BGIOSGA031105

From RiceWiki
Revision as of 09:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031105| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031105, complete gene.| tag = OsI_320...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031105

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031105, complete gene.

LocusTag

OsI_32070

Ensembl Transcript ID

BGIOSGA031105-TA

Ensembl Protein ID

BGIOSGA031105-PA

Length

3842

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19089413..19093254

Sequence Coding Region

19089413..19089582,19090555..19090791,19091337..19091383,19091684..19091802,19091880..19092040
,19092131..19092240,19092323..19092422,19092453..19092495,19093126..19093254

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19089413..19093254 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19089413..19093254 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTTGCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCTGCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACATGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCAAAGAATAGTGAGAGGATTGGGTCCTTGGGGACCAGGCTTAGTTCAGAGATATACCAGTGCCAGATTTGGCTCACATTCAACAGGTGAATTACTAACAGAACAGGAATCCACATTACTGACAGATTACATTTACCATACTTTGGCTGCCAAAGCTAGTGGAGAGTTGTGCTTAAAACATATATTTTCCTTTGGGGCATTCGCGAGGAAACCTCTTCTGCAAAGGAGTTATGAGCACCCTGGTGATCTTGAGAGCATATGCACAATAGGAGGACATTTTGTGTTCATAGATAATCCTTCGGGGTTCCACTCCGCGGTCTTCCACGCATGCCGCAAGTTTCTATCTGGAGATGGAGAGGAAGGCCTCTCTCTTCCTGAAGGCCTAACATCGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAEGMSTAAAAAEATATAAPAAGSRWGRAWPSALRWIPTSTDRIIAAEKRLLSIVKTGYVQEQVNIGSSPPGSKVRWFRSSSDEPRFINTVTFDSEENAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGPAGFSSETEHSSEWLTKFRATWKGMLVNHLWESNFTPQRIVRGLGPWGPGLVQRYTSARFGSHSTGELLTEQESTLLTDYIYHTLAAKASGELCLKHIFSFGAFARKPLLQRSYEHPGDLESICTIGGHFVFIDNPSGFHSAVFHACRKFLSGDGEEGLSLPEGLTSA</aaseq>

Gene Sequence

<dnaseqindica>1..170#1143..1379#1925..1971#2272..2390#2468..2628#2719..2828#2911..3010#3041..3083#3714..3842#ATGGCGGCGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAGTATCGCTCTCCCTTCGCCCCCAATTTTGGTTCCCCTTTCCTCCGATTAATTCAATTTCATGGACTGTCGACAAGTCCGTGCCCGCTCGTAAAGCCGAGATGCTGACCACCAGGACAGCGAATTGCTTAATCGTGGTGTTACTTTGGGATTGGCATTGGGTTTTGGGTAGGCACTGGATTTGTAATGAGATGTTCGCATTGCAGTCTAGCTCAAAGGAGGGGTATTGGGACTGTACAACGGCTGTTCACCCCCCACACCCCCCCCCCCTCTCGATATGAGTTTTACTGCACACTGGTCGAGCTGTGTGGCAGCTCTGCCTGTTTGTGTCATAATTAAATTAAGCACGTATTGTTAGCTACTGTTTCATTCTCGAGCTGTTTATCTGAATTGTACTACTTGTTAAGCGTAAGTTGTGATGGGAAACAGAATGTTTATTACTTCGCCGCATCACAAAAGGGTGGAGTTTGTTTAGTGGATTTAGATGTATGGAAGAGACTGTTTTAGCTGGTGGCAATCTGCTCCCTCTTTGAGCTCACACACAGTAGCAGTGTAGCACAATGTTAAAGATTTTTCTTTTTCGTACCAATGAACAAATTCACAGGAAAACAAGCGGGTCGTCATATTTGATATACATTGATCTTTCTACATTCTGTAATATTTAAGAATCCGTTTTTGTTCTCAACTACACGGGAGTGCCAATATATTTTTCTGTTTCTGCTCATGTAAGGAGGCATTTATAAACTTGTGACATCCACTCCTGAACAACCTAATGGTCTAATGGTTTGTGTTAGTTACAAGATACAACCTCCTAAGGTTGTATTAATTGTTGGTGTGGTGTTTCTTCCTGGTTTTATGCTCTCAGCTATATTGTTAACAAATATACTTCAGTTCTTTCTTCATTTTGCTCTAGATATATCTGAGGCTCTTTGCAATTTTCTAATTGGTGATGCACTTTTTATATCTCTTTACAGAACTGGCTATGTCCAAGAACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGGTAAGTTTTGAGGGAAATAAAGGGACTCTTTGTCTTGTATTCCTCTATATTGTCACTCAGTATCTCGATTACTTTGCTCATTGTTTCTCAATTATCAAAATAGTCCTATGAACAGCTTGTTGAACTAAAAGGGTACATAGATTTTTTTTGTGCACAAAGTATTTGTGTACCTATACTGACATTAGAGAAAGGAAAAGTGGTGCACGCATTGATCTAAGGGTTCAGTTTTTTTTTTATATATATATCCGAAACATTTCATCACAAGTTGTGGTATTGTTATACGGGAATCGGTTGCCTCTATTTTCTCATCTTCGTTTCATCTATTTTGTGAGAGCTAAATGCAGTACTTCATTCACAGGAAAAATCCTTATTCCTCATCTCCAAGTTAGTAAAAATTAGTGTGATGATACCTAGAAGTGCTTGTCTGATGTATATTGTTGCAAAAAATGTTGTACTCATGTTCAATAATGCTCTATACTGCTTTTCTTAGTTATTTCACATTGTGTGATGTTGCATAAAATTGATTTTTTTTGCTTCCTTTGCAGTTGGGGTGGATCAAGTAGACCTGACTTCACTTGTAAAAGTACTGAAGGTTAGATTCAGATAATCTATTTGTTGTGCATCTTTGAACAATTTTGTCAGAACACTCTTATGTTTCTGATAACCCTTTGTGGCCATTTGCTTTCATTTCCATTTGGTGAGCATGGCATGGGCCCTAGTTTGTGGTGAAAAATATTAGGGCACCATTTTCTGTAAAACTGTAGTTGGCTTTGTAACAAGTACTAAAACAAAACCACATGCATGTTCAGTAATTCTGTTCGGCACATGCTTATATTAAACAGTGAAGTAACCTGTTCCCTTTTTCCTTTCTGTTGGTTCATTTTGTGAGCAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTTGCGGCAAAGTACGCTTTACAGGTATGTTCATAAAAAAATACAGAATTAGCTTCTTCATTGGTGCTCATGATAGTACTGAAACTGAAATCCTATTTCAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCTGCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACATGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCAAAGAATAGTGAGGTAAAGCAACTTCTTGCACTTCATTACTCATATTTCCAAGTTACTCTGTAATTTTATCCTGATATATACTGTATTTGCTTTGCTGAACAGAGGATTGGGTCCTTGGGGACCAGGCTTAGTTCAGAGATATACCAGTGCCAGATTTGGCTCACATTCAACAGGTGAATTACTAACAGAACAGGAATCCACATTACTGACAGGTAATTTTGTTACGCCAATCTAGTACATTCAATGTGTCAAATTACCCATGCAACAGAACCTTACCGTTGCTTTGTTTTGAAGATTACATTTACCATACTTTGGCTGCCAAAGCTAGTGGAGAGTTGTGCTTAAAACATATATTTTCCTTTGGGGCATTCGCGAGGAAACCTCTTCTGCAAAGGTCAGTTTTCTTCGTATTAACTAAATGTAGGAGTTATGAGCACCCTGGTGATCTTGAGAGCATATGCACAATAGTTAGTTGTGTTCACACACTAATTGTGTGATGACCTCCTTGATACTTATTGACACAGTAGTTCAGATAACTTTTTTTTTTATTTTATTCTGAGATTTTGGTCCTCCTCTTTAAGGGTAATCTACAATTCTACAGTTCATACTTTCTCCATGTAGTGACCTCCTTTGTTGATACTTTATTACCTTGAACATACAAGCATGGCTTCGCAAAAAGAAAAGGGAACATCACATTCTCGCATCTGTTCAGTTAGCTTCTTTTTTCCCCCCTTTTTATGCCAGGATATACGATTATTTTTTTTGACGCAACGGATATACGATTATTAGCTGACTCATTTTCCTTCTGTGATTTTTCATGGTGCTCTTGTTTTTAGTCATACCATGCTTCTCACTGTCTCACTGCCCTAAAACTTGTAACAGTGCATCCGATTGGAAAGTGCCAACTACTTTCATATATGGCCAACAAGATTGGATGAATTACCAAGGTGCACAGCAAGCACGGAAAGAAATGAAAGTCCCCTGTGAGATCATCAGAGTTCCACAGGCAAGTTTTTTTTTTCACTGACAATACATATATAACAGAGCTTATACAATAACATTGCTGACATTTGTGAACTCGATGGTTTATTATGCAGGGAGGACATTTTGTGTTCATAGATAATCCTTCGGGGTTCCACTCCGCGGTCTTCCACGCATGCCGCAAGTTTCTATCTGGAGATGGAGAGGAAGGCCTCTCTCTTCCTGAAGGCCTAACATCGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031105