BGIOSGA031000

From RiceWiki
Revision as of 09:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031000| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031000, complete gene.| tag = OS09G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031000

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031000, complete gene.

LocusTag

OS09G0484900

Ensembl Transcript ID

BGIOSGA031000-TA

Ensembl Protein ID

BGIOSGA031000-PA

Length

2574

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17363835..17366408

Sequence Coding Region

17363835..17364275,17364371..17364875,17365139..17365182,17365507..17365602,17365698..17366208
,17366374..17366408

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17363835..17366408 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17363835..17366408 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCGAGGCGCAGCCACTGGGAGAGCTCGTCGGAGGACGTGACGAGGCCGCTGCTCCCGCTGCACGACGACGACGGCGCGGCGGGCCGGCGCTCCTGCGCCGCGCTGAGGTCGCTGCTCGCCAACAAGTACCTGGCGGTCGCGTCGGGCCCCGTGGCGTGCGCGCTGATATGCGGCCTCGTCGACCTCGGCGGCCACCGCGCCGCGCGCAACATGCTCGGGGTGCTCGCCTGGGTGTTCCTGTGGTGGATTACCGACGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCCGTGTTCGGCATCTCCTCCTCCGACGCCGTCGCCAAGGCCTACATGGACGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCGCTCGCCATCGAGCACTACAACATCCACCGCCGCCTCGCTCTCAACATCACGTCGCTGTTCTGCGGCGACCCGGTGAAGCCGCCGCTGCTGCTGCTGGGAATCTGCGGCACCACCATGTTCATCAGCATGTGGATCCACAACACGCCGTGCACCGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGCGGTTCCCGCGCGTCGACGGGGCGTCGTCCTCGGCGAGCAGCGCCGCGGACGCGCGGGAGGTGCAGCGGTTCTCCAAGGCGGTGGTGCTCGGCGTCGTGTACGCGTCGGCGATCGGCGGGATGGCGACGCTGACGGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCCACCTACTTCCCGGAGCAGCCGCCCATCACCTTCAGCTCGTGGATGTCGTTCGGGCTCCCATTGGCGCTCGTCCTCTTCGTCGCGCTCTGGGCCACGCTCTGCGTCCTGTACTGCTCCAAGAACACCGGGAGGGCGCTCTCAGCTTACCTGGACAGGAGCCATCTCAGGAGGGAGCTCAGCTTGCTTGGTCCTATGGCTTTTGCAGAGAAGATGGTTCTAGCCGTTTTTGGGGGTTTGATTGTCCTATGGATGACGAGGAGCCTGACAGATGATATTCCTGGGTGGGGATCACTCTTCCACGGCGAAGTTGGGGATGGAACTGTCACTATCATGATGGCGACGCTGCTGTTCATAATCCCGAGCGGCAAGAACGACGGCGAGAAGCTCATGGACTGGGGCAAGTGCCGGAGGCTGCAGTGGAACATCATCCTCCTCCTCGGCGCCGGCTTCGCCATCGCCGACGGCTTCAGGGCGAGCGGCCTGACCGACATCCTCTCCGAGGGGCTCGGCTTCCTCCGCGGCGCGCCGGCGCTGGCCATCGCGCCCGTGGCGTGCGTCTTCAGCGGCGCCATCACCGAGTTCACCTCCGACGACGCGACCGCCACGCTGGTGCTCCCGCTGCTCGCCGAGCTGGGCAAGTCCATCGGCGTGCACCCGCTCCTCCTCATGGTCCCCGGCGCCGTCGGCGCGCAGCTGTCCTACCTGCTGCCCACCGGCTCGCCGGGCAACGTCGTCGGCTTCAGCACGGGCTACATCAGCATCAAGGACATGGTGATCGCCGGAACGCCCCTGAAAATTGTCGGGGTTGCAGCTCTCACCATCCTACTGCCAACGTTAGGATCCGTCGTTTTTGGCATGGATCAGAAGCTATAG</cdnaseq>

Protein Sequence

<aaseq>MDPRRSHWESSSEDVTRPLLPLHDDDGAAGRRSCAALRSLLANKYLAVASGPVACALICGLVDLGGHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISSSDAVAKAYMDDVISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGTTMFISMWIHNTPCTVMMMPVATGILQRFPRVDGASSSASSAADAREVQRFSKAVVLGVVYASAIGGMATLTGTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVLYCSKNTGRALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWGSLFHGEVGDGTVTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGFRASGLTDILSEGLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIGVHPLLLMVPGAVGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILLPTLGSVVFGMDQKL</aaseq>

Gene Sequence

<dnaseqindica>1..441#537..1041#1305..1348#1673..1768#1864..2374#2540..2574#ATGGATCCGAGGCGCAGCCACTGGGAGAGCTCGTCGGAGGACGTGACGAGGCCGCTGCTCCCGCTGCACGACGACGACGGCGCGGCGGGCCGGCGCTCCTGCGCCGCGCTGAGGTCGCTGCTCGCCAACAAGTACCTGGCGGTCGCGTCGGGCCCCGTGGCGTGCGCGCTGATATGCGGCCTCGTCGACCTCGGCGGCCACCGCGCCGCGCGCAACATGCTCGGGGTGCTCGCCTGGGTGTTCCTGTGGTGGATTACCGACGCCGTGCCGCTCGCCGTCGCGTCCATGGCGCCGCTGTTCCTCTTCCCCGTGTTCGGCATCTCCTCCTCCGACGCCGTCGCCAAGGCCTACATGGACGACGTCATCTCCCTCGTCCTCGGCAGCTTCATCCTCGCGCTCGCCATCGAGCACTACAACATCCACCGCCGCCTCGCTCTCAACGTACGTGATCCGCGCCGCGAGCCCGTCTTTACCAAGCCCGTTCGTCCGAACCGTGCAACTAACAATCCAAGGAAAACCCGCGAACTTTGTTGCAGATCACGTCGCTGTTCTGCGGCGACCCGGTGAAGCCGCCGCTGCTGCTGCTGGGAATCTGCGGCACCACCATGTTCATCAGCATGTGGATCCACAACACGCCGTGCACCGTCATGATGATGCCGGTGGCGACGGGGATCCTGCAGCGGTTCCCGCGCGTCGACGGGGCGTCGTCCTCGGCGAGCAGCGCCGCGGACGCGCGGGAGGTGCAGCGGTTCTCCAAGGCGGTGGTGCTCGGCGTCGTGTACGCGTCGGCGATCGGCGGGATGGCGACGCTGACGGGCACCGGCGTGAACATCATCCTGGTGGGGATGTGGTCCACCTACTTCCCGGAGCAGCCGCCCATCACCTTCAGCTCGTGGATGTCGTTCGGGCTCCCATTGGCGCTCGTCCTCTTCGTCGCGCTCTGGGCCACGCTCTGCGTCCTGTACTGCTCCAAGAACACCGGGAGGGCGCTCTCAGCTTACCTGGACAGGAGCCATCTCAGGAGGGAGCTCAGCTTGCTTGGTAGGTTCTCGTTCTTGCTCTGTTTGTTTGTTACTTCACGGCAATGGCCAGTGCTCATCAATGGCGTGGTCAATGTTATTCTGGGGTTATCTCTGAAACTCTGACAGCTTCTCGGCCAATATTTCCTGAAACCTGGGTAACTCTGAAATGGACCTCGTTTTGGTCTTTTTCTCCATAACAGTGGCACTCATTGAAATATCAGTGCCATGATAATTATTGCCATAATGGATTCTGATTCGGTTGTCCATCTTGATTTGTGACAGGTCCTATGGCTTTTGCAGAGAAGATGGTTCTAGCCGTTTTTGGGGTAAGTTCCGTTTCCATTTCTGGGGTTATAGCAATTATCTCAACCTGGAAACAGTGTTCGGTTAGAGCATCTCCAACAAAGGGCTAAAATTAAAGCCCCAAAAATCCTATATTGGGGACAGCCAAAAACTAATTTGGCCTATAAAACACCCCCTTCTCCAAGAGATGCCTGAAATTTTAGTTCCCAAAATTTTAAAATTTGCCACATCATCACTGGTGGGCCCTTCTCAACTAATTTTGTGCAGGTTCGTTATTATGACGCGATCATGGAGGGGTTCGTTATAGTGTGACAAAATTTTAATGTATCCATAATTGATTCTTGCAGGGTTTGATTGTCCTATGGATGACGAGGAGCCTGACAGATGATATTCCTGGGTGGGGATCACTCTTCCACGGCGAAGTTGGGGATGGAACTGTCACTGTAAGCGCACCAAGGATCGAACAAATTCTGATTTGTTTTCTCAGAGACGATTTGTCACATGATCTCACGGGACAACAACTTGGCTCGCAATGCAGATCATGATGGCGACGCTGCTGTTCATAATCCCGAGCGGCAAGAACGACGGCGAGAAGCTCATGGACTGGGGCAAGTGCCGGAGGCTGCAGTGGAACATCATCCTCCTCCTCGGCGCCGGCTTCGCCATCGCCGACGGCTTCAGGGCGAGCGGCCTGACCGACATCCTCTCCGAGGGGCTCGGCTTCCTCCGCGGCGCGCCGGCGCTGGCCATCGCGCCCGTGGCGTGCGTCTTCAGCGGCGCCATCACCGAGTTCACCTCCGACGACGCGACCGCCACGCTGGTGCTCCCGCTGCTCGCCGAGCTGGGCAAGTCCATCGGCGTGCACCCGCTCCTCCTCATGGTCCCCGGCGCCGTCGGCGCGCAGCTGTCCTACCTGCTGCCCACCGGCTCGCCGGGCAACGTCGTCGGCTTCAGCACGGGCTACATCAGCATCAAGGACATGGTGATCGCCGGAACGCCCCTGAAAATTGTCGGGGTTGCAGCTCTCACCATCCTACTGCCAACGTTAGGTAAATTAACTGACAAGTGACAACTCTCTAGTCTCTACACAACCGAGAATTCAGACAGTGAAAATACTTGCCGTATCATACTTGTAACTTACTGATTGACGTACAATCCTTTTGCGTTTTCGCGAAGGAAAAAACTTACTGATTTGTTTTCTTGATGTCATGCAGGATCCGTCGTTTTTGGCATGGATCAGAAGCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031000