BGIOSGA031016

From RiceWiki
Revision as of 09:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031016| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031016, complete gene.| tag = OS09G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031016

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031016, complete gene.

LocusTag

OS09G0493400

Ensembl Transcript ID

BGIOSGA031016-TA

Ensembl Protein ID

BGIOSGA031016-PA

Length

3649

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17754666..17758314

Sequence Coding Region

17754666..17754772,17755440..17755500,17755635..17755748,17756031..17756162,17756259..17756363
,17756505..17756899,17757023..17757122,17757226..17757285,17757367..17757453
,17757638..17757766,17758015..17758314

Genome Context

<gbrowseImage1> name=IndicaChromosome09:17754666..17758314 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:17754666..17758314 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGGCTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGTCACAGAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACTGCAAACCTAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAGAGCAAATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAAAGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGGAATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCAGTGTTACGAGTGAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTTTGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAACAGTCTCAGATACTAAAAGTGAGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTTCTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTGCTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCAGTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCCCTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATAATGAACAAAAGAACATAGGCATGATAATTGTCCCAAGGATACGAATAGATGCTGACAAGTTTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTCCCTGATTCAACGGCTTGAAAAAATTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAATGCTTTAGTCATGCATGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCACGGACATGATTCTGAAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTAGGATGCCAATCCCATCGTCCTTCGCTGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDRASRSGVLSETASFADTPRSIYSSCNLQHLQSQSIRKIHEGALDISPRFSYCKPNASQDKILHRRFSLNLPEQMPGHYSRTVTERNQKAASKSITDLVVEIAALEQEVVRKELHLLSLYRKAFDQYLSESGSVTSEVDQELLKNIDEGALRLKDIKQSAAFNLPTVSDTKSEVSRSPSRHSSLVNFLSASISEYVPKISCKLSEDILSCIAAVYCKLGSVPLQDSEYITSPSPSVSSSSTFSPRNRNDSWSPRYNFDITPSPRQYGYEKENNEQKNIGMIIVPRIRIDADKFDYASKMLETIRSLIQRLEKIDPTKMTHEEQLCFWINIHNALVMHAFLAYGLHDKRMKSTDMILKAAYNVGGQSVNAQIIQNSILGCQSHRPSLWVRALFAPTKRSMAGTARHPYALQHPEPVAHFALSTGAFSDPPVRLYSAKKIHQQLEVARTEFIQANVVARRQALMLPKVLHYYAKDAALELRHVVELVCESISEAQQREIQLCLRRRIDKCVEWLPYKSSFRYVVHRDLAE</aaseq>

Gene Sequence

<dnaseqindica>1..107#775..835#970..1083#1366..1497#1594..1698#1840..2234#2358..2457#2561..2620#2702..2788#2973..3101#3350..3649#ATGGATAGGGCGTCAAGATCAGGTGTTCTTTCAGAGACGGCTTCTTTCGCCGACACTCCGAGGTCCATCTATTCGTCCTGCAATCTCCAGCATCTTCAGTCACAGAGGTTTGCGCTTCTCTCAGAGTATATTAGTCCATAAAAAAACTAATTTTCTTCTCGAGCTTGTGCAATTCAGTGTCAATTTCAATTCGTAAGTTATCTCCTGCATTGAGTAAGCAGGAATGAGTAATTTACAAGTTCTGAATTGGTATTTGGGGAAAAAAACTGATGAAAGAGCACTGAAAAGGGAGCTGTGTCTAGAATCCAATCCGTAATTAAGTGTGCTATTCAGTCTGTCCCATCATTCATACGCACATAGGGAGTAATTTTGCTGAACTTTAGTTCGGCATCTAATTAATTTGGTACATTACTCAGCAACCGTCCCTCTTCAGTCCACATTGAATACCTCTTGACCACATACATGTAGTTCTTGTACGGCTCCACTGTACATTAGTGTTCAGAGTTCACTAGAACACCATTTGACCACATGGTATACAAACACAAAAAATAGTTTTGAACAAAATTAAGCATAAGGATATAGTTATAAAATGATTTTTTATATATATTTGTGAATTTGCGCAAGAATGTACTATCCATGTAGTGTCCGCTATACCTATCTTCTCGTACTGTTTTTTTTTGGGACTTGTATTTTTTGATGAAGGCTTGAATTGCTTAGTTAACTTTCAATTTGTTGTGTAATTTGATTGAATGAATTTTATTTTTTTCATTTTAGTATCCGGAAGATACATGAAGGTGCCTTGGATATATCGCCACGATTCTCCTACTGCAAACCTGTAAGTATACCATTTTCACTTCATTCGCCATTCGGCGCAGAAATAAAAAGTTATTCTACAGTTATTATCGCCAGACTAGACCCTTGCATATATTGCATACAAGTACTTGATTTTGATTTTACCACATCATACAGAATGCTAGTCAGGACAAGATACTGCACAGAAGATTCTCACTTAACTTGCCAGAGCAAATGCCAGGCCATTACTCCAGGACAGTAACTGAAAGAAATCAAAAGGCTGCTTCAAAGGTCTGATACAATTCATGGAAAATTGTTTCGATATTTTTAAATATGATCAAATATGAAGAAATTCATGCCTTCTATTCATGTGAGAGTTTGTTCTACTTTTTTTTTCATTAGTAGAACCATAGAGTACAGTAATTACACCCCTAGTGTGCATGGACATTACTAATCCAGATCAATGCACAATGAAAGCTGAAAGTTATAAAAAAACTGGGATGAATGATAATGAGTTAATCTATGGCCATTTATTATAGATGTATTCTTAGTCTTGATCTTGCATTACTGCAGTCCATCACAGATCTAGTCGTGGAGATTGCGGCCCTTGAGCAGGAAGTCGTCCGAAAGGAATTGCATCTGCTATCCCTCTATAGAAAAGCATTTGATCAGTATTTATCGGAGTCTGGCAGTGTTACGAGTGAGGTACGTTATTAAGGATGATACACAAATCAGCAGAAATCATGTGATGGCTAGTATAAAGGCCAAATATTCATGTGCTAAGATTAATGCCATTGACAGGTGGATCAAGAATTGCTGAAAAACATTGACGAGGGTGCCCTTCGTTTGAAAGACATCAAGCAATCTGCAGCCTTCAACTTACCAACAGTCTCAGATACTAAAAGTGTGCGAACCTTTTATCTTCATTTATTTATTTTATGAAAATGCAACAGCTCATTTGAACGGACACAGACCACACTATTATCTCCTTTTAGTAACATAATCTTTGTATTTGAAAACACCTGACTCCGCTCTCATATTTTGCAGGAGGTATCAAGATCACCTTCAAGGCATTCCAGCCTTGTTAACTTCTTGAGTGCATCTATTTCTGAATATGTACCCAAGATCTCTTGCAAACTATCAGAAGACATTCTGAGCTGCATAGCTGCTGTCTACTGTAAACTCGGAAGCGTGCCACTGCAAGATAGCGAATACATAACCTCCCCCAGTCCTTCTGTTTCATCTTCAAGTACTTTTTCTCCGAGGAACCGCAATGATAGCTGGAGCCCTCGGTACAACTTCGATATCACCCCGAGCCCTCGCCAATATGGATACGAGAAAGAGAATAATGAACAAAAGAACATAGGCATGATAATTGTCCCAAGGATACGAATAGATGCTGACAAGTTTGATTACGCCTCAAAAATGCTTGAGACTATCAGGTAAGCATTTAAAATAAGAAAATTACAAAAAAAAAAGTCACTTATTTAATCATGTGAACTTTTCTGCCATAATGTTAGATGCGTCAATTAGTGAGCTGTATAATTGTTCATAATGTTTCCCAGGTCCCTGATTCAACGGCTTGAAAAAATTGACCCAACAAAGATGACACACGAGGAGCAACTCTGCTTTTGGATTAACATCCACAATGCTTTAGTCATGCATGTAATGCTCTATACTAAAATCGGATATCACCTTAGCTATGTTCAGTATTAGCCTCAGAAATCAGATAATGGTATTTAACCTAAACTGCTTTGTAATATATCAGGCATTTTTGGCCTACGGGCTGCACGATAAACGCATGAAAAGCACGGACATGATTCTGAAGGTACATCCTATTCTCTAGTCTTTAACTTCACTCATTTTCATATATGAATATTTCTGACCATTCTGACAAATATATTGCCAGGCTGCGTATAATGTTGGTGGGCAGTCAGTAAACGCTCAAATAATCCAGAACTCAATTCTAGGATGCCAATCCCATCGTCCTTCGCTGGTATGTCTGCCTTTCATTTCCATTAACAAGACAGACATTTCTCTCTAAAATCATCAACACTTTGACAGTATAAATAGTTAAATGCAATCATATGAAAGAAACAGTGTACGGATAAACCAGAGACCACCGTAAAAGTTGCCATTGTGGCAAACTAACAACGGAATCTTGTACACCGTTTTCGCAGTGGGTTCGGGCGCTGTTCGCACCAACGAAGAGATCCATGGCAGGGACAGCCAGGCATCCATATGCCCTTCAGCATCCAGAGCCAGTTGCTCATTTTGCCCTCTCCACTGGAGCATTTTCAGATCCACCTGTAAGCCACCACTTCCAGCCATACTTCAATCAAGAAAATTTTTACGGTCTTCGAGTAGGTACCATATTTTTCTATCGCAAAATTTGGTACTACCCAAGGTACTACTACAAGTACAAGGTAGTACCAGATTCAACGCTAGAAAAAGCTGTACTTCCTGTACCTCTCAAGGACGGTAAAAAATGACTCCAAACATCCATGTAAAAAAAAAAGGAAATATCAAAGCTGTAAGTTGGATCTTGTGTTTGTAGGTGAGGCTGTACAGTGCGAAGAAGATACACCAGCAGCTGGAGGTGGCGAGGACGGAGTTCATCCAGGCGAACGTGGTGGCGAGGAGGCAGGCGCTGATGCTGCCCAAGGTGCTGCACTACTACGCCAAGGACGCGGCGCTGGAGCTGCGGCATGTGGTGGAGCTGGTGTGCGAGAGCATCTCGGAGGCGCAGCAGCGGGAGATCCAGCTCTGCCTCAGGAGGAGGATCGACAAGTGCGTCGAGTGGCTGCCCTACAAGTCCTCCTTCAGATACGTTGTACATAGGGACCTGGCCGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031016

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031016&oldid=30220"