BGIOSGA030946

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Revision as of 09:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030946| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030946, complete gene.| tag = OJ1509_...")
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Gene Name

BGIOSGA030946

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030946, complete gene.

LocusTag

OJ1509_C06.10

Ensembl Transcript ID

BGIOSGA030946-TA

Ensembl Protein ID

BGIOSGA030946-PA

Length

6278

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:16719764..16726041

Sequence Coding Region

16719764..16720232,16720672..16720751,16720864..16721328,16724416..16724502,16724633..16724764
,16724848..16725039,16725155..16725241,16725367..16726041

Genome Context

<gbrowseImage1> name=IndicaChromosome09:16719764..16726041 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:16719764..16726041 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCGAGCAGCAGCCCGCCGCCGTGCCGAGGTGGACGCCGAGCCCGCGGCGGCGTCAGGACGACGACGAGGCTGATCGCAAGGGGGCAGCCGGCATGGTCTCCGATCTCGGCGCCTCCATGCGCGGCACCGAAGGCTTTCCCTTCGGCAGCGGGCGATCGTTCCAGCCGCCGCCGTTCCTGCCGGCGGCGGAGGCGGAGCAGCCCTCGCCGGAGATTAGCGTGGAGAGGAACGACGAGAACGACCGTGTCGCCTTCGTCGTCGCTCGAGAGACGTCGTCCTTGCGCCGGCCGGAACAAGGCGCCGTCCTCGCGTGGGAGGACCTCTGGGTGTCCACCGCCGGCGGCAGCCGCCGCCGCGTTCCCATCCTCTGTGGCCTCAATGGCTACGCGCGCCCCGGCGAGGTCCTCGCCATTATGGGCCCCTCCGGCTGCGGCAAGTCCACTCTTCTTGACTCCTTAGCAGGAAGGTTAGGCTCCAGCGTGAGCCAGAAGGGAGACATCCTGATCAATGGCCGGAGACAGAAGCTGGCGTTCGGCACGTCGGCGTACGTGACGCAGGACGACGTGCTGATGAACACGCTGACGGTGCGGGAGGCGGTGCGGTACTCGGCGCAGCTGCAGCTGCCGAGCGGGATGAGCGCGGCGGCGAAGCGGGAGCGGGCGGAGGAGACGCTGCGGGAGATGGGGCTGGAGGGCGCGGCGGACACGCGGATCGGCGGGTGGGCGCACAAGGGGATCAGCGGCGGGCAGCGGCGGCGGGTGAGCATCTGCATGGAGATCCTCACGCGGCCGGCGCTGCTGTTCCTCGACGAGCCCACCAGCGGCCTCGACAGCGCCGCGTCGTACCACGTCGTCAGCCGCATCGCCCGCATGGCGCGCCGCGAGGGCATGACCGTCGTCGCCGCCGTGCACCAGCCCAGCACCGAGGTGTTCGGCCTCTTCCATGGCCTCTGCCTCCTCGCCTACGGCAAGACCGTCTTCTTCGGCCCCGCCGCCGACACCGCCCAGTTCTTCGCTCTGAGCGGATTCCCTTGTCCGTCTCTGATGAACCCTTCTGACCATTTTCTGAGGACCATCAACAAGGACTTCGACAAGGACATTGAGGTAGGTCTGGACGGGAAGACGATGACCACTACCCAAGCAATCGACACACTTGTCAACTCATACAAATCCTCCGTTCACTTGGCGAAAGTGATGCATCAGATCGAAGAAATACGCGCCAATAATGAAGGGCAATTGGTGAAGAAGGAAAGGCAGCCAACTTTCCTGACGCAGTCATGGGTGCTGACGAAGAGGTCCTTCGTCAACATGTACAGGGACTTGGGCTACTACTGGCTGCGTTTCGCCATTTACGTCGCGCTCTGCCTCTGCGTCGGCACCATCTACTACGATGTCGGCCATTCCTATGGATCCATCCAGGCCCGTGGCTCCATGCTCATGTTCGTCGCTGCCTTCCTCACCTTCATGGCCATCGGTGGCTTCCCCTCTTTCGTTGAGGACATGAAGATATTTGGGAGGGAGAGGCTCAACGGCCATTACGGTGTGGCGTCGTTCGTGATCGCGAACACGCTGTCGTCTACACCGTACCTAGCTCTCATCTCCGTGGTGCCAGGCGCGATCGCCTACTACCTGACCGGCCTCCAGAGCAGCGGCGAACACTTCGGCTACTTCGCGGCGGTGCTCTTCACGACCATGATGGTGGTGGAGGGGCTCATGATGATCGTGGCCAGCGCCGTGCCGGACTTCCTCATGGGCATCATCACCGGCGCCGGCGTCCAGGGCGTCATGATGCTCAACGGCGGCTTCTTCCGCCTCCCCAACGACCTTCCAAAGCCGGTGTGGAAGTATCCCATGTACTACATCGCGTTCCACAAGTACGCCAACCAGGGATTCTACAAGAACGAGTTCTTAGGCCTCACCTTCCCCAAATACAACGATCAAGCCGGCGCCGGCACCGTGATCACCGGTGAAGAGATCCTTACGAACTACTGGCAGGTACAGCTCGGGTACAGCAAGTGGGCCGACCTCGCCATCCTCATTGGAATGGTGGTGCTGTACAGGGTGCTCTTCTTTGTCATCGTAAAGCTCATCGAGAAGATGAAGCCCATGGTGCAGAGGCTCCGGTTCAGGAGCGACATGCCGTCAGTTCAGGTCACTGAGCAGGGTTTCGGCAGCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MASEQQPAAVPRWTPSPRRRQDDDEADRKGAAGMVSDLGASMRGTEGFPFGSGRSFQPPPFLPAAEAEQPSPEISVERNDENDRVAFVVARETSSLRRPEQGAVLAWEDLWVSTAGGSRRRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDSLAGRLGSSVSQKGDILINGRRQKLAFGTSAYVTQDDVLMNTLTVREAVRYSAQLQLPSGMSAAAKRERAEETLREMGLEGAADTRIGGWAHKGISGGQRRRVSICMEILTRPALLFLDEPTSGLDSAASYHVVSRIARMARREGMTVVAAVHQPSTEVFGLFHGLCLLAYGKTVFFGPAADTAQFFALSGFPCPSLMNPSDHFLRTINKDFDKDIEVGLDGKTMTTTQAIDTLVNSYKSSVHLAKVMHQIEEIRANNEGQLVKKERQPTFLTQSWVLTKRSFVNMYRDLGYYWLRFAIYVALCLCVGTIYYDVGHSYGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVASFVIANTLSSTPYLALISVVPGAIAYYLTGLQSSGEHFGYFAAVLFTTMMVVEGLMMIVASAVPDFLMGIITGAGVQGVMMLNGGFFRLPNDLPKPVWKYPMYYIAFHKYANQGFYKNEFLGLTFPKYNDQAGAGTVITGEEILTNYWQVQLGYSKWADLAILIGMVVLYRVLFFVIVKLIEKMKPMVQRLRFRSDMPSVQVTEQGFGSS</aaseq>

Gene Sequence

<dnaseqindica>1..469#909..988#1101..1565#4653..4739#4870..5001#5085..5276#5392..5478#5604..6278#ATGGCGTCCGAGCAGCAGCCCGCCGCCGTGCCGAGGTGGACGCCGAGCCCGCGGCGGCGTCAGGACGACGACGAGGCTGATCGCAAGGGGGCAGCCGGCATGGTCTCCGATCTCGGCGCCTCCATGCGCGGCACCGAAGGCTTTCCCTTCGGCAGCGGGCGATCGTTCCAGCCGCCGCCGTTCCTGCCGGCGGCGGAGGCGGAGCAGCCCTCGCCGGAGATTAGCGTGGAGAGGAACGACGAGAACGACCGTGTCGCCTTCGTCGTCGCTCGAGAGACGTCGTCCTTGCGCCGGCCGGAACAAGGCGCCGTCCTCGCGTGGGAGGACCTCTGGGTGTCCACCGCCGGCGGCAGCCGCCGCCGCGTTCCCATCCTCTGTGGCCTCAATGGCTACGCGCGCCCCGGCGAGGTCCTCGCCATTATGGGCCCCTCCGGCTGCGGCAAGTCCACTCTTCTTGACTCCTTAGCAGGTAACATTTGAGAAAGTGGATTTTGATCCTTTATTTGCATGTCACTTAAATAGTTATGAAAAAAATTAAAAATATATATTAACATGTGATATCTTGCTCCATGAACATGCAAGTCAAATTCAACTTCTACATCTCGCAACGAAAAAACAAATTTAACTGTGAATATACGTTAGTTGTAGTTTAATTTATTTTTTCTTTGCGAGATGTAGAAGTTGAATTTGAACTTCTATGTTTGTGGCGTGATATATCATATGTTAATACATCTTATCAATTTTTTCATGACTATTTAAGTGACATGTAAATAACGAGAGGATATCCCTCGAGGGATTAAAATAGTTTCCCTTACATTTGATGCATGCCACTCTTCTGATCACCTCGGCTTGCGTGTGTTCCGAGACACCGAATATCACCGATCGAATTGCATGAATTCTGGGTACAGGAAGGTTAGGCTCCAGCGTGAGCCAGAAGGGAGACATCCTGATCAATGGCCGGAGACAGAAGCTGGCGTTCGGCACGTCGGTGAGTCGATCGGCGACGAATGATCTCGTTTTTTCTTTGATAAAGATTCGAGCAATGATGCAAGCATGGTGAGATCTCGTGTCGTGGAACGCATGAATGGATCGCGCCACAGGCGTACGTGACGCAGGACGACGTGCTGATGAACACGCTGACGGTGCGGGAGGCGGTGCGGTACTCGGCGCAGCTGCAGCTGCCGAGCGGGATGAGCGCGGCGGCGAAGCGGGAGCGGGCGGAGGAGACGCTGCGGGAGATGGGGCTGGAGGGCGCGGCGGACACGCGGATCGGCGGGTGGGCGCACAAGGGGATCAGCGGCGGGCAGCGGCGGCGGGTGAGCATCTGCATGGAGATCCTCACGCGGCCGGCGCTGCTGTTCCTCGACGAGCCCACCAGCGGCCTCGACAGCGCCGCGTCGTACCACGTCGTCAGCCGCATCGCCCGCATGGCGCGCCGCGAGGGCATGACCGTCGTCGCCGCCGTGCACCAGCCCAGCACCGAGGTGTTCGGCCTCTTCCATGGCCTCTGCCTCCTCGCCTACGGCAAGACCGTCTTCTTCGGCCCCGCCGCCGACACCGCCCAGGTACAAACTATTTTGTCCCAAATACAAATTATGCATCCGTATTTGCAAAGTTGTACGGCAAAATGAGAATTGTTACCAAACATACCGTATCAGAATTCAGAATTCGAATATATAGGGAAAAGTTATTTTATGAGGGGGTATATCCTCTCGTTTTGTGCGTGTCACCTAAATAATTATAAAAAAAGAAAAAAATCGGTAACATAGATTAATATAAAATATATCACTCTATAAATAGTAAAGTTTAAATTCAACTTCTATAAGTTGTAACAAAAATAACAAATATAGTTGCGAATGTGCAATAACTATTTTCAGTTTAATTTGTTATTTTTGTTGCAACTTGTAAAAGTTAAATTTAGTCTTGCATATTCGTAGAGTGATATATTTCATATTAATCTATACTATCATTTTTTTATTTTTTTAATAATTATTTAGATGACATGTAAATAACGAGGGGATGTCTCTCAAGAGATGAATATCCACATCCGATATATAGCTGAAATGAGATGAGACCGGTTAAGAAATCCGAAAGCCCTAGCCCTATACCGTTTGCAACTGTAGATGACGCTGACTTAGCTTACTCATGAACAGAAGCAACAGAACACATTCAATGCACTGAAACACACTCGCACAGTGACTCCAATCAGTCGGTGACGTGCGAATTTGCACCTTCTTGTGCTTTCTGTAGCTTACCCTTCTGACGGATTCATTGATCCCAACAGGAAGACGCAGCTGCAGTAGCAGTCTTCCGGCTGCAAGCTGCCGCGTGCCAGCATCATATCTAGTATACAGTGGTGCAAATGCATCAGTTTTGGCAAAATTTCAGTTCTGAAAGCTGCAAATCAGGTTCTATACTACTATGCAAAGATCCTACAATACAGTTAGTAGGTAAGACACACTGCACAAATCCTGAATTCCTGATACAACAAAGGTATCAGGTATTCAAGTGTGGTTTGAAGTCGAAATTAGGAAGCACTAGGTCACCACGAGATTTCTAAAGCTGCAACCGCCGGGAACCGGTTTGTGAATTCAGAAATTTGGATTTAAATTAACTTTTGTCCAGTTATCGGCACCGGTTATTGGTTTTTCAAATTAAACCTAAATACTTGACCTGGCCTAGAGTAGGGAAGTAGTACAGTCATTCCAAAATATAGAAACTTCTAACTGATACATACACATAAATTTTAGTATTTTGGGACGAAGTTGGTAATATACATAGGCAGAAGTTACTATATGTAGCAAAAGAAAACCATGAAGTTAAGTAGAAAACAAACGTCTTTTCTGATTTACAATGGGATTTGTGGCGAATGGCTTGATCGGCGCTTAAGACAATAGAAAAATGTTGTGCGCACGATTTGTACTTACAATCATGGTACGATCTAACGGGATGACATGGATGCATGGCACTGAGTCGACTGCTGCATACCAGCATCAGTGTCAATAAACACATAAGCTGTTTCATCGTACAAATATCGTAAACGGCAAATCATACGTGTAGCATCACTCTAGGCTCAGATCTGCAAACTGAACTTACTGGTTGCTAATTAAGCAAGGATCATTATATCTATGATATGGAGTAGGGATGAAAACGACTCGGAAACAAACAGAAATCATCTCTACCACTTCATTTTATATTTTTTTTGGCATCGGAATAAGAATCAGAAACTCTAGATACGAAAACCGAATCTATTATTATTGAATATGAAAACAGAGCGAACACGAATCGAAGCTAATATGGTAACAGATATTTATCGGATTATAAAACCTCCTCAAATTGAACTTCTCAAATCGACAAAGTGATGTAGCTCTTTTTTTTTCCTAGAACAACAAATCGACATTATCTATTTTTTATCAATTAATAATAATACAACTAGTGGCACACTTCACTTTTCATGAAAACAAGAACTATATTCATCTATACTGTAACTGTAAGTAGTATGGCTCAAAATTTCTGAAAAATTCAGGAATTTTCATACTTTTTCGCCAAAATTATTTGAAAAATTAACAAAAATTGATTGAATATTCCAAAATCACAAAAAAAATGGGAAAAAACAAAAATTCTGGCTGACATATTTACTTGCCGGTGGGGGTGGCGAAATTACTGAAATTTTAAACTGAAATTGACAACCTTTGTTTGGCATGGCCTAGTAAAACAAAAATAGTAATTAGGAAAAAAGAAAAACAGATCTAAAGTACTGAACTAGAAAACAATATCTCCATTCAACTAATTAACCATCTCAGTGTACTCAGTATAAATCTAAACATTTAGAGTAGAAAAGGTTAGAGCAAATTAGTCGTATGTGAGAAGTACTTCATTTCCGATTCTGAGGAAAAAAATCCGAATTTGTTTATGAAAAGTTCTCGATCGATCCTGGTTTCTGACGGATAGTAGCCTTATCGTATCCATTTTCATTTTCAAGAAAAAAAAATCCGAATTCGTTTCCATTTCTGAAACTTACCGAAAAAATTCCGACACTTTCTGTTTTCGAAAATACATCCGAAAATCGGAAACTTTCTGAACCGTTTTCATCCCTAATTTGGAGTAACCTAGACCGTGAGATGTCACACTAGTTTCGTGATGGAAAGCATATTTCTCCTCCCTAGCAAATCTGTGATATGTCAAAATCAAAATAGGGTTGAACAAAACAGCATTTGTGGAACAAAATCAAAACAGTGTTGAACAAGTGTAGCAAATTTTTCTATGCCGCTTATTTTTGTTGAACAAAACAGCATCCCCGCCACTTTAAACAAAAGAAAAAGAATACATATGCAATGTTTTTTTTTCTGAATCTGAACCACTTTAAACAAAAAATTCAACTAGATTTAAAGAAATTTGAATGGATCAGAAATTTTTATCCAATTCGAAAAAAAAAATCTCGGGAGGGTCCAAGATATATATTGTTTTTCTTAAAAATGAAACAGAGATATATATTGTGAGATTTTGATCTGAATGTGAAGCACTTAACAAACTTGAATTGAGTATTGACTGTACATGCTATTTTGTATTGACTAATATCATGAGAATTTATTCCGGTTGCTAGCTAAGCACTTCCTAATTTTTTTTATTGACTATATTTCACTGTTTATTAGTTCTTCGCTCTGAGCGGATTCCCTTGTCCGTCTCTGATGAACCCTTCTGACCATTTTCTGAGGACCATCAACAAGGACTTCGACAAGGTGAGAAGCAAATCATGGGAGAGCAAGCTAGCCAATGCACTGAATCAGTGAATAAATATCCTTTTTCTCAAAAAGAAAGTGACTAAATGTCCTAAATAAATTACTCCCTTCTATACGATGCATTCATCAGGACATTGAGGTAGGTCTGGACGGGAAGACGATGACCACTACCCAAGCAATCGACACACTTGTCAACTCATACAAATCCTCCGTTCACTTGGCGAAAGTGATGCATCAGATCGAAGAAATACGCGCCAATAATGTATCTCGCAAAGCATTTTCTGCTACATATATATATAATATATGCATGCTTTACACATCCTGTAATTTTCTTTATCTCTGCAGGAAGGGCAATTGGTGAAGAAGGAAAGGCAGCCAACTTTCCTGACGCAGTCATGGGTGCTGACGAAGAGGTCCTTCGTCAACATGTACAGGGACTTGGGCTACTACTGGCTGCGTTTCGCCATTTACGTCGCGCTCTGCCTCTGCGTCGGCACCATCTACTACGATGTCGGCCATTCCTATGGATCCATCCAGGTTTGCTGGCCATGCATGGCTCTGGCACAGTCTTCCATATTAATTTGTTCGCGGTTTAATATCTATTACTCATTGGCAAAATTGTGTGTGCATGACCGTCTGAAAATCTCTGCAGGCCCGTGGCTCCATGCTCATGTTCGTCGCTGCCTTCCTCACCTTCATGGCCATCGGTGGCTTCCCCTCTTTCGTTGAGGACATGAAGGTTTGTTCACTGATTTTCTTGAATGTCAAATTAAGGACACTTTTACACCAACCAAGATATATTTTGAACAGCCAAGATATACACCAACCAAATGTTCACTCCATAAATTTTGATATGAGATGCAGATATTTGGGAGGGAGAGGCTCAACGGCCATTACGGTGTGGCGTCGTTCGTGATCGCGAACACGCTGTCGTCTACACCGTACCTAGCTCTCATCTCCGTGGTGCCAGGCGCGATCGCCTACTACCTGACCGGCCTCCAGAGCAGCGGCGAACACTTCGGCTACTTCGCGGCGGTGCTCTTCACGACCATGATGGTGGTGGAGGGGCTCATGATGATCGTGGCCAGCGCCGTGCCGGACTTCCTCATGGGCATCATCACCGGCGCCGGCGTCCAGGGCGTCATGATGCTCAACGGCGGCTTCTTCCGCCTCCCCAACGACCTTCCAAAGCCGGTGTGGAAGTATCCCATGTACTACATCGCGTTCCACAAGTACGCCAACCAGGGATTCTACAAGAACGAGTTCTTAGGCCTCACCTTCCCCAAATACAACGATCAAGCCGGCGCCGGCACCGTGATCACCGGTGAAGAGATCCTTACGAACTACTGGCAGGTACAGCTCGGGTACAGCAAGTGGGCCGACCTCGCCATCCTCATTGGAATGGTGGTGCTGTACAGGGTGCTCTTCTTTGTCATCGTAAAGCTCATCGAGAAGATGAAGCCCATGGTGCAGAGGCTCCGGTTCAGGAGCGACATGCCGTCAGTTCAGGTCACTGAGCAGGGTTTCGGCAGCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030946