTTGCTTAAAGTGGGTGGAAGGATTGTTTACTCAACATGTTCAATGAATCCTGTTGAAAATGAAGCAGTTGTCGCGGAGATTCTACGGAGATGTGGGGATTCTGTTGAACTTCTTGATGTTTCTAATGAGCTACCTGAATTAGTCAGGCGTCCTGGACTTAGCACCTGGAAGGTACGGGATAGAGGGTCTTGGTTTGGCACTCACGAAGATGTCCCTCGCTACAGAAAGAACGTGATATCACCAAGCATGTTTCCTTCAGGGAAGGGCACCATGGATAGCCATGTGGCTATTGGCAGTGTTGAGATCAACACAGATGTAATTGATGCTGATATGAAAGATTCAACAAACATGGTAGAGGGAGAACAAGAAACGAAAACAGCATCTGATGATGTCAATAATGGTGGTGATCCCAATACTGAAGAGACGAGCAAACTTGAGTCTAATGAAGTTCCAAACGACTCTGATAAAAAGTCAAATTCTGCGTCTATCCGCACAGAACATTCAAATTTCCCTCTGCATCGCTGCATGAGAATTGTTCCGCATGATCAAAACAGTGGGGCATTTTTTATTGCAGTCCTTCAGAAAATCTCCCCTATTAATGAGAACCAAGAGGCAGAACTTATAAAAGGCGAGCACAATATTTCAAAGGATAAGGCTGAGAAACTTGAGAAAGGTCTCGGATCAGATAAGGTGCCACATAAAGAAAATACCGTGCAGCAGCAAGGAGTTGATGATGGTAATGTTATGGATGAACAGCAAAATGGAGATGTGGATAATGAAACATCAAATGGTAAAAGCTCAGAGGAAGCTAAAGTAATTGTTAATGAGGCAGAAAATGATCAAGCAGGACCAAGAGATAGGAGGAGGAAGCCACAGAACCAAGGAAGGTGGAGAGGGGTTGATCCAGTGATATTTTTCAAAGATGAAGCTACAATAAGAAGTATAGTATCTTTCTATGGTATCAAGGATACATTTCCGCTTGAGGGTCACCTTGTGACTAGGAATCCTGATGCTGCCCATGTTAAAAGAATATACTACGTGTCAAAATCAGTGCAAGAAGTTTTGGAGCTCAATGTAAAAGTTGGTGAGCGGCTTAAGATTACCTCACTTGGCCTAAAGATATTTGAAAGACAGTCATCAAAGGATGGCTCACCATGCACATTTAGGTTGTCTTCAGAGGGTTTACCACTGCTGCTTCCATACATCACCAAACAGATTCTCTACGCTTCTGCAATTGACTTCCAGCACCTTTTACAATACAGAACTATTAAATTTCCCGATTTTGTGGATGCAAAATTCGGTGAAGAAGCTTCAGCTTTGTTGCCTGGTTGCTGTGTTGTAGTACTTTGGGAAGGGCATCAGAACATAGATTCCATCGCCATGGATCCTTCTGCAATCGCCATTGTTTGCTGGAAAGGGAAGACCAATTTGTGCGTCATGGTTTCTCCCCTGGATGGGAAGGAGCTGCTTGAGAGGATTTGTTTACGTTATGGGCTCAAAATCCCCAAAGCGGATGATGTAAAACCCAGCATGAAGATTGATGGATCAGACGAGCAGCCTGATCTCAGCACTGAGGCAGTTGATCCAGAAGCTGTGCCCGAAAGCAAAGCATCTGACATGGAGATTGCAGATGCTAAAGAGGTGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGGGRKRGRTQRRHFKQGRENVWKHNPQRPPAAGGEGAEGGAAEGREGNPSWQPFATENPAFEDYYKAQQIIPEGEWDDFMNMLRKPLPATFRINASCQFYQDICSQLENDFRKSLETEVSDEHEEDAIRPLPWYPGNLAWHLNFSRMQLRRNQALEGFHEFLKRENEVGNITRQEAVSMVPPLFLNVQPDHHILDMCAAPGSKTFQLLEMIHQSTKPGMLPNALVVANDVDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCNLAKFSSETCTDESKLQRLEFDRVLCDVPCSGDGTVRKAPDMWRKWNAGMGNGLHRLQVEIAMRGIGLLKVGGRIVYSTCSMNPVENEAVVAEILRRCGDSVELLDVSNELPELVRRPGLSTWKVRDRGSWFGTHEDVPRYRKNVISPSMFPSGKGTMDSHVAIGSVEINTDVIDADMKDSTNMVEGEQETKTASDDVNNGGDPNTEETSKLESNEVPNDSDKKSNSASIRTEHSNFPLHRCMRIVPHDQNSGAFFIAVLQKISPINENQEAELIKGEHNISKDKAEKLEKGLGSDKVPHKENTVQQQGVDDGNVMDEQQNGDVDNETSNGKSSEEAKVIVNEAENDQAGPRDRRRKPQNQGRWRGVDPVIFFKDEATIRSIVSFYGIKDTFPLEGHLVTRNPDAAHVKRIYYVSKSVQEVLELNVKVGERLKITSLGLKIFERQSSKDGSPCTFRLSSEGLPLLLPYITKQILYASAIDFQHLLQYRTIKFPDFVDAKFGEEASALLPGCCVVVLWEGHQNIDSIAMDPSAIAIVCWKGKTNLCVMVSPLDGKELLERICLRYGLKIPKADDVKPSMKIDGSDEQPDLSTEAVDPEAVPESKASDMEIADAKEVE</aaseq>

Gene Sequence

<dnaseqindica>1..201#576..664#1458..1524#1608..1723#2257..2323#2437..2485#2909..2994#3105..3358#3438..3493#3963..4048#4327..4419#5070..5499#5618..6141#6242..6470#6551..6846#ATGGGAGGCGGCAGGAAGCGCGGGCGCACGCAGCGCCGCCACTTCAAGCAGGGGCGGGAGAACGTCTGGAAGCACAACCCGCAGCGCCCCCCGGCGGCTGGCGGCGAAGGAGCCGAAGGAGGCGCTGCCGAGGGGCGCGAGGGGAACCCCTCGTGGCAGCCCTTCGCCACCGAGAACCCAGCCTTCGAGGACTACTACAAGGTGCGGTTGCTTAATATTTTACTTTTTTTGGGTGTGATTTGGTTGTGTTAGTAAAAAAATTGAGCTGAGCTAGCGGCATCTCGGTTTTGATCGTATGGTCTCGCTCTAGGTATGTGTACTTCGTTTAGAATGTGATGATTTGTTGTCTTGTTGATTGCGGATATTATAGCTTTCAAGCAAGAAGCAACTGCTCTATTTTGATTGTGATGTTGAGTAGCGAGTACTGATCTCTAGACTTACCTTACGATAAGAGAAGCCTAACTGGACGCACTGCATTAGCTTATACTGTTGTTGCTTGTTGCTTATTAGCTTAGTTTTTCAGTTGGATGCATAACTTCTGAATTAGAATGTTTATACATGTTTATGGCTTATAGGCACAGCAAATTATTCCGGAGGGAGAGTGGGACGACTTCATGAACATGCTCCGGAAACCGCTGCCAGCCACTTTCAGGATTAATGCGAGGTAATGTTGTTTTCATCTGAAGCAACGTGACGCCATCCACATGTTTGGTCTAATGATTTATTGTTTGTTGGTCACATTGTATTGAATGGCAGTGCAGTTAGCTTGTTTATGACACTACCTTGATTATTGCAATATAGCAGCATCACATTTTAAAGAAAATCATTCCTTGAGTTCTGATGATTGTGTAATGTAGCTTTTCATGACCAAACAGCTTGCAATATTGCTCGAAATCACCAAGAAGGCAAAAATTCCTTGGTGGTGTTGTATATGTTCTGGGTGAAATATCTATAAGCTCTCAAAACTTTGTTCCAACAAAAATGAATCTGGGGGATTCTCCTAGCTTATAAAAAGATATAGATATAGATTTTATACTGTTTTCTATACAATCAAAACTTTTAATCTTATCTTGCTAACTCTCTATTGCTGTTATTTAAACTCTAATCATATATAGGTTCTAGATATCTGCCTATTGTTTGAATTGATAAAAACCATGCTCTGTTTGAATAATCTTTTACTTGACTCCATATAACTTTCACTGTCCTTTTGTAAAAGAAAAGGACATTATCTCTATCCTGATTCTCCTGTTTTTTCCCTGCCATGGTTCATTCTTCAGATATAACCATCTCCAGTTCTATGTGCAATTGATCATATAGTTAGAACAAAAGCATTTGCATGAAATGCACTGGTGATTTTACTGATACCTTATCATGTCTGGTATCATTGCACATAACTAATTCTTGTTTTATGATGATTATTCTGTTCTAGTATGCTAATGTTGTCCTTACCTTTCCAGCTGTCAATTTTATCAAGATATTTGCTCACAGTTAGAAAATGACTTCAGGAAGTCATTGGAAACTGAGGTAGCTTCTATATTTTGTGCATAAATTTTAGTTATGTCCTTCACAATTCTATTTTGTAATCCTTTTTTTTTTTGCATGGACAGGTTAGTGATGAGCATGAAGAAGATGCTATTCGGCCTTTGCCTTGGTACCCTGGCAATCTTGCATGGCATTTGAATTTTTCTCGAATGCAGCTGAGGAGAAACCAGGCACTTGAGGGGTATGCATAATGTTTATCTTGGGAGAATTGTGTCAACAATGCGCAGTATATAGGATGATTGTTTTTTAGGAGTGTGGTAAACTGATGTTTTTGTTACAATAAAACTCCCTTCACCTGGTTTTTGTCATCTGATGTATATACCATCATTACTAAATATCACCATAGCGTTAGCACGGGCACATTACTAGTTTGTGTAAATTGATGAATTTATTGAGAACATGGTTGCCCCTTAAATGATGAACAACTAACCAATTTATGGCTTTATAGATCAGTGATTGCCTTGAATTCTCTACTAAACCATCACCAAAAGTTCACCAAAACTTCTCAAATATTTGTGTCTGGCTTTTTGTTGCAGATTTAGTGTTATATCACTGTTAGCAGTTTTTCATAAGATTTTTTAGGGCTAGTTTCTTTTGAAAAAGAAACTGAAAAAAATTGCACTTAACAATTGCTGCCATTGAAACATTGGAGGCGCTCATTTAATATTCTATTGAGACATAATACTTTTTTGTAATATTTGTTTCCCTCTCCAGTTTTCATGAATTCTTGAAGCGAGAGAATGAAGTTGGCAATATAACTAGGCAAGAGGCTGTCAGCATGGTAAGTTCCTTATATATATTAAGATGAGCTATATGAGTATATTGTTTATTGATGATGGTCTATGTATATTGCGGATATTCTTCTTGTTAAAATGATATGTAATATTTTTACAGGTTCCTCCTTTGTTTCTGAATGTGCAACCTGATCATCATATTCTTGACAGTATGTATATCCATGTTCTTTTCCATCATTCCTCATATTGTGCTATTTATGCAGCTGGCTGTCTGTCTCTTGACCTGCATGTTTGACCTAACTTTGCTCTTCTGTAGTCCAGCTTGTAATGTTTAAAACTAATTGCTCAATAAAGCATCTGGCGCAATAGTTCCTAATAAAAGTTTATAAGTCTCAGGAACATGTTAATTTATTAGTACCAGTAAAAAGGAAAAAAATGAGAACACCAGAATACCCCGTAGTTATCATTTAGACCTAGCCTTTTCTGTTTGGCTTTAGCTTTATATCAGACTTAACTTTTGAGGCATTTGAGCTTAAAAGTAGGTTACACATGGACTATTTGAAAATTTTATTTTTAGAGGAAGACTTCTCCAATATTGGTCTTGTGAATTTTTGTGGTATTATCCTATGCAGTGTGCGCTGCTCCAGGATCAAAGACCTTCCAGTTACTTGAGATGATCCATCAGTCTACAAAGCCTGGAATGCTTCCAAATGCCCTTGTATGTTTCACATTCTATTACACATATCTATAGTTTCTGGTAACGATAGAAAAAAAAAACTTTGAATCAAAACCTTTTTTCTGATTTTGTGTTTCATACTTTGTACTCAGGTGGTAGCTAATGATGTTGATGTGCAAAGATGCAATCTTCTTATTCATCAGACAAAGAGAATGTGCACAGCCAACTTGATTGTGACGAATCATGAAGCACAGAACTTTCCTGGCTGTAATCTTGCAAAGTTTAGTTCAGAAACATGCACGGATGAGTCCAAACTGCAGAGGTTGGAATTTGATCGTGTATTGTGTGATGTGCCTTGTAGTGGTGATGGAACTGTGCGTAAAGCTCCTGATATGTGGAGAAAGTGGTAAGTAGTGAAATTTTTTAGCCGTGGTGCTACTGTCATCGTCTTCCCTATTTCCTTATCAATTTTATTTGCCACTCAGGAATGCTGGTATGGGGAATGGACTCCATCGTCTCCAAGTAGAAATTGCAATGCGCGGTAATGATTTGAAGAGGCTAAAACTATCATATGTTCCAATGAACTGTTAACTTTTTTCGCTATGTTGGACTTTTGTTTCTTGAAATGTAAATGTAACTAACCATTGTAAAGCAATTTTTATGTAGTTTTCTCCTCCTTAGACTTGTGATTTTATCAATTCACTATCTATTATTATATTCCGTATTTTACTATGAACCAGGTCCTTGTAGCTGTGGTGTGTCATTAAATGTTCCATGAACTGAGATTGATAAAATAGCTAACTGGTTAGTCTTATAAGTTCATTTACATACATGATAGCAAGATATGTGCATCTGGTATGGATTCCTTTTCAATTACCGATCATGTGTAATCAAGTATTAAATCAGCACAAATTTGATACTTTGTAATGTGTAACATGATACGTTAGTTGCTAATTGCCATCAATGCTATGCTACCTCAAGAGATTAAGATTCTTTGTTTCATTGTTCAGGTATTGGTTTGCTTAAAGTGGGTGGAAGGATTGTTTACTCAACATGTTCAATGAATCCTGTTGAAAATGAAGCAGTTGTCGCGGAGGTATTTTTTGTTGCTTGATTTAACTTTACTTCCTTTGCCCCTCTCTAATATTAATGTAGTAATGTTTGATTGATCAAATTATTTTTGTTGCCTTTTTCTTTGTCATACACTTATACTTGATGAGACCCTAAAATGTTTTCAGTGTGTCAAATCTACCATGGGAGTAACTTTTGTTGAGATTAGACCATCTAGGAATGTTCATTTTTCAAGTGTAGCACTTGTTTTCATGTCCTGTGTACCTTGTTGTGACATTGACCATATTTTTCATAACTAAATAGATTCTACGGAGATGTGGGGATTCTGTTGAACTTCTTGATGTTTCTAATGAGCTACCTGAATTAGTCAGGCGTCCTGGACTTAGCACCTGGAAGGTCAGTGTACATTTCTCTGAATCATGCATATTTCCTTGTATATTTTGTATCACTTTGCAATTTTGCATAATTAGCTGCGACTGTGATCTTCTGTGGCCTTAGAGCCAAAAAAGAAAAAAAAAAGTCACCCTAGGTTCACCCAATCTGCTGTAATGCGCTGAACTGCGATTACTACATGTTTTAATTATCAATATCATGGACACATGGTTCATCTTCCATTTATATGGTCTAGATTAGATCTGTCTGAGTTTTTCACTGGATAAAGTGGTGACTGAGTTTGCATTTACATGTAGCAATACACAACTATATCTTGAACATCTTTTTATTTACTGTTTTGATCAATGTTGCTACTTTGTTTGTTTTAGTAGTTTCTTAGATGTGATATGAAGAGTTGTGGATGGGTGTCCAATTTTGTAGATATTCTACTGTGCTTTTCAGTTTATGAAACTTGTGCAAGGACAATGGAGGTAGCAGCCATTGTTTTAGTTTTTTTGGAGTTATTTCTTAGTCAGAGTTGTTTGCATTCTGCTCTGTTGGTTTTGTTATTCTGTCACAGAAGTATTCTCCGTTGGGGGGCCCCTCTAAATTTGATATCCCACACTCTGGAGTATTTGATTCTTTTGCAGTTATTGCCTTCCTAACTGTTGCAGGTACGGGATAGAGGGTCTTGGTTTGGCACTCACGAAGATGTCCCTCGCTACAGAAAGAACGTGATATCACCAAGCATGTTTCCTTCAGGGAAGGGCACCATGGATAGCCATGTGGCTATTGGCAGTGTTGAGATCAACACAGATGTAATTGATGCTGATATGAAAGATTCAACAAACATGGTAGAGGGAGAACAAGAAACGAAAACAGCATCTGATGATGTCAATAATGGTGGTGATCCCAATACTGAAGAGACGAGCAAACTTGAGTCTAATGAAGTTCCAAACGACTCTGATAAAAAGTCAAATTCTGCGTCTATCCGCACAGAACATTCAAATTTCCCTCTGCATCGCTGCATGAGAATTGTTCCGCATGATCAAAACAGTGGGGCATTTTTTATTGCAGTCCTTCAGAAAATCTCCCCTATTAATGGTAATCTTTAGGAATTTATTCCATGTATTTCATGACTTGTATCAAATTGCATAAACTTATTAGCCACTGCTTATTAATGTTCAAGTGTGCATACCTTAATATCTTTGGTTCTTTGCAGAGAACCAAGAGGCAGAACTTATAAAAGGCGAGCACAATATTTCAAAGGATAAGGCTGAGAAACTTGAGAAAGGTCTCGGATCAGATAAGGTGCCACATAAAGAAAATACCGTGCAGCAGCAAGGAGTTGATGATGGTAATGTTATGGATGAACAGCAAAATGGAGATGTGGATAATGAAACATCAAATGGTAAAAGCTCAGAGGAAGCTAAAGTAATTGTTAATGAGGCAGAAAATGATCAAGCAGGACCAAGAGATAGGAGGAGGAAGCCACAGAACCAAGGAAGGTGGAGAGGGGTTGATCCAGTGATATTTTTCAAAGATGAAGCTACAATAAGAAGTATAGTATCTTTCTATGGTATCAAGGATACATTTCCGCTTGAGGGTCACCTTGTGACTAGGAATCCTGATGCTGCCCATGTTAAAAGAATATACTACGTGTCAAAATCAGTGCAAGAAGTTTTGGAGCTCAATGTAAAAGTTGGTGAGCGGCTTAAGATTACCTCACTTGGCCTAAAGATATTTGTAAGTGTCTCCTTAATTTATGTTTTCTTTATCAATTTTAGCTTTTATCAGTGGGGCAAATGGCACGACACTAAGCTGTGATTCTTGCAATATCTTTCAGGAAAGACAGTCATCAAAGGATGGCTCACCATGCACATTTAGGTTGTCTTCAGAGGGTTTACCACTGCTGCTTCCATACATCACCAAACAGATTCTCTACGCTTCTGCAATTGACTTCCAGCACCTTTTACAATACAGAACTATTAAATTTCCCGATTTTGTGGATGCAAAATTCGGTGAAGAAGCTTCAGCTTTGTTGCCTGGTTGCTGTGTTGTAGTACTTTGGGAAGGTAACATCACATCCCACTTATAAGCTTTATAGAGAAACACCACAACTTGATGACAGCTAAACATGTTTGAAATATTTCAGGGCATCAGAACATAGATTCCATCGCCATGGATCCTTCTGCAATCGCCATTGTTTGCTGGAAAGGGAAGACCAATTTGTGCGTCATGGTTTCTCCCCTGGATGGGAAGGAGCTGCTTGAGAGGATTTGTTTACGTTATGGGCTCAAAATCCCCAAAGCGGATGATGTAAAACCCAGCATGAAGATTGATGGATCAGACGAGCAGCCTGATCTCAGCACTGAGGCAGTTGATCCAGAAGCTGTGCCCGAAAGCAAAGCATCTGACATGGAGATTGCAGATGCTAAAGAGGTGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030944