BGIOSGA031050

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Revision as of 09:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031050| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031050, complete gene.| tag = OS09G05...")
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Gene Name

BGIOSGA031050

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031050, complete gene.

LocusTag

OS09G0506200

Ensembl Transcript ID

BGIOSGA031050-TA

Ensembl Protein ID

BGIOSGA031050-PA

Length

5728

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18282708..18288435

Sequence Coding Region

18282708..18282739,18283189..18283267,18284158..18284979,18285072..18285224,18285309..18285528
,18287353..18287387,18287815..18287967,18288052..18288435

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18282708..18288435 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18282708..18288435 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGATGCTGGATCCGAAGCGTCTCATGAAGGGCTCATTCTGTCACCACGTTGCAGATTCTGAAGGCGCCAAAAGAACAAGATATTCAGTGCCTAGCCTTCCAGAGGAAATCTGGTGCCATATACACTCCCTAATGTCATTCAAAGATGCTGCTCGTGCAGCATGCGTGTCTCGTGCTTTTCGTCATTCCTGGCGATGCCATCCCAATCTTATATGTTGTATTGGAATACTGGGCTCGGATTTCATCAACAAATTTGACCGCATTATGAAAAATCACTCAGGAATTGGCATCAAGTCGGTAAAGTTTCAATATAATAGTTTTTACAATACTAGAAGGAGCACTAGCATCAGCCATCATTTCGATAGTTGGCATCAGATTGCTATTACACCGTGGATCGAAGAACTCACCATTAGCCTATCTCTATCTTCATTCAATATGGAGTACAGCTTCCCATGCTCACTTCTAGCTGATGGGAGAGCAAGCTCAATGCGGCATCTTTATCTTGGCAATTGTGGATTCCATCCCACAATCAACCTTGACTTGAGAAACCTGACAAGGCTGCATCTGATTAATGTACATATTACAGGAGATGAGTTAGGGTGCCTTCTCTCAAATTCTCATTGTTTGGAGCAGTTAGAACTTATGTATTGCAATGGAATAATTTGTCTGAAGATACCTTCCCTGTTGCAGTGCCTCAGTCACCTAGAAGTGTTTGATTGCAGAATTCTTCAAGTAGTTGAGAATAAGGCTCCAAATCTTTGCAGTTTTGACTTTGGAGGTAGGCAGGTACAACTCTTGCTTGGCGAATCGTTGCGAATGAAGAGACTATCCTTGCACTACCCCGATGCTATGTATTATGCTCATGCAAAGCTTCCATCCAATGCGCCAAATCTTGAAACTCTCGCCCTCGAATGCTCGACTGACAAGATGGTTGATACACCAATATTGCCTAGCAAATTCTTCCATCTCAAGTGCTTGACCATTGATCATACCATTATCTCATCTTCCCCAGCTTATAATTATCTTTACCTGGTTTATTTTCTCGACGCTTGCCCTTCCTTGGAGACTTTCCTTTTGGGTATATCGCAGAACCACATGGAGCATGACTCGATTATTGGAGATTCCTCACATATGAGGCAAATGCCAGGACACCGTCATGACAACCTCCGGAGTGTGGAGATCACCGGTTTCTACTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAGTTGCACTCAAGTACCTTACACTGGATACAACTCGTGGTTTTTTCAGCTGTTCTACAGCGTCATGGGGAAGCGGCGGCACATCCGAGGCCGTGATGGTTGATACACCAATATTGCCTAGCAAATTCCTCCATCTCAAGTGCTTGACCATTGATCATACCATTATCTCATCTTCCCCAGCTTATAATTATCTTTACCTGGTTTATTTTCTCGACGCTTGCCCTTCCTTGGAGACTTTCCTTTTGGGTATATCGCAGAACCACATGGAGCATGACTCGATTATTGGAGATTCCTCACATATGAGGCAAATGCCAGGACACCGTCATGACAACCTCCGGAGTGTGGAGATCACCGGTTTCTACTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAGTTGCACTCAAGTACCTTACATTGGATACAACTCGTGGTTTTTTCAGCTGTTCTACAGGTGAACACGACAGATGCTTTCCTATGGACAAAATCATGATAACGGAAGCCAACAGGGCAGTCCTGGCTATCCAAACATACATCGAGCGAAAAGTTCCTTCCACGGTCAAGCTAAATGTTGTGAAGCCTTGCAGCCGTTGCCATGCTGTTGAATCATATTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MGKMLDPKRLMKGSFCHHVADSEGAKRTRYSVPSLPEEIWCHIHSLMSFKDAARAACVSRAFRHSWRCHPNLICCIGILGSDFINKFDRIMKNHSGIGIKSVKFQYNSFYNTRRSTSISHHFDSWHQIAITPWIEELTISLSLSSFNMEYSFPCSLLADGRASSMRHLYLGNCGFHPTINLDLRNLTRLHLINVHITGDELGCLLSNSHCLEQLELMYCNGIICLKIPSLLQCLSHLEVFDCRILQVVENKAPNLCSFDFGGRQVQLLLGESLRMKRLSLHYPDAMYYAHAKLPSNAPNLETLALECSTDKMVDTPILPSKFFHLKCLTIDHTIISSSPAYNYLYLVYFLDACPSLETFLLGISQNHMEHDSIIGDSSHMRQMPGHRHDNLRSVEITGFYSAKSLIELTCYILDNTVALKYLTLDTTRGFFSCSTASWGSGGTSEAVMVDTPILPSKFLHLKCLTIDHTIISSSPAYNYLYLVYFLDACPSLETFLLGISQNHMEHDSIIGDSSHMRQMPGHRHDNLRSVEITGFYSAKSLIELTCYILDNTVALKYLTLDTTRGFFSCSTGEHDRCFPMDKIMITEANRAVLAIQTYIERKVPSTVKLNVVKPCSRCHAVESYL</aaseq>

Gene Sequence

<dnaseqindica>1..32#482..560#1451..2272#2365..2517#2602..2821#4646..4680#5108..5260#5345..5728#ATGGGGAAGATGCTGGATCCGAAGCGTCTCATGTCTGCGCGACAGGAGCGGCATCGCCGTCGGCGGCGACGGCAACTCCGACCCCGCAGTAGCCCTCCCTCTCCTACCTTCTTCTTCAGCAATTGTGTTTGATAGCCACGATTGCTTTTTTGGGGAAAAAAAGAGCATCTCGCTTGCAAGCAATTCAAGAAGGGGCAATGGGACATTATGATCTGTGGAATTTAGGAACAAAATAGTGTAGAATTGTTTTTTTCTTTTGGGAGGTAAAAGGTAGCAATGCTCGGTTGAATTTGATTTGTAGGAAGTAATGAAACAAATTGGAGTGAATACCCGCTCTTTTCACAAAAAGCTGGACAACTGAACCAAATTGAATTGTTCGTGTTCATTCATGTGCTTTGATCTGATGTTTTCCCCTGTTGATTGATGTCTGCATATAACCACGCAAATGATGTGTTTGTTCAATTGCTTCACTGGCTAAAAGGAAGGGCTCATTCTGTCACCACGTTGCAGATTCTGAAGGCGCCAAAAGAACAAGATATTCAGTGCCTAGCCTTCCAGAGGTATGGTACCTAATGCTGATAAGAAATACTTATATTAGAAGCAAAGTGGGTCACTATGATTCTATGACTGCTCTAAGTAGTCTCTAACTACACACTGGTGGTCATATGGTGGCTAGATCAAAAGGATTGAGATCCTCTACCTTCAAACTCAAAGGTACCATGTCTTTGTCACTGACAGATGGGTCCATGGTTCATTGGGCCTACATGTTAGTGACAAAGGCACGTGCCTTTGAAGTTAGAGGAGCCTGATCCAGATTTATGAACAGATATTTAGAGCTGCAATCTTCTACAATTCTGCATGAGGGCACCTTTTCTCTGTTCTAGCTGTTGCTCCTTTATCACTCAAGCAGAAAATTGTTTGTGATGGCGTCACCTTAATAATCTTGTTAAGGCAGTTCACTTTCTAAAGGTTCTTCCTCACTTATCAGCGGGTTCCTGTACTTCTTTTATGTGATTACTCTGGTCTCGACCAGTTTCCTGATGATCAATGTTTATGTTTACCAGAACCCCCAATGTGCGATTTGTCCTTAAGATACATGTTTATTTTTTTCTTCATTACCTTTGACTAATTTATAGGATGATATTGTAGGGAGAAAAGCATCATTTCATACATAACATTGTTGACTACCGCTGCATACTTCAAGCAAGAATAGGTTTCATACTATGTGATCATAATTAGTCACTGGCTACAATCTGCTTTATCTTTTTCCCGATAGCCACTAAGAAAACTTTGAAAGGGAAAAGGAGAAAAATGAAAATGTGCCGTTCAGTTTGCGTACCACAAATCCCAAAGAGCTATTCCTTATAAGCTACTAATAATACTGCTTTCCCTTCCAATTGAACCTTCACAATTCTTTTAAAAAAACTTTTATCCTTGCTTGTGCTTGTAGGAAATCTGGTGCCATATACACTCCCTAATGTCATTCAAAGATGCTGCTCGTGCAGCATGCGTGTCTCGTGCTTTTCGTCATTCCTGGCGATGCCATCCCAATCTTATATGTTGTATTGGAATACTGGGCTCGGATTTCATCAACAAATTTGACCGCATTATGAAAAATCACTCAGGAATTGGCATCAAGTCGGTAAAGTTTCAATATAATAGTTTTTACAATACTAGAAGGAGCACTAGCATCAGCCATCATTTCGATAGTTGGCATCAGATTGCTATTACACCGTGGATCGAAGAACTCACCATTAGCCTATCTCTATCTTCATTCAATATGGAGTACAGCTTCCCATGCTCACTTCTAGCTGATGGGAGAGCAAGCTCAATGCGGCATCTTTATCTTGGCAATTGTGGATTCCATCCCACAATCAACCTTGACTTGAGAAACCTGACAAGGCTGCATCTGATTAATGTACATATTACAGGAGATGAGTTAGGGTGCCTTCTCTCAAATTCTCATTGTTTGGAGCAGTTAGAACTTATGTATTGCAATGGAATAATTTGTCTGAAGATACCTTCCCTGTTGCAGTGCCTCAGTCACCTAGAAGTGTTTGATTGCAGAATTCTTCAAGTAGTTGAGAATAAGGCTCCAAATCTTTGCAGTTTTGACTTTGGAGGTAGGCAGGTACAACTCTTGCTTGGCGAATCGTTGCGAATGAAGAGACTATCCTTGCACTACCCCGATGCTATGTATTATGCTCATGCAAAGCTTCCATCCAATGCGCCAAATCTTGAAACTCTCGCCCTCGAATGCTCGACTGACAAGGTACTCAAAAAACATAAATGATCATAGACTTGTGATGTCCATATAACAATATTCATGCCTTCAGCCTGATGATCTTTATGCTTTTTATGCAGATGGTTGATACACCAATATTGCCTAGCAAATTCTTCCATCTCAAGTGCTTGACCATTGATCATACCATTATCTCATCTTCCCCAGCTTATAATTATCTTTACCTGGTTTATTTTCTCGACGCTTGCCCTTCCTTGGAGACTTTCCTTTTGGGTGTAAGTCAATTTTAATCCTGCAAACTTATGATTAAGTGACTAGCCCATCAAATGAAAAAGTTTATTATTGGTTTTCATGTCCAGATATCGCAGAACCACATGGAGCATGACTCGATTATTGGAGATTCCTCACATATGAGGCAAATGCCAGGACACCGTCATGACAACCTCCGGAGTGTGGAGATCACCGGTTTCTACTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAGTTGCACTCAAGTACCTTACACTGGATACAACTCGTGGTTTTTTCAGCTGTTCTACAGGTGAACACGACAGATGCTTTCCTATGGACAAAATCATGATAACGGAAGCCAACAGGGCAGTCCTGGCTATCCAAAACATACATCGAGCGAAAAGTTCCTTCCACGGTCAAGCTAAATGTTGTGAAGCCTTGCAGCCGTTGCCATGCTGTTGAATCATATTTGTAATTATTATTTTTCTTCAACTTAATTTTCTTGGTAATTCGGTGATTTTAAAGTGTCCGGTGCTCTCTCTCTTGAACTACTCATTAGAATTGTCCAATAGATAATTATATAGTTTTGCTTTTATCATCAAATCTTGAACAGGATAATACAATTACTATAACTTTTGCTTGTGAAATTTTAACCATGGTGCATCAGATGTATTGCAAGTTCCCTTATATTAACAGAAAGAAGGGAGAATATTTGTTCTAAAGTGTCAGGTTAACAAAAAAAAAAGGTGTAACCAAAACTGACGCGCGGAGAATATTTGCAAGTTTCCGTTTTATCATTAGAAAATATGAACGACCAAGATTCAAATAAAATGAAAAGAATGTTTTTTTTTGGAATACATAAGGGCAACATATCCTATGCACACAGACCCTCCTCACGTGTACACACGTGCACACCAACTAAAAAATATCACCAAAAAATCTAGAAAAAATCATACACATACTTTCAATTGTATTACACCTAGGGTTAAAATCTTAACATCAAATTCATTATATTTTAGCCATAACAAAAAAAACAAAAAATCTGACAGTTTTAAGGTTGCAATTTTGTCAGAATTTTATCTTTTTTGTTATTCTCTATATAGAATGAATTTGAAGATGCGACTTTGCACGTAGATGTAATACTATTGAAAGTACATGTATGAATTTTCCTAAAAATTTTTGTGATAATTTTTAGTTGGTGTACACGGTGTGTACACACGAGGGTCTGTGTGCATAGGATACGTTCCCATACATAAGAAGCACATTTTGTATCAAGGAGAAGTAAAAGTTATTTACAGGGATAATACAAAAGGGGGGAAGGGGACATGATAAAGGAAGGAAAACCAAAGAAACTACTCCCCCGTACCTTAATACAAGGAATTTTGACATTTTGTTTGTACTGTTTGACCACGTGTTTTATTTAAAAAAATTGTATAAATATAAAAAACAAAAAGTTGTGCTTAAAATACTTTGGATAATAAAGCAAGTCTAAAAAAATAATTCCAAATTTTTTTAATAGGACAAAGGTAAAATAATATAAGTAAAATGTCAAAATTTCTTATATTAAGGGACGGAGAGAGTAAAGAGTAAGATCTAATCTCGCAATGACTGGTGCGACCAAACATTCCCATCCGACAAACGAAGTGTCAGAATCGCCATCTTTGCTAGGAAAATGAGAAGAAACTTAACAGGACTGGATAAGATGCAGCGGCCGTACGTGTTTCTCCGTAAGTCAAAAAAAAAAGCTGATTTTTTTTTATTAAAACAACATTTGTCCAGATTTTATCAGTTCATTAATGATCTGGGCAAAATTCAAAGATACTAGTATCATCTATGGAAGGTTTTTATTCGGTATTAGGACTATGAACCTGAATAGATCAGAGTATCAGACCGTAGTACTACAAATCCCTCCGTTCCATATTACGATGAGTTAAATATCTCCTTTCTCTCGCACCTAGCAGCGCAACTCCGCGAGGCTCCAGATCAGGGCGACGACGACGTACGGCCTCCGGCGAGTTCTCATCTCCTCCTCCTCTCCCCTTGAACAAGCGAAATATATAGGCGGAGAGAGAGGGAGAAGAGCGGCGAAATCGTCGATTTCTCTGCTTGATATCGGATCCCTCCGCCGCGTCAGCGTCATGGGGAAGCGGCGGCACATCCGAGGCCGTGGTAAGCTTCCCTCCATCGTGCCTCCTGCCTCTCTAATCTAATCTCCATATATACCGTCTTTGCCATCTGTAACCTGTTCATATTACTGTCGGCCGTCGCAACAACATTTACTCGGCAATGTTTGTGTGATATTCGCAGTTTTCTTTTTGTTAGACCGACACTACTACAGACAAGATTTCCCCGTGCGGTTGTACGGCCCGTCTGCAGCCGGGTGTCTGGGAAAATCAGCATTTTTGCGTGGGGCAGACCGACCGCACGGGATATATCCCGTTCGGTTGTGTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTCAAAAAACATAAATGATCATAGACTTGTGATGTCCATATAACAATATTCATGCCGTCAGCCTGATGATCTTTATGCTTTTTATGCAGATGGTTGATACACCAATATTGCCTAGCAAATTCCTCCATCTCAAGTGCTTGACCATTGATCATACCATTATCTCATCTTCCCCAGCTTATAATTATCTTTACCTGGTTTATTTTCTCGACGCTTGCCCTTCCTTGGAGACTTTCCTTTTGGGTGTAAGTCAATTTTAATCCTGCAAACTTATGATTAAGTGACTAGCCCATCAAATGAAAAAGTTTATTATTGGTTTTCATGTCCAGATATCGCAGAACCACATGGAGCATGACTCGATTATTGGAGATTCCTCACATATGAGGCAAATGCCAGGACACCGTCATGACAACCTCCGGAGTGTGGAGATCACCGGTTTCTACTCTGCAAAGAGCTTGATCGAGCTAACATGTTATATTCTTGACAATACAGTTGCACTCAAGTACCTTACATTGGATACAACTCGTGGTTTTTTCAGCTGTTCTACAGGTGAACACGACAGATGCTTTCCTATGGACAAAATCATGATAACGGAAGCCAACAGGGCAGTCCTGGCTATCCAAACATACATCGAGCGAAAAGTTCCTTCCACGGTCAAGCTAAATGTTGTGAAGCCTTGCAGCCGTTGCCATGCTGTTGAATCATATTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031050