Os09g0299200

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Revision as of 07:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0299200| Description = Homeodomain-like containing protein| Version = NM_001069348.1 GI:115478435 GeneID:4346661| Length = 3730 bp| Defini...")
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Gene Name

Os09g0299200

Description

Homeodomain-like containing protein

Version

NM_001069348.1 GI:115478435 GeneID:4346661

Length

3730 bp

Definition

Oryza sativa Japonica Group Os09g0299200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7895272..7899001

Sequence Coding Region

7896529..7896670,7896879..7896955,7897046..7897088,7897176..7897233,7897822..7897891
,7898102..7898578

Expression

GEO Profiles:Os09g0299200

Genome Context

<gbrowseImage1> name=NC_008402:7895272..7899001 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7895272..7899001 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattaggtggcaacaatatgggcccagataatggagcaaacaacaattccaacttggctgcaaggcaacgcttacggtggacaaatgagctgcacgaacgatttgttgaggctgttactcaacttggtggtcctgatagagcaactccgaaaggagttctaagaattatgggtgtacaagggttgacgatataccatgtgaaaagtcatttgcagaaatacaggcttgcaaagtacattcccgactcttcagctgatggtaacaaggctgaaaacaaagaccctggagatttgcttgctggacttgagggatcctctggcttacagatatctgaagctctgaagctgcagatggaggtccaaaagcgtctacatgaacagttagaagtacaaaggcagctgcagttgcgcattgaggcgcagggcaagtacctcaagaagatcattgaggagcagcagcgtctcggtggagtgaaatctgaaacacctgctgctggtgcttccgtcacattgccaagcgatcagttccctgattccgaaagaactgacccctcgactcctgcacctacatctgaatctccaactcaaggtgtaccttcgaatagggacaatggaggacaaaacgaagcaaccaagagcccccagcgcgatgattctctgtcccgccatgaaccactaacccctgattccaactgtcagcctggttctcctaccgctagtccaaagcatgagagggcagcaaagaggcaacgaggtaatggtgcagagttctcggaaactgacttcgcccttcctcattctatcttcgagtcgagttcggggtcagagttccaacaatgttccatgtcctactcaggtcattag</cdnaseq>

Protein Sequence

<aaseq>MELGGNNMGPDNGANNNSNLAARQRLRWTNELHERFVEAVTQLG GPDRATPKGVLRIMGVQGLTIYHVKSHLQKYRLAKYIPDSSADGNKAENKDPGDLLAG LEGSSGLQISEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVK SETPAAGASVTLPSDQFPDSERTDPSTPAPTSESPTQGVPSNRDNGGQNEATKSPQRD DSLSRHEPLTPDSNCQPGSPTASPKHERAAKRQRGNGAEFSETDFALPHSIFESSSGS EFQQCSMSYSGH</aaseq>

Gene Sequence

<dnaseqindica>1258..1399#1608..1684#1775..1817#1905..1962#2551..2620#2831..3307#ggccacacacacctacgcctacgcggggaagagaagacgagacaagaagaggagaggagagaagagaatctcgtggaattctctccccctctcctcgcctctccaagaacccaccaatcctccccccctccccccccaacactccactggcgccgcacagctccgatcttgcctccgccgccgccttcttccgctcccaattcgggcccgaattcggtccggggggggtttcttggtgcgtcagcgtttcccccccccccccccccccccaaaatttactttgcctctgtagagagaattcccggtaaatttgtgcgtgtttttttgctttccgtgttgagatgttattgctctcgcttttgttcccccaatggaaaagggaaaaaatgcaagcgaggagaggaaaaaaaaaagggcttcctgaggctgacaggtcgggcccacctccgccggagatggcgtgtggcttgcgctgtttgtgatgagttctctggtggtagtaggttggcatatacggggtgctctttgctttgagcatggagctgcaattcgctttgctttgatttcatctttttctactgtgcaattgaagggcatcaagaacatcatgtatcaaagctaatttcatatgtctggcgataggttgtgtgggttgctcccatggagctctttaccttttttttgcctggttataaattgagagcaaaataaataaatactaatggatgataattcgattgatgcaccatgcaagctgtggatgcaagtattcgccttaactatgtatgctggctggttttctgttagagctttgcatctaccatttttatgggtcactctatttgcctaaccttccatgtaaagcagtatggtatgatgaatcaaattggatagatgtattggacagcgttgcacacgctagttttcttggtacaaatggcattttccttgtctatactagtactagtagttctttcctctgcaacaatgaaaacttccctatgtagttaagctcacaaattctagaaacacttgtgactgtcttagagatggacagaaaactgccactgcaactttgcactgattagttgtgtttttgtacttttatcaccggcaaacattgtttgtgatcgctgtttgtaaaactgatatctggctctctgatgtattttttcccaggtgatgatcattgtattaaccaaaacctgaacctagtgttggccctactgtaataattcagtcacttatcagcagcatatggaattaggtggcaacaatatgggcccagataatggagcaaacaacaattccaacttggctgcaaggcaacgcttacggtggacaaatgagctgcacgaacgatttgttgaggctgttactcaacttggtggtcctgatagtatgtattcatactgcaattgttgcaattatgttttcatttattcatttatttgattttatcaaacttatatagagactgttctgtatgatgcttttcttggagacaataactttactgcatgcatgtaatcatgctctcttaccattgaacttattaactgtaaatttctgcttctgctaacacttgaattcctcaaatgcaacaggagcaactccgaaaggagttctaagaattatgggtgtacaagggttgacgatataccatgtgaaaagtcatttgcaggtacatcttgttacagtgtgtcactttccctttaatattttttgtagctagtattttttttatcctatttaattcccctcctgtttctagaaatacaggcttgcaaagtacattcccgactcttcagctgatggtacgcggacaatctcttcatcatgcattgcattttttagtactctggcattcttttagcttatcctaatttttgtctccttggtaggtaacaaggctgaaaacaaagaccctggagatttgcttgctggacttgagggatcctcgtaagtatacataagcctaattatttctccgatatcatatcagtcgttttgtaaaaagaaaaaagaaatgctactgacatactgttatggtatgaaatggaagtatgctggtttgccacattttaccatttaccagtaaatctaccatgaccaactattgaaattattaccattgttgtttgcatgctgccatgctgctcggcaaatatcgctttctagattgtagtccctctgtagttgaaagtatcaaggaataataggctgctgctggattgagattgaaactactactagtattttacacataatttcttctgcccaccatttttggctttcaacatcctcaagaacataaatcctagatactagaaaacaacaaaatatgtgaaataacttaagtctgattaatatgctttttccttttagttgaaaaaattaagtcatttgttattgtgctttctatttatcttctgtaagatttcaatgcctatttatcttttcaatggacagttccattatgttactgttcgattggtgctgttctccacctcaatagtcaatattcatcgtgatattttttttgtacagtggcttacagatatctgaagctctgaagctgcagatggaggtccaaaagcgtctacatgaacagttagaagtaagtttttgtggaagttcctttcagcataaaattgttagcttctaacatttgtactccatccttatatatttattaagcctattccgaagttactaaaatattccaaatctatgcaaagaaattgttctggatgcacatattcttcaaatctttgtgaaatatccagcaaagagcaggccctaatgatatgataaacattctcttcaggtacaaaggcagctgcagttgcgcattgaggcgcagggcaagtacctcaagaagatcattgaggagcagcagcgtctcggtggagtgaaatctgaaacacctgctgctggtgcttccgtcacattgccaagcgatcagttccctgattccgaaagaactgacccctcgactcctgcacctacatctgaatctccaactcaaggtgtaccttcgaatagggacaatggaggacaaaacgaagcaaccaagagcccccagcgcgatgattctctgtcccgccatgaaccactaacccctgattccaactgtcagcctggttctcctaccgctagtccaaagcatgagagggcagcaaagaggcaacgaggtaatggtgcagagttctcggaaactgacttcgcccttcctcattctatcttcgagtcgagttcggggtcagagttccaacaatgttccatgtcctactcaggtcattagcatctggtgatactcctcacagcatcttcgctagcttgttcgagacgaagtaatgatctaagatccgtgttgtagctctcagtagtatatttctaagtcccaatggagatgttggtagacaaaaatgttgtaggtgttcagatgattgtttacatgatactacatatgacagctatttaagcttgtaatttcgtggcctgtaaattttattatcagctgttgagttgggaagtttgaaggttgcgctttgtcgcggcgtcgacttctgctcatctgggtaaatctttattgacaaaagtgtttaacatgaacaatttttcgcgtgtaatttgttgtaaacttgtaatggtcagtggtcagaagcacaagctgttgatgttatgctgttacacttggatgttactatcatggttacttttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0299200, RefSeq:Os09g0299200