Os10g0562700

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0562700| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001071927.1 GI:115483449 GeneID:4349394| ...")
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Gene Name

Os10g0562700

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001071927.1 GI:115483449 GeneID:4349394

Length

3841 bp

Definition

Oryza sativa Japonica Group Os10g0562700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22653612..22657452

Sequence Coding Region

22653857..22654655,22654748..22654971,22656029..22656216,22656360..22657452

Expression

GEO Profiles:Os10g0562700

Genome Context

<gbrowseImage1> name=NC_008403:22653612..22657452 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22653612..22657452 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcacggcgtcgaaggtggagcaggaggacacggtgcggcggtgcaaggagcggcggcggcacatgaaggaggcggtggcgtcgcggcagcagctggcgtcggcgcacgccgactacctccgctccctccgcctcaccgccgccgcgctctcccgcttcgcgcagggccacccgtcgctcgccgtgtcgcaccacaccgcgccggtgctcctcaccacggccgcgcccgcgctggcgccgacgccgacgccgccgccgccgtcatccacggcgtcgtcctcgctcccgccaccgacgccgctgctccccaagcaccagcaggcgccgccgccgccaccgcccacgcagtcgcatcagccgcctcctcccgtggcggtgagggctccccgcggcgggccgcgtcgcctcaaggtgccgcacatcctgtccgactccagcgtcgccagcccggcgcggtcgtcgttccggaagccggtggtggggacgccgtcgtcgtcgtcggcgtgggactgggagaacttctacccgccgtcgccgccggactccgagttcttcgaccgccgcaaggccgacctcgaggaggccaaccgcctccgcgagctcgaggaggaggagaaggcccggggctacctccacccccaccacctcaaggaagaggacgaggtcgacgacgacgacgacgagagggaggaggagatgcattgcggcggatgggaggacgacgacgaccactacgcgtcgacgaccacctcggagaccagatcggaggagggggaaatggggaacagatcggagtgcggcttcgcggccagatcggagtacggcggcacggcgccgtcggagtacgccgccgcgccgctgccactgccgctgaggaggagggacgagaggtcggaggccggggactcctcctccacggtcacggcggccgccgagatgcggatggtgatccgccaccgcacgctggcggagatcgtggccgccatcgaggagtactttgtcaaggcggccgaggccggcaatggcgtctcggagctcctggaggctagccgcgcgcagctggaccgcaacttccggcagctcaaaaagacggtgtaccactcgaacagcttgctatcgtcgctgtcgtcgacatggacttcaaagccaccattggctgttcgctacaagttggacaccaatgcgttagagatggagtcaatggaagggaagagccatgggtcgacactggagcgtcttttggcctgggagaaaaagctctatcaggaggtcaaggctagagagagcgttaagattgagcacgagaagaagctttctactctgcagagcctggagtacagagggagggatagtaccaagctggataagaccaaggcctccataaacaagctgcaatcgttgatcatcgtgacttcacaggccgcaactaccacatcctcagccattgtcagggtgcgtgacaatgagcttgcaccacagcttgtcgagctttgcttcgcgctgttgagcatgtggagatcaatgaaccatttccatgagatccagaatgaaattgttcagcaagtccgtggtctggtagacaattccatggctgagtcaacatctgatcttcaccggcttgccacccgtgatcttgaggctgctgtctcagcatggcactcaaacttcaaccgtctcatcaagtatcaacgtgattatatacgtgccctctatggctggctgaagctcacactcttccaagtggacagtaatatcccacaagaggcttacacctcgctgatctctcgtgaactcaccaccttctgtgatgagtggaagcaagcactggaccggcttccagatgcttcggcttcggaggctatcaagagcttcgtgaatgttgtccatgtcatctacactaagcaggcagaggagatgaaaataaaaaagcggacagagacatattcaaaggagctggaaaagaagaccaactcacttcgagccattgagaagaagtactaccaatcctattcaatggttggccttggccttcctggcagtgggcgcgatggcattgaaagccattcgttcgatgcccgcgatcctcttgcagagaagaaaaccgagattgcccaatgtcggcggaaggtggaggacgaaatgacaaggcatgctaaggcagtggaggtaactagatcaatgacactgaacaacatccaaacaggcctgccaggaatgttccaagccatagctggtttctcaggaacagttgttgaagcccttgacgttgtctgcaggcgagctggatcggtgcggtag</cdnaseq>

Protein Sequence

<aaseq>MGCTASKVEQEDTVRRCKERRRHMKEAVASRQQLASAHADYLRS LRLTAAALSRFAQGHPSLAVSHHTAPVLLTTAAPALAPTPTPPPPSSTASSSLPPPTP LLPKHQQAPPPPPPTQSHQPPPPVAVRAPRGGPRRLKVPHILSDSSVASPARSSFRKP VVGTPSSSSAWDWENFYPPSPPDSEFFDRRKADLEEANRLRELEEEEKARGYLHPHHL KEEDEVDDDDDEREEEMHCGGWEDDDDHYASTTTSETRSEEGEMGNRSECGFAARSEY GGTAPSEYAAAPLPLPLRRRDERSEAGDSSSTVTAAAEMRMVIRHRTLAEIVAAIEEY FVKAAEAGNGVSELLEASRAQLDRNFRQLKKTVYHSNSLLSSLSSTWTSKPPLAVRYK LDTNALEMESMEGKSHGSTLERLLAWEKKLYQEVKARESVKIEHEKKLSTLQSLEYRG RDSTKLDKTKASINKLQSLIIVTSQAATTTSSAIVRVRDNELAPQLVELCFALLSMWR SMNHFHEIQNEIVQQVRGLVDNSMAESTSDLHRLATRDLEAAVSAWHSNFNRLIKYQR DYIRALYGWLKLTLFQVDSNIPQEAYTSLISRELTTFCDEWKQALDRLPDASASEAIK SFVNVVHVIYTKQAEEMKIKKRTETYSKELEKKTNSLRAIEKKYYQSYSMVGLGLPGS GRDGIESHSFDARDPLAEKKTEIAQCRRKVEDEMTRHAKAVEVTRSMTLNNIQTGLPG MFQAIAGFSGTVVEALDVVCRRAGSVR</aaseq>

Gene Sequence

<dnaseqindica>2798..3596#2482..2705#1237..1424#1..1093#atggggtgcacggcgtcgaaggtggagcaggaggacacggtgcggcggtgcaaggagcggcggcggcacatgaaggaggcggtggcgtcgcggcagcagctggcgtcggcgcacgccgactacctccgctccctccgcctcaccgccgccgcgctctcccgcttcgcgcagggccacccgtcgctcgccgtgtcgcaccacaccgcgccggtgctcctcaccacggccgcgcccgcgctggcgccgacgccgacgccgccgccgccgtcatccacggcgtcgtcctcgctcccgccaccgacgccgctgctccccaagcaccagcaggcgccgccgccgccaccgcccacgcagtcgcatcagccgcctcctcccgtggcggtgagggctccccgcggcgggccgcgtcgcctcaaggtgccgcacatcctgtccgactccagcgtcgccagcccggcgcggtcgtcgttccggaagccggtggtggggacgccgtcgtcgtcgtcggcgtgggactgggagaacttctacccgccgtcgccgccggactccgagttcttcgaccgccgcaaggccgacctcgaggaggccaaccgcctccgcgagctcgaggaggaggagaaggcccggggctacctccacccccaccacctcaaggaagaggacgaggtcgacgacgacgacgacgagagggaggaggagatgcattgcggcggatgggaggacgacgacgaccactacgcgtcgacgaccacctcggagaccagatcggaggagggggaaatggggaacagatcggagtgcggcttcgcggccagatcggagtacggcggcacggcgccgtcggagtacgccgccgcgccgctgccactgccgctgaggaggagggacgagaggtcggaggccggggactcctcctccacggtcacggcggccgccgagatgcggatggtgatccgccaccgcacgctggcggagatcgtggccgccatcgaggagtactttgtcaaggcggccgaggccggcaatggcgtctcggagctcctggaggctagccgcgcgcagctggaccgcaacttccggcagctcaaaagtaatcagagattcatagcagacatattatgcttgaacaaaaactataatgtggtttgaattggtgtggcaatgtacatttttagtgaaaaaacgcaagcaattgcttaacaatttcacttaatttgacttcttcttttgcagagacggtgtaccactcgaacagcttgctatcgtcgctgtcgtcgacatggacttcaaagccaccattggctgttcgctacaagttggacaccaatgcgttagagatggagtcaatggaagggaagagccatgggtcgacactggagcgtcttttggcctgggagaaaaagctctatcaggaggtcaaggtaattctgctcatcgacgcttgattacaatgccattcttgactgctggttagtggttatacttaatagatgagcacaccactaaaattgaggtgtttgtttgctgtgacattttttgttgcacgcctcaatcattcgttgtcggtgaagcatcttcaaactattcacttggctccacttgaaaattatccagctatatatatttgctagagcatagtagtggactaaccgataatttaggtcactgcacaactttagcagcaatgcaagtttaatgaggtgtaatcttctagtagccacccttgttggatgctagaatagaatgcatgaactgttgcacttggcattgcagcataggcctacctagcagtcaaataatcaaggatgaattgaggctaactttaacacttctggtgtagcttctaatcgattaggtgaagcttcacctcatttgaaattggtgttttgagcagcccgccttttgttcagcaaatgtggtagaagaatctgattctattgcataaagcgtctttacagaggtcctgcacttgcctaccctggattctgaaacagctgtagcatttggttgataatttttcactactttcagtaaaggaagcaggcacaatacatggccattgatctctcaaccacaccttcatatacccttcctttatgctctttttatatctaaactactcctgtcctttgagattctttgtggctttgtgggtgaaggtttagatcctcaagaaattgtctttactgcacataaatatacctcataatgccaaaggtagatttagcgtatctatgtctaaagcaccagagtccagagatgtttaggcctttaggggcattacccttggtaggcatgagacttataccatatctattcgataattgagtgagactaaccaatgttctttttatttctgcaatctagaacataatggattcttactgtccggtgtctactaaatgcttctattctctaagcagtttatgaaactttattgaaactattcccatatgtattaactttttactgcttcaggctagagagagcgttaagattgagcacgagaagaagctttctactctgcagagcctggagtacagagggagggatagtaccaagctggataagaccaaggcctccataaacaagctgcaatcgttgatcatcgtgacttcacaggccgcaactaccacatcctcagccattgtcagggtgcgtgacaatgagcttgcaccacagcttgtcgagctttgcttcgcgtaagacttgttccctgttctgacatctatgataccagattttgcgacattgtgtgcaagtatttaaattgtatctgaatattgatatgcaggctgttgagcatgtggagatcaatgaaccatttccatgagatccagaatgaaattgttcagcaagtccgtggtctggtagacaattccatggctgagtcaacatctgatcttcaccggcttgccacccgtgatcttgaggctgctgtctcagcatggcactcaaacttcaaccgtctcatcaagtatcaacgtgattatatacgtgccctctatggctggctgaagctcacactcttccaagtggacagtaatatcccacaagaggcttacacctcgctgatctctcgtgaactcaccaccttctgtgatgagtggaagcaagcactggaccggcttccagatgcttcggcttcggaggctatcaagagcttcgtgaatgttgtccatgtcatctacactaagcaggcagaggagatgaaaataaaaaagcggacagagacatattcaaaggagctggaaaagaagaccaactcacttcgagccattgagaagaagtactaccaatcctattcaatggttggccttggccttcctggcagtgggcgcgatggcattgaaagccattcgttcgatgcccgcgatcctcttgcagagaagaaaaccgagattgcccaatgtcggcggaaggtggaggacgaaatgacaaggcatgctaaggcagtggaggtaactagatcaatgacactgaacaacatccaaacaggcctgccaggaatgttccaagccatagctggtttctcaggaacagttgttgaagcccttgacgttgtctgcaggcgagctggatcggtgcggtagaagcttgcgctgccagactttccaagaaaccgttcgttaagtctttttgggtggttcagtaatttatatagggaaaatgcaatatatatagctaaaattagtgatgagaatatgggggagaaggctcccttgatgttttgccttgttgggagttggtcattttggttgtagataaatgattttactcaggattgttgatgttcttttgcttgtcctgtgaagtgcaagggaagattacattgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0562700, RefSeq:Os10g0562700