Os10g0562100

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0562100| Description = Homeodomain-like containing protein| Version = NM_001071924.1 GI:115483443 GeneID:4349391| Length = 1838 bp| Defini...")
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Gene Name

Os10g0562100

Description

Homeodomain-like containing protein

Version

NM_001071924.1 GI:115483443 GeneID:4349391

Length

1838 bp

Definition

Oryza sativa Japonica Group Os10g0562100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22630124..22631961

Sequence Coding Region

22630342..22630503,22630585..22630632,22630767..22630841,22630927..22631147,22631542..22631833

Expression

GEO Profiles:Os10g0562100

Genome Context

<gbrowseImage1> name=NC_008403:22630124..22631961 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22630124..22631961 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcatgaggaggcagcggagaggaagccttcgccgccggtgatattccggctgttcggcgtcgaggtccgcggcggcggcggcggagttgacgaggaggagtacgaggaggaggaggtggagggtggattgttcatcaagaagagctccagtatgcccaacctcacctccatcgacccgctgccggtgccggccgacggcggcaaacggcgcgcctccgacgactccgagctcgcctccggccagcagaagcgccgccgccgcaaggtgcaggagaggaagaaaggggtaccatggactgaggaggagcacaagaaattcctggaagggctgaggcagctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcgactcaggtggccagccacgcccagaagtacttcctccggcagaccaaccctggcaaaaagaagcgccgggccagcctctttgatgttgttgctgagtgcagtgatgatcagcttccaagtcctcagagtgttggaactaagcctcctacccaggatataattcatacagatcgcggcgatgtcccgatactaagctatccagttgctagaggctttagaggcgatagcgtgcaggttgatgaactaactgaatatgtgaagagattaaaggccgccgaggacatgtcgctctccatgatctctggactggaaatggcatcatcatccatcagcagtctagagctcagtatcgcgcctcctcattgcgcgatcgaggcggccatcaaggtgctgtga</cdnaseq>

Protein Sequence

<aaseq>MEQHEEAAERKPSPPVIFRLFGVEVRGGGGGVDEEEYEEEEVEG GLFIKKSSSMPNLTSIDPLPVPADGGKRRASDDSELASGQQKRRRRKVQERKKGVPWT EEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPGKKKRRASL FDVVAECSDDQLPSPQSVGTKPPTQDIIHTDRGDVPILSYPVARGFRGDSVQVDELTE YVKRLKAAEDMSLSMISGLEMASSSISSLELSIAPPHCAIEAAIKVL</aaseq>

Gene Sequence

<dnaseqindica>1459..1620#1330..1377#1121..1195#815..1035#129..420#agtctcctccaaaccgtcgagagcccaacaataataatccccccttttcatcgcggcgacgatacccgccattttcatctcattctcaccaccaaaagcgaccacgcagcgaccggccaccgatcgagatggagcagcatgaggaggcagcggagaggaagccttcgccgccggtgatattccggctgttcggcgtcgaggtccgcggcggcggcggcggagttgacgaggaggagtacgaggaggaggaggtggagggtggattgttcatcaagaagagctccagtatgcccaacctcacctccatcgacccgctgccggtgccggccgacggcggcaaacggcgcgcctccgacgactccgagctcgcctccggccagcagaagcgccgccgccgcaaggtgcaggagaggaagaaaggtgagcaaccaccctttttgtctgttcttgtatctactgttcattacttgttccatcacctgattcctttttttttactctgaaacttccaactcactgttaattcttgacgcaatttgatgatccgtgaaagcaaaaaaaaaacaaaaaaaatatctttgattgagcaaccaacaaaattggttgaaaatcccctcttccaaaagagagagaaaaatgattaaccttttgtgtgtcagtcaattggtcaacaacacatcgataacaatccacaagcaggttctcagacctgaaaaactttttactagttaggagtaattaattattccctgtttgttgcttcctgtgaagatcatgtgacacttaattgcctttgattgattaatctgtgaaggggtaccatggactgaggaggagcacaagaaattcctggaagggctgaggcagctggggaaaggggactggagaggcatctccaagaactttgtgaccagcaggacggcgactcaggtggccagccacgcccagaagtacttcctccggcagaccaaccctggcaaaaagaagcgccgggccagcctctttgatgttgttgctgagtgcagtgatgatcaggtcagtgacagtgcacttctttgatcagatccacgcatgttgggatcttgcagctaatgctcttgtctgaaaccttctgttgcagcttccaagtcctcagagtgttggaactaagcctcctacccaggatataattcatacagatcgcggcgatgtcccggtaattttctactttgcttccattttttcttctttgtagccacaagctgagttgtaattacccttagatgattactggttgtaacttgagacaaacaatcctatctgaagactgaatctttaatattgctgcagatactaagctatccagttgctagaggctttagaggcgatagcgtgcaggtaaaatcagcatctgagaacatcttcatggaacccagcaacagtctgaccaaaactaacacaaactgatccttctgtcaggttgatgaactaactgaatatgtgaagagattaaaggccgccgaggacatgtcgctctccatgatctctggactggaaatggcatcatcatccatcagcagtctagagctcagtatcgcgcctcctcattgcgcgatcgaggcggccatcaaggtgctgtgatccagacgcaattctccaccgaaggaatctggatcggcttcagctactgttcttcgtcgccgctgttgttgtttgttgttgttgttttttttttttttttgcgggggttgtttgttgttgttgttgttgtagttgtcatgctaactttgtatttgggtcatgtggcgtttctttcagcagtcttatataatacagtgagaatgtcagtaccttccgag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0562100, RefSeq:Os10g0562100