Os10g0563500

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0563500| Description = Protein kinase-like domain containing protein| Version = NM_001071934.1 GI:115483463 GeneID:4349401| Length = 4420 b...")
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Gene Name

Os10g0563500

Description

Protein kinase-like domain containing protein

Version

NM_001071934.1 GI:115483463 GeneID:4349401

Length

4420 bp

Definition

Oryza sativa Japonica Group Os10g0563500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22703028..22707447

Sequence Coding Region

22703149..22703530,22703622..22703695,22704324..22705298,22705472..22705538,22705620..22705682
,22705856..22705919,22706017..22706110,22706207..22706290,22706378..22706467
,22706563..22706590,22706972..22707447

Expression

GEO Profiles:Os10g0563500

Genome Context

<gbrowseImage1> name=NC_008403:22703028..22707447 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22703028..22707447 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactccaaggctgccggctcgtcggagatcgagcgggcgtggcacctcctcaccgtggtcatccgcctcggccggcccgccgccgcctccgacgtcgcgcgcttcgcgaccgccgacgacgtcgagcggctgtgccgcatccccgggtcgccgcttcggctctccgggggcgtcgtggcggcttccgagacggccttcgtggcgttcctgaggtacgtggggttggatgttccgccgccgagggtgagcccgagggcgcccgatgatgtgatgaggtggttgcggaggcgggtgcccgttacgtacgagcgcaagcggaaggcgtcagatgcggggcgcttcgtcgcgaggaagcgtctcctggcggctcccgatgcagatttgccggaacacgagctgcggcagtcgcagcaactgatcgtgcaaagctgtgctccagttgctactggagaggtacatcaggaggctacccaagaattgcaagacaggcttcctagtctcaacatatttactgctcagcgttcctttgaagtttcaattggctctaatgtattttcagacattgaaattagcatgccttctcttccgtccaagattgaccagtttataggaggcaatgatggcagtgttcttgtgagcatggcttctgcactagtgccaaaggaggtgacagacatgtctggctgtatcaatatcttccatgctacagttgacagagagagtactaggattggtgaacctgaaggatcagcttcactttgttgttctagagtagaggaccgtgaggaactagaaaaggagtccaccctccttactatggcagttggcttagctgtgggaaagaaaaatgggattgagcaggatctgaatcttagacctagcagtcctagaaattgtagcacaaaggcaacagatgatatggaaacgttcgatgtgatttcgaaagaagctgaagctctacaatattgcagcccaaatgctcaatacccacagaagatcctaacttgtggtcaggacagtgatgctctagtagttaatgctcatgtggcaattcatgagaataagatagaagacattacattccagcctcctgaaggcaccaaaacagaagctattgtacatgaaatggtccatgaaactatgggaagtttgtgtcaaccttcttcaaacacaaaggttgaacatgcagtgttgccactacaagccccaacttatggttgcattagcaatgagaacttgaacattgctgctgaaaacagagcaagcacacatcaaaatcatgtggagccatcaacacagaacgaagtggctgtcagattatctaagaaagagcaagatagaaagattatgaagcaaagggataagggcaagaaaaaagaagcactgcccaaagaagataaggatcaagttgcagcaaaggttcaaaagggtcatacagaaccaaaaccactgcctaacttcaaaaattttgaaattgaagaagaggaaggttcagggggttacgggactgtttatagggctcgaagaaaatcagatggaagactgtttgccataaaatgtcctcatgcaaatgctcattcacatcatgtttacaatgaacagaagatgttggaacgctttggaggcaagaatttcgtgattaaatatgagtgctctcttaggagtggtgatctagaatgctttgttctagaacatgttgagcacgatagaccagagaatctgagaaaagaaataggtttgtttgatttaaggtggtatgggttttgtctgttcaaagctctggcaagcttacataagcaggggatagtgcatagagatgtcaaacctggaaatttcctgttctcccgtaaactggcaaaggggtatcttattgacttcaacttggcaaatgaccttcaccagaagttctttcgaaacagtaaatctgagacaatctcacgtgggaaggataccatatctcagcctgcactgaagtctaccccagtggttcaggccaaagaaccagttgccgattcaaagcagctccttggatccaagaggaaaagatccaacagaagcccagtgggtagtgcacctaagaatgataataaaagtaggcatggtatccaagctgctgatgtgtctggtgtaacctctgccaaggatcctacaagcacgaaaacatcattagacaggttgaagcagccaatgccctacaaagggcggaaggaattaatgaacttcttgcatgatgcaatgcaaagtcctgacaaaaatacttcgacagcacctgtttcccaaaggaagagggttgctgctcctctcggaaatgtggatcagaagctctttatactcaccccgatgcccctgtgttcgggtggtagtgctattgctggttctggcatgcttaacagc</cdnaseq>

Protein Sequence

<aaseq>MDSKAAGSSEIERAWHLLTVVIRLGRPAAASDVARFATADDVER LCRIPGSPLRLSGGVVAASETAFVAFLRYVGLDVPPPRVSPRAPDDVMRWLRRRVPVT YERKRKASDAGRFVARKRLLAAPDADLPEHELRQSQQLIVQSCAPVATGEVHQEATQE LQDRLPSLNIFTAQRSFEVSIGSNVFSDIEISMPSLPSKIDQFIGGNDGSVLVSMASA LVPKEVTDMSGCINIFHATVDRESTRIGEPEGSASLCCSRVEDREELEKESTLLTMAV GLAVGKKNGIEQDLNLRPSSPRNCSTKATDDMETFDVISKEAEALQYCSPNAQYPQKI LTCGQDSDALVVNAHVAIHENKIEDITFQPPEGTKTEAIVHEMVHETMGSLCQPSSNT KVEHAVLPLQAPTYGCISNENLNIAAENRASTHQNHVEPSTQNEVAVRLSKKEQDRKI MKQRDKGKKKEALPKEDKDQVAAKVQKGHTEPKPLPNFKNFEIEEEEGSGGYGTVYRA RRKSDGRLFAIKCPHANAHSHHVYNEQKMLERFGGKNFVIKYECSLRSGDLECFVLEH VEHDRPENLRKEIGLFDLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAKGYL IDFNLANDLHQKFFRNSKSETISRGKDTISQPALKSTPVVQAKEPVADSKQLLGSKRK RSNRSPVGSAPKNDNKSRHGIQAADVSGVTSAKDPTSTKTSLDRLKQPMPYKGRKELM NFLHDAMQSPDKNTSTAPVSQRKRVAAPLGNVDQKLFILTPMPLCSGGSAIAGSGMLN S</aaseq>

Gene Sequence

<dnaseqindica>122..503#595..668#1297..2271#2445..2511#2593..2655#2829..2892#2990..3083#3180..3263#3351..3440#3536..3563#3945..4420#gtgttccccccattctctctcccattccccaaatcctccgcggcggcggcgcctcctcctcccatgccttccgagcactagcgcggcagatccgatccgagccccctccgccctatctccgatggactccaaggctgccggctcgtcggagatcgagcgggcgtggcacctcctcaccgtggtcatccgcctcggccggcccgccgccgcctccgacgtcgcgcgcttcgcgaccgccgacgacgtcgagcggctgtgccgcatccccgggtcgccgcttcggctctccgggggcgtcgtggcggcttccgagacggccttcgtggcgttcctgaggtacgtggggttggatgttccgccgccgagggtgagcccgagggcgcccgatgatgtgatgaggtggttgcggaggcgggtgcccgttacgtacgagcgcaagcggaaggcgtcagatgcggggcgcttcgtcgcgaggaagcgtctcctggcggctcccgatgcaggttactttgcttgtttttctgtactgatgttggtttatgcggagccatcagtagtgtggttttgaactccatttgggaaaattttgtacagatttgccggaacacgagctgcggcagtcgcagcaactgatcgtgcaaagctgtgctccagttgctactggagaggtgtgctatctctttcaaccttcaagtttttctagtcgcagaaatatcatggtgcagtaacacaatgcataactgctctagtagctttgctgtagataatgcagggaaaattaggttatcacactgagggcttgttcggttaatccccacgagtacaggattaattccatacctaatcccctccgaagccccttgtggagggattagccaaacaaggcctgaatctgctgtcctacatttctgatttactttttgctcgataattaattacaattggggcttggtctgctccttctgtggacatttctcactgcaaatgacgagagagatttctttagttgactatttgactattttggtcactaggttgatgctacctattgaattgacctgcaatgttctcagtgattttatgaaataagctatgcagtccaatgctttgatacacatatttttatggacatatcatactctcaaaatggatgaccccatgaaagataattctcttgaatatgtctcaagtttgtatgttagtcttgatcttgaccctccaagtagttaaaactttcattattagtagaattcacctattacttcatttttctcttctttctgtgtcttgcctcaggtacatcaggaggctacccaagaattgcaagacaggcttcctagtctcaacatatttactgctcagcgttcctttgaagtttcaattggctctaatgtattttcagacattgaaattagcatgccttctcttccgtccaagattgaccagtttataggaggcaatgatggcagtgttcttgtgagcatggcttctgcactagtgccaaaggaggtgacagacatgtctggctgtatcaatatcttccatgctacagttgacagagagagtactaggattggtgaacctgaaggatcagcttcactttgttgttctagagtagaggaccgtgaggaactagaaaaggagtccaccctccttactatggcagttggcttagctgtgggaaagaaaaatgggattgagcaggatctgaatcttagacctagcagtcctagaaattgtagcacaaaggcaacagatgatatggaaacgttcgatgtgatttcgaaagaagctgaagctctacaatattgcagcccaaatgctcaatacccacagaagatcctaacttgtggtcaggacagtgatgctctagtagttaatgctcatgtggcaattcatgagaataagatagaagacattacattccagcctcctgaaggcaccaaaacagaagctattgtacatgaaatggtccatgaaactatgggaagtttgtgtcaaccttcttcaaacacaaaggttgaacatgcagtgttgccactacaagccccaacttatggttgcattagcaatgagaacttgaacattgctgctgaaaacagagcaagcacacatcaaaatcatgtggagccatcaacacagaacgaagtggctgtcagattatctaagaaagagcaagatagaaagattatgaagcaaagggataagggcaagaaaaaagaagcactgcccaaagaagataaggatcaagttgcagcaaaggttcaaaaggttagtttgtccacatgatgatgactcaactgttgctatttcaggttctttctatttatgaacagtttcatgcactactgatgtgttgtaaccatcatgaaccttgtatttcttttgaaaaatagcttatactgatcttcaaaaaatgatttattgaatgttgctgcttgcagggtcatacagaaccaaaaccactgcctaacttcaaaaattttgaaattgaagaagaggaaggttcaggtgagaatttctaaatattctgttaaaactttcttggtttatattgattgctgaccaatgtgaatgtttacgcatactcagggggttacgggactgtttatagggctcgaagaaaatcagatggaagactgtttgccataaaatgtgtgtacatctctttgctagtctcgatttgatgttttttcatgtggatttgttgatctataaatgtatcttctgttgttttgtcttttgacagtctcagtcatctttctataattatatggctaagatctttacaagagttaaccctgcacctgtattttttttattaacaggtcctcatgcaaatgctcattcacatcatgtttacaatgaacagaagatgttggaacgctttgggtactaataagttcatgtcctccgaaaattttataatgatatttttcttgttccatgcagtaactttaaacatatgtatcatgtttttctgctgcagaggcaagaatttcgtgattaaatatgagtgctctcttaggagtggtgatctagaatgctttgttctagaacatgttgagcacgatagaccagaggttgaaacactcatgttgtctctgatgtttatttttccttttattggctattcatattggtccatcttttgttgaatatttcttttatctctgcagaatctgagaaaagaaataggtttgtttgatttaaggtggtatgggttttgtctgttcaaagctctggcaagcttacataagcaggtctggttaaatgcatgttaccttagtcaactgctaacttgcgtttgtcaccagcttatcttggatatctgatatttctgtttccaggggatagtgcatagagatgtcaaacctggaaatttcctgttctcccgtaaactggcaaaggggtatcttattgacttcaacttggcaaatgttagtgcatatacttatctcccaatctgatgctcgccttctgttttctttatgctaattttaacattttgtgttttccctgaaaatccatgcaggaccttcaccagaagttctttcgaaacagtaagttcactttctaagtttcgaattttgttttgaatttcgatggttaattgcagtgcattgattgttatctgttctgtgttattgcctcttccagttttaggctctctgtactgaatatagctcttgaaaatttccatgccgctaataatatcctgggaaatattccactttggagcattttatcttagtgttggcatgttagcattattaaattattccaacagttagtccaaggtttggaatgattaggctatttgaggtggtaacgaatttattttttgaaaatgcattctgcttcttattaaatgcatttcaaactcttcagatttggaatgttttaagactgttgctgactgatattttggtttaattggttaggtaaatctgagacaatctcacgtgggaaggataccatatctcagcctgcactgaagtctaccccagtggttcaggccaaagaaccagttgccgattcaaagcagctccttggatccaagaggaaaagatccaacagaagcccagtgggtagtgcacctaagaatgataataaaagtaggcatggtatccaagctgctgatgtgtctggtgtaacctctgccaaggatcctacaagcacgaaaacatcattagacaggttgaagcagccaatgccctacaaagggcggaaggaattaatgaacttcttgcatgatgcaatgcaaagtcctgacaaaaatacttcgacagcacctgtttcccaaaggaagagggttgctgctcctctcggaaatgtggatcagaagctctttatactcaccccgatgcccctgtgttcgggtggtagtgctattgctggttctggcatgcttaacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0563500, RefSeq:Os10g0563500