BGIOSGA030972

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Revision as of 09:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030972| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030972, complete gene.| tag = P0463G1...")
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Gene Name

BGIOSGA030972

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030972, complete gene.

LocusTag

P0463G11.13

Ensembl Transcript ID

BGIOSGA030972-TA

Ensembl Protein ID

BGIOSGA030972-PA

Length

3031

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17049213..17052243

Sequence Coding Region

17049213..17049564,17050655..17050853,17051382..17052243

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17049213..17052243 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17049213..17052243 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCGCCGCCGGAGGTAGGGCCCACCGCGGCGGCGGCGGTCGCCGGCGGGAAGAAGGAGGTGCGCGCATTGGATGGAGCATCGGCGACCAGTGAAGAAGAGGAGGTGGAGGTGGAGGTGGAGGAAGAGGAAGAAGCGGAGGAAGAGAGAGAGGATGAAGAGGAGGGGGAGGAGGATGGGGGCGATGAAGAAGAGGAGGAGGAGGAGGGGGTGAAGTGGCTGAAGCATTACTCCTCGATGCAAAGCATCTTGGTCGTCGGCGACGGGGATTTCTCCTTCTCGCGGGCGCTCGCCGTCGCATTCTGCTCCGGCGAGAACCTCGTCTCCACGTCTCTTGATTCCTATGAGGCTTTGAGGGGGAAGTATGCCAATGCAGAGTCAAATATAATGGTACTGAAATTGATGGGGGCCACAACTTTGCATGGTGTTGATGCAAAAACAATGAAGCATCACACTGACCTAAAGATGAGACGGTTTGATCGAATTGTATTTAATTTGCCTCATGCTGGATTCAAAGCAAAAGAGGGTGATATGCGTATGATCAACTTGCACAAGGATCTGGTCAGAGGATTCTTCCGCAATGCAAGATGCCTGCTTCGGCCTTCCGGTGAAATCCATGTTAGTCACAAGAGAGGAAAGGTGTATGAAAACTGGGAGATCGAGAAACTAGCCTCTGAATCTTCACTTATTATGGTTGAGAAAGTTGATTTCCATATAGAAGACTATCCTGGTTATAACCACAAGAGAGGAGATGGTCCAAGGTGCGACGAACCTTTCCCTCTAGGTCCTTGTTGCACTTTCAAATTCTCCATCAGAAACCATAAGAAGCAGAAGAAATGTCATTCAAAGAAGATTGGTTCAATCCCATCCCTTGGAGGCAGCCATGTCCATCCTGAAATATTGGCAAGTGACTGGAGTCCATCTCAGCCGTTTCGACCAGTCAATGCAGTTAACATGCCAGTAACTTTCGACCCATACTCACTCAGAATTGCTCAAAGCCATCAACCGGGTTTTCCTGTCAATTTTGTTGGCTTATGGACAGCGGCTGCCTGTTCTCTTCAGCATTGCAATATCCACCCAATGCTCAACATTGTAAGGCCATCGCTTCATCTTTTGCCCATTGCGTCCATCATTGCTCCACAAATGGGCAGAATCACAAGTACCAGTCTCTTTGCACCTCAGGAGCAGCCGAAACCTGTTCTTAGGCCATTGCAAAGCGTTAGCAGCTACGACCTTGCCAGGGAACACCAAATGAATCTGCGGAGGGAGTTTGAGATGAGAGGACAAACAATGCCTGCAGGAACCAGCTTGGATTACTTCGAGTTCCTGGAATATCTCTTCAGGGATCCTGCTGAGAAGGAGAAGTGGCTGCAAACTATGATTACGTTGCACGCTACACGGTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAVAPPEVGPTAAAAVAGGKKEVRALDGASATSEEEEVEVEVEEEEEAEEEREDEEEGEEDGGDEEEEEEEGVKWLKHYSSMQSILVVGDGDFSFSRALAVAFCSGENLVSTSLDSYEALRGKYANAESNIMVLKLMGATTLHGVDAKTMKHHTDLKMRRFDRIVFNLPHAGFKAKEGDMRMINLHKDLVRGFFRNARCLLRPSGEIHVSHKRGKVYENWEIEKLASESSLIMVEKVDFHIEDYPGYNHKRGDGPRCDEPFPLGPCCTFKFSIRNHKKQKKCHSKKIGSIPSLGGSHVHPEILASDWSPSQPFRPVNAVNMPVTFDPYSLRIAQSHQPGFPVNFVGLWTAAACSLQHCNIHPMLNIVRPSLHLLPIASIIAPQMGRITSTSLFAPQEQPKPVLRPLQSVSSYDLAREHQMNLRREFEMRGQTMPAGTSLDYFEFLEYLFRDPAEKEKWLQTMITLHATRW</aaseq>

Gene Sequence

<dnaseqindica>1..352#1443..1641#2170..3031#ATGGCGGTGGCGCCGCCGGAGGTAGGGCCCACCGCGGCGGCGGCGGTCGCCGGCGGGAAGAAGGAGGTGCGCGCATTGGATGGAGCATCGGCGACCAGTGAAGAAGAGGAGGTGGAGGTGGAGGTGGAGGAAGAGGAAGAAGCGGAGGAAGAGAGAGAGGATGAAGAGGAGGGGGAGGAGGATGGGGGCGATGAAGAAGAGGAGGAGGAGGAGGGGGTGAAGTGGCTGAAGCATTACTCCTCGATGCAAAGCATCTTGGTCGTCGGCGACGGGGATTTCTCCTTCTCGCGGGCGCTCGCCGTCGCATTCTGCTCCGGCGAGAACCTCGTCTCCACGTCTCTTGATTCCTATGGTATCTTCGATTGCTTCTTCTCTCAACTCTAGCCTCTCACTTCCCCTTACTCAATTGATTCGGATTTTGTTGCGGATGCCGCCATTTTTCCGCGCTTAGTAGAATAGTACACTACTATGAGTGCGATATGCCTTTCTTGCCTTGTATGCCTTGAGATTTTGGCCTGATAAAAAAAAAAAGAAGGCGAACTTTACTCCATCAAGAACTTAGTTTACCTTAAATTGGTGCGTGTGCAAACGTAGGAATAACAATTTTAGCAGGCTAGATAATACTAGGGTATACCTGTATGAAATTTATGTGTCGACATCCACAAACATGGGGTTGTCCTAAACCTTTTGCCCCAAAACCTAGGTTCCTTGAGAAGAACCCGGGTTTTCCGTTAAACTTGGGGTTCTATGAAATGTATTCATTCTGTTAATTATTTGTGGGATACCTTCATGTGTTCTTGGTTTTGGAAATAAGCTTTGCTAGTTGGTACATTTTACTGAGGATAATTATAAAGAAAAATGTTCTCTACTGTTAGAGTTGCATGTTATTGAAGGAACACTCATATTGAGCACACTATGTCTATCTTCAAGGTATTCTGCTCTCTGTTGTTGTTGGAACACAAACACTGTAAAATTGTGACTTACAGCCGTATGGTTCAAAAGTTCTAGGTCGGATTATCATTTCATATTGGTAATGGCGTCCATTTATTTTATTTTTTTTGACGCAAGCGTCCATTTATCTGTTTCTCTGATCAGTTTTTAGGCGTAACCTCTATGTTACCTTCATATATCATTTTTGCGCCTGCCAGCACGATATTATTATGTTGTGTTTAATCATCATCTTTGTTTCAAGTTTGCTTTAAGGTACAGACATCAAAACAATCGCAAAGGGGCTAAATGGAAACATATGTGAACCAGTTAAAACATTGTTATTCAACAGAGAAAATATATCAGGAATAGGATGTTTCATAATTCTTTTTTTTTAAAGAAAAATGTATGCATTGAGCTGCCACTGCTTACCCGCTTACATTACATGCCAAAAGGGACTTTATTGTTTGATTTTTTTGCTCATTTGTATTTCATGTGAGTACCCTGTTGTCCAGAGGCTTTGAGGGGGAAGTATGCCAATGCAGAGTCAAATATAATGGTACTGAAATTGATGGGGGCCACAACTTTGCATGGTGTTGATGCAAAAACAATGAAGCATCACACTGACCTAAAGATGAGACGGTTTGATCGAATTGTATTTAATTTGCCTCATGCTGGATTCAAAGCAAAAGAGGGTGATATGCGTATGATCAAGTATGTGATCCCTCTTGTCATGATTATCTTTGTTACCGTCAATGTTTGATTGTTCCTAGATCAAGGAAGCTTGTGTTGTTTGCCATATGAATCAGTCGTTTCACAATTTGTGTTATAGAGAAAGTGTATATGTCTTGTACGGCAGTACAAGGAGTTATGCTGTTATGTTGATTTTGTTGAGAAGAAGTATTCACGGATGCAAATGGCTTTAGATATAATCTCTAGGAAGCAGTTCTCTTTTCCAAGTTTAATTCTAGTCAGTTTTGCTCACTGCTAATAGCATAAACCATAAAAACACTGGAATGGATCTTAGCCTCTTAGGTTGTAGTTATGATGTGTGGGAGGCTCTGGCCAGCAAAATAACCTTTTCATAGATGATGGTCATTATTTTTTTAGCTGATGGCCTTCTTGTTGCATTTGGTGAAGGCAGGAACCTGTTTAGAATGTCGTAATGCTTAAACAGGCTGCTGCTTTTGGATATTCTGTTTATTGGTTAACTTTTTATTAACCATTTTCTCTGACTGTTAGCTTGCACAAGGATCTGGTCAGAGGATTCTTCCGCAATGCAAGATGCCTGCTTCGGCCTTCCGGTGAAATCCATGTTAGTCACAAGAGAGGAAAGGTGTATGAAAACTGGGAGATCGAGAAACTAGCCTCTGAATCTTCACTTATTATGGTTGAGAAAGTTGATTTCCATATAGAAGACTATCCTGGTTATAACCACAAGAGAGGAGATGGTCCAAGGTGCGACGAACCTTTCCCTCTAGGTCCTTGTTGCACTTTCAAATTCTCCATCAGAAACCATAAGAAGCAGAAGAAATGTCATTCAAAGAAGATTGGTTCAATCCCATCCCTTGGAGGCAGCCATGTCCATCCTGAAATATTGGCAAGTGACTGGAGTCCATCTCAGCCGTTTCGACCAGTCAATGCAGTTAACATGCCAGTAACTTTCGACCCATACTCACTCAGAATTGCTCAAAGCCATCAACCGGGTTTTCCTGTCAATTTTGTTGGCTTATGGACAGCGGCTGCCTGTTCTCTTCAGCATTGCAATATCCACCCAATGCTCAACATTGTAAGGCCATCGCTTCATCTTTTGCCCATTGCGTCCATCATTGCTCCACAAATGGGCAGAATCACAAGTACCAGTCTCTTTGCACCTCAGGAGCAGCCGAAACCTGTTCTTAGGCCATTGCAAAGCGTTAGCAGCTACGACCTTGCCAGGGAACACCAAATGAATCTGCGGAGGGAGTTTGAGATGAGAGGACAAACAATGCCTGCAGGAACCAGCTTGGATTACTTCGAGTTCCTGGAATATCTCTTCAGGGATCCTGCTGAGAAGGAGAAGTGGCTGCAAACTATGATTACGTTGCACGCTACACGGTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030972