BGIOSGA031112

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Revision as of 09:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031112| Description = cDNA clone:002-111-E01, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA031112, complete gene.| t...")
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Gene Name

BGIOSGA031112

Description

cDNA clone:002-111-E01, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA031112, complete gene.

LocusTag

OSJNOA273B05.4-2

Ensembl Transcript ID

BGIOSGA031112-TA

Ensembl Protein ID

BGIOSGA031112-PA

Length

1632

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19152478..19154109

Sequence Coding Region

19152478..19153600,19153706..19154109

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19152478..19154109 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19152478..19154109 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGTAGACCGCAAGGGGGGTGGCAGCCGGTGAAGCGGCGATTTGGGGAAGAGGGGAGGGGATTTCGTGACCTCACCGAAGGGGAGTTGAGGGAGAGATTGCAGAGGGAAAGGGCGGGAGAAGGGGAGAGAGAGGGAAGCAGGGAGCGAGGTGGTGAACAGCGCGGACCTCGGTGTTTTGGATCACCGGTGGGACGCCGGGAGGGGGGCAGGGGAGCTGGTCGCGGCGACGAGAACTGGCAAGGAGGTCGTCCAGATGTGGCGCGGCAGGGCGGCGGTGGAGATGGTAGCTGGCATGGGGGAAGAGGGGATGGGGGCAGACTTGGAGGAGGAAGAGCAGAAGTTATCAAATTCTTCAAGTGTGCTCAAGAGGGACACCTTCAAATCGACTGCCCGAACCCTCCAATCTGCTATACATGTAAGAAATCTGGTCATATTGCTGCAGAATGTTCAAATTTCCATCGCAAAGGGATTCATCTATGCGGATATGGGATTGCTGGCCAGTGCTTTAATAGCATGACGATTGAGACTGATGGGGGAGAAGATGATCAGATTCCTATCAGGGGGATATTGACTGTAATTAGTGGGGAAGGTTCTGTGGATCAGATAGAATGGAAGCTGAAGTACAAATTGTTTAAGGGAGTTGTGTGGGACTGGAAGGTGACTGCAATCAGTGAGAAAACTTTCCTGATATCTTTCCCTTCAAAGGAGGCTAGGAGAGAGCTGACAAAATTTGATGGTTTTGATTTAAGTTCCTCTATCAAAGCTAAGGTGGAGGAGACCAGCAGGACAGAGGAATCTTTTGCTGAGCTAAGAGAAGTTTGGGTCAAAGCTTATAGGGTGCCTAGAATTGCTAGAAAGGAGAAGGAGTTGAAAGATCTATCATATTTGGTTGGGGAGCCAATTGAGGTTGATGAGACAAGTTTGAGAGGTTTGGGACCGGTTAGGGTCAAGGTGGCAGTATGTTCACCGGAGGAAATTCAGGGAAGCACCTCTGTGTTCATAAACAGGGTGGGATATAGAATCAGATGGGAGACTGAAGAAGGAAACATGGAGCAACTGAATCCTTCTCCAAAGAAGAAAAAAGAGGAAAAACAAAAGGATGTTGACAAGGATAAAGGGTCAAAACAACAGCAGTTGCTGGCCCTGACAATGAACCAAGTTTCAGAGAAGAATGGGGATTATAAGAATCCTGAGACAATACTAAAATCTGGAAGAGATGCAGGCAAGGAGATGGTAGTATGGGAGTCACAAATGGAGCAAAAGGTAAACACAAAAGGAGTGCCAGCTGATCAGTCTCTAGATATGCTCACTCAGATGGATGTGGAAAAAATTGACAGTCTGTCTCAGAATCTGAATGACTCCTATGAGGCTGAAGATGAAGTGGACTATGACTACTCTGATTTAGAGGTGCAGGAGGGGATGATCTCAACTCAGAAACTGGAAGCTTACTTTGAAGAAGAAGGCAAAGAGAAAGATAAGCCAAACAGGGGAGAAATCTGCTTGGGGAAGAGGATAACATGA</cdnaseq>

Protein Sequence

<aaseq>MDRRPQGGWQPVKRRFGEEGRGFRDLTEGELRERLQRERAGEGEREGSRERGGEQRGPRCFGSPVGRREGGRGAGRGDENWQGGRPDVARQGGGGDGSWHGGRGDGGRLGGGRAEVIKFFKCAQEGHLQIDCPNPPICYTCKKSGHIAAECSNFHRKGIHLCGYGIAGQCFNSMTIETDGGEDDQIPIRGILTVISGEGSVDQIEWKLKYKLFKGVVWDWKVTAISEKTFLISFPSKEARRELTKFDGFDLSSSIKAKVEETSRTEESFAELREVWVKAYRVPRIARKEKELKDLSYLVGEPIEVDETSLRGLGPVRVKVAVCSPEEIQGSTSVFINRVGYRIRWETEEGNMEQLNPSPKKKKEEKQKDVDKDKGSKQQQLLALTMNQVSEKNGDYKNPETILKSGRDAGKEMVVWESQMEQKVNTKGVPADQSLDMLTQMDVEKIDSLSQNLNDSYEAEDEVDYDYSDLEVQEGMISTQKLEAYFEEEGKEKDKPNRGEICLGKRIT</aaseq>

Gene Sequence

<dnaseqindica>1..1123#1229..1632#ATGGATCGTAGACCGCAAGGGGGGTGGCAGCCGGTGAAGCGGCGATTTGGGGAAGAGGGGAGGGGATTTCGTGACCTCACCGAAGGGGAGTTGAGGGAGAGATTGCAGAGGGAAAGGGCGGGAGAAGGGGAGAGAGAGGGAAGCAGGGAGCGAGGTGGTGAACAGCGCGGACCTCGGTGTTTTGGATCACCGGTGGGACGCCGGGAGGGGGGCAGGGGAGCTGGTCGCGGCGACGAGAACTGGCAAGGAGGTCGTCCAGATGTGGCGCGGCAGGGCGGCGGTGGAGATGGTAGCTGGCATGGGGGAAGAGGGGATGGGGGCAGACTTGGAGGAGGAAGAGCAGAAGTTATCAAATTCTTCAAGTGTGCTCAAGAGGGACACCTTCAAATCGACTGCCCGAACCCTCCAATCTGCTATACATGTAAGAAATCTGGTCATATTGCTGCAGAATGTTCAAATTTCCATCGCAAAGGGATTCATCTATGCGGATATGGGATTGCTGGCCAGTGCTTTAATAGCATGACGATTGAGACTGATGGGGGAGAAGATGATCAGATTCCTATCAGGGGGATATTGACTGTAATTAGTGGGGAAGGTTCTGTGGATCAGATAGAATGGAAGCTGAAGTACAAATTGTTTAAGGGAGTTGTGTGGGACTGGAAGGTGACTGCAATCAGTGAGAAAACTTTCCTGATATCTTTCCCTTCAAAGGAGGCTAGGAGAGAGCTGACAAAATTTGATGGTTTTGATTTAAGTTCCTCTATCAAAGCTAAGGTGGAGGAGACCAGCAGGACAGAGGAATCTTTTGCTGAGCTAAGAGAAGTTTGGGTCAAAGCTTATAGGGTGCCTAGAATTGCTAGAAAGGAGAAGGAGTTGAAAGATCTATCATATTTGGTTGGGGAGCCAATTGAGGTTGATGAGACAAGTTTGAGAGGTTTGGGACCGGTTAGGGTCAAGGTGGCAGTATGTTCACCGGAGGAAATTCAGGGAAGCACCTCTGTGTTCATAAACAGGGTGGGATATAGAATCAGATGGGAGACTGAAGAAGGAAACATGGAGCAACTGAATCCTTCTCCAAAGAAGAAAAAAGAGGAAAAACAAAAGGATGTTGACAAGGATAAAGGTGATGACAAGGGTCCCTCCAAAAAAAAGGGAGAGTCATCGAAGGATGGAGAAGCAAAAGGGAGCAGAGGGCCTTAACCTCATTCAGCTCCACCAAAACTGCCAGGGTCAAAACAACAGCAGTTGCTGGCCCTGACAATGAACCAAGTTTCAGAGAAGAATGGGGATTATAAGAATCCTGAGACAATACTAAAATCTGGAAGAGATGCAGGCAAGGAGATGGTAGTATGGGAGTCACAAATGGAGCAAAAGGTAAACACAAAAGGAGTGCCAGCTGATCAGTCTCTAGATATGCTCACTCAGATGGATGTGGAAAAAATTGACAGTCTGTCTCAGAATCTGAATGACTCCTATGAGGCTGAAGATGAAGTGGACTATGACTACTCTGATTTAGAGGTGCAGGAGGGGATGATCTCAACTCAGAAACTGGAAGCTTACTTTGAAGAAGAAGGCAAAGAGAAAGATAAGCCAAACAGGGGAGAAATCTGCTTGGGGAAGAGGATAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031112