Os10g0562200

From RiceWiki
Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0562200| Description = Similar to Lipase-like protein| Version = NM_001071925.2 GI:297610930 GeneID:4349392| Length = 1605 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0562200

Description

Similar to Lipase-like protein

Version

NM_001071925.2 GI:297610930 GeneID:4349392

Length

1605 bp

Definition

Oryza sativa Japonica Group Os10g0562200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22636064..22637668

Sequence Coding Region

22636064..22637668

Expression

GEO Profiles:Os10g0562200

Genome Context

<gbrowseImage1> name=NC_008403:22636064..22637668 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22636064..22637668 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgccgccgcggtcaccgccacgccgcgccacgcccggccgtctcctctcaacccgaacgccagggccgcggcggcggcggccgccgcggcgccgccgaacgccgtgtccaccaccaggacgcacctcgccaacctcgaccgcctcctcgtccggccgccgccgctccccctgccgctccagaacaagggggcgccgccggccgatgacctcggcgacggcggcggcgccgccaccaccgacgaccggagcggccgctgcgggctgctcaacgcgctcaacctgtccacgttcctgcccttcgtccgcaagccggccgtcgacgagatgtcgccgcgcagcctcgcgcacctgcagcgcctcctcacgctgtcgccgcggccctcgccgaaaggctccatcgccggcgagtggcggaggtatcacagcgagggcggctgggacgggctgctcgacccgctcgaccagaacctccgccgcgaggtcctccgctacggcgacttcgtgcaggccgcgtacacggcgttccactccatgccgtcgtcgtcgtcggcggcggcgtcgcagcacagccagcaccggacgctcgtgctccccgaccggtcgtaccggccgacgcgcagcctgttcgccacgtcgtcgctgtccatcccggcgtgggcgcggcggcggtcggcgcccgggtggctcacgcagcgctccagcttcgtcggctacgtcgccgtctgcgacaacgagggcgaggtccagcgcatgggccgccgggacatcgccatcgtcctgcgcggcacggcgacgtgccccgagtgggcggagaacctccgcgccggcctcgtgccggtcgacgacgacgacgacgacgacgtcggctcgccgcagaacgcgccgaaggtggcgaaggggttcttgagcctgtacaagacggccggcgaccacgtccccagcctctccgacgccatagtcgacgaggtgaggcgcctcgtcgaggtcttcgagggggaggagctgagcatcacggtggtgggacacagcctcggcgcgtcgctcgccgtcctcgccgccgacgagctcagcgcttgcctgtccgcggacgtggctgaacatcgccggcggccaccgccgatcgccgtggtgtccttcggcggcccgaagaccgggaaccgcgcgttcgccgaccgcctccagaacggccgcggcgtgaacgtgctccgcgtggtgaacgccggcgacgtggtgacgcgggtgccggcgccggcgatggcgcgggagggggaggggcacgtgcacgccggcgcggagctgaggctggacagccgcgactcgccgtgcctccgcccggacgccgggccggcgtgctgccacgacctggaggcgtacctccacctgctcgacggcttcgccggctccggccggccgttccgcgccgacgcgagccgcagcgtggcgcggctgctgacctaccagcgtcccaacgtgaggggcgcctacgtcgagcgcgccagggtgctcggcttcgagccggcgacgccgcggaccgccaccgccaacggcgccggcggcggagccgaggggcattacggctacttggctagcccaacatga</cdnaseq>

Protein Sequence

<aaseq>MSAAAVTATPRHARPSPLNPNARAAAAAAAAAPPNAVSTTRTHL ANLDRLLVRPPPLPLPLQNKGAPPADDLGDGGGAATTDDRSGRCGLLNALNLSTFLPF VRKPAVDEMSPRSLAHLQRLLTLSPRPSPKGSIAGEWRRYHSEGGWDGLLDPLDQNLR REVLRYGDFVQAAYTAFHSMPSSSSAAASQHSQHRTLVLPDRSYRPTRSLFATSSLSI PAWARRRSAPGWLTQRSSFVGYVAVCDNEGEVQRMGRRDIAIVLRGTATCPEWAENLR AGLVPVDDDDDDDVGSPQNAPKVAKGFLSLYKTAGDHVPSLSDAIVDEVRRLVEVFEG EELSITVVGHSLGASLAVLAADELSACLSADVAEHRRRPPPIAVVSFGGPKTGNRAFA DRLQNGRGVNVLRVVNAGDVVTRVPAPAMAREGEGHVHAGAELRLDSRDSPCLRPDAG PACCHDLEAYLHLLDGFAGSGRPFRADASRSVARLLTYQRPNVRGAYVERARVLGFEP ATPRTATANGAGGGAEGHYGYLASPT</aaseq>

Gene Sequence

<dnaseqindica>1..1605#atgtccgccgccgcggtcaccgccacgccgcgccacgcccggccgtctcctctcaacccgaacgccagggccgcggcggcggcggccgccgcggcgccgccgaacgccgtgtccaccaccaggacgcacctcgccaacctcgaccgcctcctcgtccggccgccgccgctccccctgccgctccagaacaagggggcgccgccggccgatgacctcggcgacggcggcggcgccgccaccaccgacgaccggagcggccgctgcgggctgctcaacgcgctcaacctgtccacgttcctgcccttcgtccgcaagccggccgtcgacgagatgtcgccgcgcagcctcgcgcacctgcagcgcctcctcacgctgtcgccgcggccctcgccgaaaggctccatcgccggcgagtggcggaggtatcacagcgagggcggctgggacgggctgctcgacccgctcgaccagaacctccgccgcgaggtcctccgctacggcgacttcgtgcaggccgcgtacacggcgttccactccatgccgtcgtcgtcgtcggcggcggcgtcgcagcacagccagcaccggacgctcgtgctccccgaccggtcgtaccggccgacgcgcagcctgttcgccacgtcgtcgctgtccatcccggcgtgggcgcggcggcggtcggcgcccgggtggctcacgcagcgctccagcttcgtcggctacgtcgccgtctgcgacaacgagggcgaggtccagcgcatgggccgccgggacatcgccatcgtcctgcgcggcacggcgacgtgccccgagtgggcggagaacctccgcgccggcctcgtgccggtcgacgacgacgacgacgacgacgtcggctcgccgcagaacgcgccgaaggtggcgaaggggttcttgagcctgtacaagacggccggcgaccacgtccccagcctctccgacgccatagtcgacgaggtgaggcgcctcgtcgaggtcttcgagggggaggagctgagcatcacggtggtgggacacagcctcggcgcgtcgctcgccgtcctcgccgccgacgagctcagcgcttgcctgtccgcggacgtggctgaacatcgccggcggccaccgccgatcgccgtggtgtccttcggcggcccgaagaccgggaaccgcgcgttcgccgaccgcctccagaacggccgcggcgtgaacgtgctccgcgtggtgaacgccggcgacgtggtgacgcgggtgccggcgccggcgatggcgcgggagggggaggggcacgtgcacgccggcgcggagctgaggctggacagccgcgactcgccgtgcctccgcccggacgccgggccggcgtgctgccacgacctggaggcgtacctccacctgctcgacggcttcgccggctccggccggccgttccgcgccgacgcgagccgcagcgtggcgcggctgctgacctaccagcgtcccaacgtgaggggcgcctacgtcgagcgcgccagggtgctcggcttcgagccggcgacgccgcggaccgccaccgccaacggcgccggcggcggagccgaggggcattacggctacttggctagcccaacatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0562200, RefSeq:Os10g0562200