BGIOSGA030988

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Revision as of 09:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030988, complete gene.| tag = OS09G04...")
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Gene Name

BGIOSGA030988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030988, complete gene.

LocusTag

OS09G0482740

Ensembl Transcript ID

BGIOSGA030988-TA

Ensembl Protein ID

BGIOSGA030988-PA

Length

3862

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17227900..17231761

Sequence Coding Region

17227900..17227954,17228101..17228162,17228571..17228639,17228785..17228866,17229347..17229417
,17230021..17230122,17230212..17230301,17230939..17231013,17231109..17231141
,17231216..17231296,17231433..17231492,17231585..17231761

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17227900..17231761 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17227900..17231761 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGCAGACGGGGTTCGCCACCTCCAAGGTCCTCATCCTCGTCGGCGCAGGGTTGACGAGCTCGATCGTGCTGCGGAATGGCCGGCTATCTGACGTGTTGGCGGAGCTTCAGGAGCTTATGAAAGGTGTAAACCAAGGAGAAGGTTCGAGTGCCTATGACATCGCCCTTCTTCAATCTCAGATTCGAAATTTAGCACAAGAAGTTAGAGATTTGACTATATCAAGGCCTATTACCATATTGAGTGGCAACTCCGACTCTGGAGGCAGTTTATCCTCCTACATACTGCCTGCAGCTGCAGTTGGAGCAATGGGTTACTGCTATATGTGGTGGAAGGGATTGTCCTTATCGGATGTCATGTTTGTTACCAAACGCAACATGACCAAAGCTGTTGAGAGTATGTCGAAGCAATTGGATCAAGTGTCTTCAGCTTTAGCTGCAACAAAAAGGCATCTAACTCAGCGCCTGGAAAATTTAGATGGGAAAATGGATGAGCAAGTGGAGGTCTCCAAAATTATTAGAAACGAGGTGAATGATGTCAAAGATGATCTGTCTCAAATTGGATTTGATATTGCAGCAATCCAACAGATGGTTGCTGGATTGGAAGGGAAGATCGAGTTGCTTGATAATAAACAGGATGCAACTAATGCTGGTGTATGGTACCTCTGCCAAATAGCTGGAGGTCTAAAAGATGGAATAAATGCCAAGTTTTTTCAGGAAGCTAATGAAAAACTCAAGCTCACAGAGTTGGCTCAGTCTGAAAGAAAGGCAGTGAAGGGGCTTGAATCTGTTCTGGAGAGCAGAAAGGAACAAAAGGCAATCGACTCCAAACAAAATACCACCGCGATAATTGACGCCGAAAAGCCCGTGAAAACGGTCGATGGGCCTGTGAAAAGCGGCGCGGTGCACAGGTGTAGCAGAATCTCATTTCGGAAGGAAGGCCTCGCTTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAMQTGFATSKVLILVGAGLTSSIVLRNGRLSDVLAELQELMKGVNQGEGSSAYDIALLQSQIRNLAQEVRDLTISRPITILSGNSDSGGSLSSYILPAAAVGAMGYCYMWWKGLSLSDVMFVTKRNMTKAVESMSKQLDQVSSALAATKRHLTQRLENLDGKMDEQVEVSKIIRNEVNDVKDDLSQIGFDIAAIQQMVAGLEGKIELLDNKQDATNAGVWYLCQIAGGLKDGINAKFFQEANEKLKLTELAQSERKAVKGLESVLESRKEQKAIDSKQNTTAIIDAEKPVKTVDGPVKSGAVHRCSRISFRKEGLAL</aaseq>

Gene Sequence

<dnaseqindica>1..55#202..263#672..740#886..967#1448..1518#2122..2223#2313..2402#3040..3114#3210..3242#3317..3397#3534..3593#3686..3862#ATGGCGATGCAGACGGGGTTCGCCACCTCCAAGGTCCTCATCCTCGTCGGCGCAGGTCTCGTCACCGCAACCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCGCTCTACTATATTTTCTAGCATCGATTCGAGATGCGGATCGCCCCGCTGTGTTCTGATCCTGATGCGGTGGTTTTTGGCCGGCGTCGAGCTGCAGGGTTGACGAGCTCGATCGTGCTGCGGAATGGCCGGCTATCTGACGTGTTGGCGGAGCTTCAGGTCGGTGGATTGCCTGATGTTTCTTGAGTAGAGTAGTTGGATTCTGGGCATCTAATTCTGTTGATTGCTTCGCGTTATCGATCGTAAGTTGCCAATACGCTAATATAGGCGCGTCAGTGTTGCCCGTGTGTGATTCAAGCGATGTTGCGATTTATATATCTGTTTGTGGGACTCCAATTTATCAAATGCATTACAGCTACATTTCACCGATCAAACGTTGGGCGTGCACATGAGCATAACTTTTTGTCGCTTAATTTCAATGTCGAATCATTTCGATGCACCAATTGGAATGTCATGCCTAAGTTAATCACCCAATGGCTATGATGATGCGTTCTTCATCTATAATTTGTAGTAACTCATAAAATCGCAGATGTTTATTGAAGTAGATGGTTTTTTCCCTGTTTTTAGGAGCTTATGAAAGGTGTAAACCAAGGAGAAGGTTCGAGTGCCTATGACATCGCCCTTCTTCAATCTCAGGTATGCATCGTTTCATATTTTTCATAGAATCAACAGTTGAATGGAAGTTACAATGCAGACTTCAATTTCAATAAAGTTGCCAGTTTCAGTAAAAACCACTGCAGTTTGTTGTTTTTATTATTTGTGTGCTGGCGCTTGACTGCAGATTCGAAATTTAGCACAAGAAGTTAGAGATTTGACTATATCAAGGCCTATTACCATATTGAGTGGCAACTCCGACTCTGGAGGTTTGTTCTTGTTTGATCCTCTCCTCGTTCTGTTTTCAGTTTCACCCTTCTAGCAGTCATGCAAAGAGTCTATCCATATAAAGCTTTTGTTACATCTTTTTACTTAGATTATTTGTCAATCTTAAGGTTTAGATAGACAATTATTGGCTTGTATCAGCTCCTCTACAAGGCTACCACCCCTTGGTGAAAAAGTGGTCAATAGTCATATTTTTGCTAAAACTCGTTAAAGAGTGTCAATCTCTATTCTCTAATTCAATATTGAGTAATTCATGAAGCTGAAATGCTTCAGCGATTACAGTTTGAATCATGTTGATTGGTCAATAATAGCAATTTAATGACAAATGGGATAGGAATGCTGGTACATTCAGCTGTTTCTCACAACATTCATGAACATATCTCACTAGCTACTTGTCCCCATGTGACATGTATCTTTTTCTTACCTGTGTTGTTTATTCACTAGCATTTGCATCCCTTTTGCAGGCAGTTTATCCTCCTACATACTGCCTGCAGCTGCAGTTGGAGCAATGGGTTACTGCTATATGTGGTGGAAGGTAAAATCAGGAATATACAATGCCACTTTGATCTATCAGCTTTTATATTCTGATTTTTCTTCCTTGCTTTCTTTCTCCACAAACACTCCTTACTATCCTTTTCCTTTTATTATACTTACAGCCTTCAATAAATTAGTAACTGAATGAAGAGAGTAATATGATGTTCCCCATTTGCTTGTTTACCTTGTTTCTTGTAGTTATATGTCTTAAGAACTATGCTACCTAAGTCTCCCTGTAAAGTATTTCCATGCAGTCCCAGTGGTTCTATGTGGATCCAAGTATCCAACTTTGATATATAATTGGCATTTGGCACCCTTGTATGTATTTTGAGACATCATGAATAAACCACATTCTTTTTTTTTTGGGCGGGGGATTAAATTGCTTTCTTAGTCATGTAATAACACCTCTCTGATTCTGTGACCAAATATTCTATCAAGAATCACAGTTTCGGGTTGAGAGACTCTTTTCATGATCCCTAGGCCCTAGTATTTAAGTAAAACCATCAAATCTGTCTTGTCCTAATGGTGTTTGTAGACTAAATTACTAGTACAATGATGAACTGTATGTGTTAAACTTTTCTTACATTATAGTATCTTCCTGCAGGGATTGTCCTTATCGGATGTCATGTTTGTTACCAAACGCAACATGACCAAAGCTGTTGAGAGTATGTCGAAGCAATTGGATCAAGTGTCTTCAGCTTTAGCTGTATGCTTTACATGCTGAATCGTTACATATTTGAAGTAGTTTTCCTTCGCATATGCTGACTAGTGTTTTCTAAATTCAATTAATTTCAGGCAACAAAAAGGCATCTAACTCAGCGCCTGGAAAATTTAGATGGGAAAATGGATGAGCAAGTGGAGGTCTCCAAAATTATTAGAAACGAGGTTTGTTGATTTGTGATGCTGCTAGCCCTTCAACTTTTTACACATGGAAAATTTTGAAGTTCCTTTTTTTTTCTCTGGAGCAATAATTATTGTTTCATTTTTTTCATTACATCAAGTCTAATTAGCATCTGATAACTTTATTATTAAATTGTGTTTCTACCTGAGGTGCATAACTCTTATTAGTTTGATTTGTGTAGTCGCATCTGAAAAGGTGGATCAGGATTTTCTTTGTCATGCCAATATTGTTTCAAGCTAAAAACTGTGCCCTCGATAAAGCCAGGAAGCACTTGACATGGCTATTATAGGATATGCATTGAAATATGGTGGAATTGTTGGCTTTTACTATAATCATTGACAGCATATTCCAAGTGATCGATCTTGCCCATAAACCATAAAACAACATCATGAAGCCAAGAATATATACAAGCGCAAGCATAAGCATAATGATATTTGTCATCAATGAATGGTCTTTAGTTGCATTAAAATATACCTTCTTAAAAATAGCTACTGTAAATCTGCAAGTACTCATCTATGGAAAGATAAATTTTACAGCATTTTTCATTTTCTTCTCGAAAGCAGAAAAGTTTTGTTCTTCCCAATGTTATGCAAAAGACATGATTCTGTTCTCTATGCACAGGTGAATGATGTCAAAGATGATCTGTCTCAAATTGGATTTGATATTGCAGCAATCCAACAGATGGTTGCTGGATTGGTGAGTTTTATTAGTTTATAACCCTTGAGCATGAACCTGTGTCAGAACACTTCTTTGGTTATCCTGACCTTTATCTTCTCCTTTGACATTATCAGGAAGGGAAGATCGAGTTGCTTGATAATAAACAGGTGGCTAAACATACCCATCAATATTTAACGTGCTGATTTTTTCCTTTTGCCTAACCTCTTGTGTTTACCGACAGGATGCAACTAATGCTGGTGTATGGTACCTCTGCCAAATAGCTGGAGGTCTAAAAGATGGAATAAATGCCAAGTTTTTTCAGGTGAGTAGATATCATTTATAAAGGTTCAGGATTGCATGCAAGGTCTAAGGATGCCTTATCTTGGATAGTTCGCTTTTCTTTTGGCTCATACTGCTCATTGTGCTGTAATGATCCTTCTATGCTCTCCATTCCACAGGAAGCTAATGAAAAACTCAAGCTCACAGAGTTGGCTCAGTCTGAAAGAAAGGCAGTGAAGGTAATACACAATTAATATGCAGATGTTTGTCCTCCATTCAGGTAATTTCGGTTTCTTTATGCCAATCCATATCTGTGTTGTGCACATTTTAGGGGCTTGAATCTGTTCTGGAGAGCAGAAAGGAACAAAAGGCAATCGACTCCAAACAAAATACCACCGCGATAATTGACGCCGAAAAGCCCGTGAAAACGGTCGATGGGCCTGTGAAAAGCGGCGCGGTGCACAGGTGTAGCAGAATCTCATTTCGGAAGGAAGGCCTCGCTTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030988

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030988&oldid=30192"