Os10g0562000

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0562000| Description = Conserved hypothetical protein| Version = NM_001071923.1 GI:115483441 GeneID:4349390| Length = 1804 bp| Definition ...")
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Gene Name

Os10g0562000

Description

Conserved hypothetical protein

Version

NM_001071923.1 GI:115483441 GeneID:4349390

Length

1804 bp

Definition

Oryza sativa Japonica Group Os10g0562000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22622164..22623967

Sequence Coding Region

22622417..22623892

Expression

GEO Profiles:Os10g0562000

Genome Context

<gbrowseImage1> name=NC_008403:22622164..22623967 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22622164..22623967 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcgcaggcgtcgctgctgcagagcttcccgttcagggcggcggtgttcgcggcgtgcgtactgctgctccccctcgtgccgtcgccgcaggcgccggcggcggggggagatggtggcggcggcggcggccgtggggaggcgtttcttgccaaggtgtgggagctgctccacctgctcgtcgtcgggatcgccgtgtcgtacgggctgttcagccgccggaacaacgccgggaggcggggcgacgagaaggatgccgcggcgcaggcgaaggcggactccgccgggtacgtgtcgcagatgatccacgactcgctggtgttcgacgacggtggcggcgacgtggcgctcgacagcccgggtggcaacagggtgcggtcgtggagcgcgatgcaccaccccgacgagcctgtggtggtggtggcgaccggcggcgcaggaggcggccggagccacgccgtggaggcggcgcagcaggcgccgccgctgtcgctgcccgtaagaacactgaagccgcagggcgagtcgtcctccagcgcgggctacggcgacggcggcgagccgtgggcggcgcggccgcgcaggatctcacaggacacgcccggcggaggcggcggcggccatgaaaccgtgctcccttcgccgatcccgtggcggtcacggtcggggaggttcgacgcgtcggcgccgagccccccttcgccgtcgccgaagaggctctccccggcgtcgtccctgtccaaggagacactagccaaggccagtgaggactactcctccaggcggaggagcccgtacaagtcatccccaccggcgccgcctccgccgccacctccgttcctcgtccacggctaccatccgccggcggccgaacgccgcacggcggcgaagagcttcaaggaggagctgcaggagcaaacctcccacagcttcactacctccgaattcagccgtagcagcagcaactcctcgtcggcgaagccaagaatctccatagatagctcctcctcctcctcgtcgtactacccagttgccaaatcggtgagaacaatcagaggaggaagagaatcactccagagccagagccaagaacaacccgacgtcgccgtcgccggcgacgcgccggctcttcttcacggatcggattcagacgatccgtacggtggctacagggcgtaccaatccattcccaggttccagtacgagagaggcagcagcgaccccatcctgggcaacgtgacggtgtcctcggagagcagcgacgacgacgacagcgacgtcgacggcgacggcgagctctcgacgagggggaactcgccgaggagggagtcgtcgccggaggtggacgagaacgaggtggacaagaaggcggaggagttcatcgccaggttcagggagcagatcaggctgcagagaatcgagtcgataaagaaatccgcggggccgcgtggtgtcaagcacggcaagtag</cdnaseq>

Protein Sequence

<aaseq>MAVAQASLLQSFPFRAAVFAACVLLLPLVPSPQAPAAGGDGGGG GGRGEAFLAKVWELLHLLVVGIAVSYGLFSRRNNAGRRGDEKDAAAQAKADSAGYVSQ MIHDSLVFDDGGGDVALDSPGGNRVRSWSAMHHPDEPVVVVATGGAGGGRSHAVEAAQ QAPPLSLPVRTLKPQGESSSSAGYGDGGEPWAARPRRISQDTPGGGGGGHETVLPSPI PWRSRSGRFDASAPSPPSPSPKRLSPASSLSKETLAKASEDYSSRRRSPYKSSPPAPP PPPPPFLVHGYHPPAAERRTAAKSFKEELQEQTSHSFTTSEFSRSSSNSSSAKPRISI DSSSSSSSYYPVAKSVRTIRGGRESLQSQSQEQPDVAVAGDAPALLHGSDSDDPYGGY RAYQSIPRFQYERGSSDPILGNVTVSSESSDDDDSDVDGDGELSTRGNSPRRESSPEV DENEVDKKAEEFIARFREQIRLQRIESIKKSAGPRGVKHGK</aaseq>

Gene Sequence

<dnaseqindica>76..1551#agcaaaagcagcttaaaaacagcgtcgtcacgctgcctcccgcttccccctcttcgtcttcttcttcttcctccaatggcggtggcgcaggcgtcgctgctgcagagcttcccgttcagggcggcggtgttcgcggcgtgcgtactgctgctccccctcgtgccgtcgccgcaggcgccggcggcggggggagatggtggcggcggcggcggccgtggggaggcgtttcttgccaaggtgtgggagctgctccacctgctcgtcgtcgggatcgccgtgtcgtacgggctgttcagccgccggaacaacgccgggaggcggggcgacgagaaggatgccgcggcgcaggcgaaggcggactccgccgggtacgtgtcgcagatgatccacgactcgctggtgttcgacgacggtggcggcgacgtggcgctcgacagcccgggtggcaacagggtgcggtcgtggagcgcgatgcaccaccccgacgagcctgtggtggtggtggcgaccggcggcgcaggaggcggccggagccacgccgtggaggcggcgcagcaggcgccgccgctgtcgctgcccgtaagaacactgaagccgcagggcgagtcgtcctccagcgcgggctacggcgacggcggcgagccgtgggcggcgcggccgcgcaggatctcacaggacacgcccggcggaggcggcggcggccatgaaaccgtgctcccttcgccgatcccgtggcggtcacggtcggggaggttcgacgcgtcggcgccgagccccccttcgccgtcgccgaagaggctctccccggcgtcgtccctgtccaaggagacactagccaaggccagtgaggactactcctccaggcggaggagcccgtacaagtcatccccaccggcgccgcctccgccgccacctccgttcctcgtccacggctaccatccgccggcggccgaacgccgcacggcggcgaagagcttcaaggaggagctgcaggagcaaacctcccacagcttcactacctccgaattcagccgtagcagcagcaactcctcgtcggcgaagccaagaatctccatagatagctcctcctcctcctcgtcgtactacccagttgccaaatcggtgagaacaatcagaggaggaagagaatcactccagagccagagccaagaacaacccgacgtcgccgtcgccggcgacgcgccggctcttcttcacggatcggattcagacgatccgtacggtggctacagggcgtaccaatccattcccaggttccagtacgagagaggcagcagcgaccccatcctgggcaacgtgacggtgtcctcggagagcagcgacgacgacgacagcgacgtcgacggcgacggcgagctctcgacgagggggaactcgccgaggagggagtcgtcgccggaggtggacgagaacgaggtggacaagaaggcggaggagttcatcgccaggttcagggagcagatcaggctgcagagaatcgagtcgataaagaaatccgcggggccgcgtggtgtcaagcacggcaagtagctcgcccgccgcccgccgccggcgatcaccggcgccacttttttacttttttttttgttctcgttttgagcagagatagatagtacggtactatttgtatttgtgatagctaattagtagttatcaagaaccacctgtaaacaaattacattcatgtagatgatgaatgagagtgagtgcatgttcatgctcaatttctgggcaaggagatcgactgttgcatctggcaatcaaactggatatctgttccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0562000, RefSeq:Os10g0562000