BGIOSGA031082

From RiceWiki
Revision as of 09:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031082| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031082, complete gene.| tag = OsI_320...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031082

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031082, complete gene.

LocusTag

OsI_32022

Ensembl Transcript ID

BGIOSGA031082-TA

Ensembl Protein ID

BGIOSGA031082-PA

Length

2454

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18772706..18775159

Sequence Coding Region

18772706..18772853,18772969..18773066,18773130..18773214,18773553..18773623,18773722..18773812
,18773895..18773970,18774088..18774166,18774650..18775159

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18772706..18775159 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18772706..18775159 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGGCGGCGGCGGCGGCGCCGCGAGCGCGGTGTTCTACGCGGAGAAGTACCACCCGATCCAGGCGGGCAGCATCGACGGCACCGACGTCGCCCCCCACGACAACGCCGTCCTCCGCGCCCTCCTCTGCTCCACCGCCGGCCTCTATGATCCGTTCGGGGACCCCAAGGCCACCGGCGACCCCTACTGCACGGTGTTCGTCGGGAGACTCTCCCGCTACACCGACGACGAGACACTCCGGAAGTTCTTGTTTCTCGTTGTGTATGTGAGAGAGCAGGAGATGAGCAGATATGGGAGGGTGAAGAGCATGCGGCTGGTGCGGGATATTGTTACTGGTGCTTCTCGTGGCTACGCATTTGTTGAGTATGAAACTGACAGGGAGATGCGCCGTGCCTATGAGGATGCACACCATTCCATTATTGATGGCAGAGAAGTGCTTGTAGATTACTACAGGCAACAACTTATGCCTGGATGGATACCGAGGAGATCAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCCTTGAGGCCAATTCCGTATGATGAACTAAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTTCCCCCACCACCAAGACGAAAAAGCGGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAGCACCCATAGGCGGAAAGGTAGCCATGACCGGCGAGAAGAAACCGAGAGGAGGACAAGAGCATATGTCAGCAGAGAGGCCGGCAGCTACAGTAAGCGGAGCCCAACCGAAGACGATGGTGATCGTCGTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGAGACTACAGCCACTAG</cdnaseq>

Protein Sequence

<aaseq>MSGGGGGAASAVFYAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKFLFLVVYVREQEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGREVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDELKRLGIPPPPEGRYMTRYQVPPPPRRKSGDIYREESPPKRRSKDRVDSSHYRRYCSPTQDDDSTVSTHRRKGSHDRREETERRTRAYVSREAGSYSKRSPTEDDGDRRKRRRSREPGELSPYKEDDDNSKRGRSSVEPGFSPYQSHHHRHHRERHDSSSHSRHGERRHQDDRGNHSRNRRSESRDYSH</aaseq>

Gene Sequence

<dnaseqindica>1..148#264..361#425..509#848..918#1017..1107#1190..1265#1383..1461#1945..2454#ATGAGCGGCGGCGGCGGCGGCGCCGCGAGCGCGGTGTTCTACGCGGAGAAGTACCACCCGATCCAGGCGGGCAGCATCGACGGCACCGACGTCGCCCCCCACGACAACGCCGTCCTCCGCGCCCTCCTCTGCTCCACCGCCGGCCTCTGTGCGTGCTCTCCTCCCCCTCCTCCTCCTTTTGCTCCACGCGGAGAAGAGCGCGAACGCCGCCGCAGCTCCCTCACTGACTCGGTTGGGGTTCGGTTTCCGATTTTCGTTTTCAGATGATCCGTTCGGGGACCCCAAGGCCACCGGCGACCCCTACTGCACGGTGTTCGTCGGGAGACTCTCCCGCTACACCGACGACGAGACACTCCGGAAGGTGCGCGGATTCCCTTTGGTGTGTGTTGTACTATTATCTTTGCTCGTTTTCTCATGGCTGGAGTTCTTGTTTCTCGTTGTGTATGTGAGAGAGCAGGAGATGAGCAGATATGGGAGGGTGAAGAGCATGCGGCTGGTGCGGGATATTGGTGAGTTTAACCATTGTGATTCATGAAAACGTTGCTTTTACTTTTTGAAGCATGGTTCATTTGTAATTGTAATGGTTATTGAACATAGCATCCATACAATTTATATTATGCCAATGCAAATTGACGTTGTATTCTGCGCGGTCTTGATAACACATTGGAGCATTGATATATAAGAAAATGGGAAGTGCTGTCCTGAATTTTGGAACTGTACCTTTAGCGGCTATTGAGTTGTCGGTAGGCAGCAAATAGCAGTGCTTCACTGGAGCAACATGCCAGCATCTCATCCTTTTTCGCTTTTGCAAATTCAGTTTTTACTAACCGAATTACTTGATTTTCAGTTACTGGTGCTTCTCGTGGCTACGCATTTGTTGAGTATGAAACTGACAGGGAGATGCGCCGTGCCTATGAGGTTATATGATGTTCTTATTTCTACTGCCTGTTTGTTTCCTTCTTAATTCTTAGTACACTTGAAATATAAAAGAATACATGTTACTTTTGGGTCTATAGGATGCACACCATTCCATTATTGATGGCAGAGAAGTGCTTGTAGATTACTACAGGCAACAACTTATGCCTGGATGGATACCGAGGAGATCAGGTGTGGTTCTCTGCCGAAGTTTTATGCAGAGCTAAAAATACTTGAGATGGTTTTCATACTACTTTTATTTATCATTTTATAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCCTTGTATGAACCCAAACTCTTGTTGCAGTCCAATATTTCTCATGTAAAGAATCATAGAAGAAGTTGCTTTGGAGTTTCTAGACATAAAGTAACAGCATGTTGTACTTCTGTAAAACACAGGAGGCCAATTCCGTATGATGAACTAAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTAGTTCATCACTTCTAGAGGGACAGGCTATTTGACTTTTTTTTTATTTACATGAAGTATTATTGTAACCGTCATTTATGGTTTCAAAATTTCATCATTTAACAAAAACTTGTTGCATTCACCTCTGTCATGGTAAGAAACAAAGAAATGTGTTATTCACGAGTGAGCATAAGGAAATGATATGAGGTTGAAACTTGGAGCGATTGGCTAGTGAGAATAGCAGACTGTTGCCCTGAAGATAAGGGCATAGGAAGTACCATGTTCTTATGTGAATCACAGTCACATCACTTTTGCACAAACTGTTTAGCTCAACCCACATGGGGGTGATGGGAGCATTAGTAGCTTATTTGATGCAGTAGTATCTGTTCACAGCCTCGCAGGCACAACTGAACTTTCTAGTCACTTTGCTATCCAATGAAGTTGGAAGTGTTTCATTATGCTTGCTTACCGCCATGAAGTGACACTGTACTCCCACTATCACAGGTTCCCCCACCACCAAGACGAAAAAGCGGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAGCACCCATAGGCGGAAAGGTAGCCATGACCGGCGAGAAGAAACCGAGAGGAGGACAAGAGCATATGTCAGCAGAGAGGCCGGCAGCTACAGTAAGCGGAGCCCAACCGAAGACGATGGTGATCGTCGTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGAGACTACAGCCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031082