BGIOSGA031166

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031166| Description = cDNA, clone: J075134I16, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA031166, complete gene.| ...")
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Gene Name

BGIOSGA031166

Description

cDNA, clone: J075134I16, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA031166, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA031166-TA

Ensembl Protein ID

BGIOSGA031166-PA

Length

2030

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19944533..19946562

Sequence Coding Region

19944533..19944705,19944786..19945200,19946401..19946562

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19944533..19946562 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19944533..19946562 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCGCTACGACCGCGCCATCACCGTCTTCTCCCCCGACGGCCACCTCTTCCAGGTCGAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACGCCGCCGTCGGCGTCCGCGGCTCCGACACCGTCGTCCTCGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCAGGTCGGTGCGCAAGATCGCTAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCAAGGCGGACGCCCGCGTGCTCATCAACCGCGCGCGGGTCGAGTGCCAGAGCCACCGCCTCACCGTCGAGGACGCCGTCACCGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGAAGTACACCCAGAGCGGCGGGGTCCGCCCCTTCGGACTCTCCACCCTCATCGTCGGATTCGACCCTTACACCGACAAGCCCGCGCTGTACCAGACCGATCCCTCCGGCACCTTCTCCGCGTGGAAGGCCAACGCCACGGGGAGGAACTCCAACTCCATGAGGGAGTTCTTGGAGAAGAATTACAAGGAGACCTCTGGCAAAGAGACCATCAAGCTCGCAATCCGTGCTCTCCTTGAGGTTGTTGAGAGTGGCGGAAAGAACATCGAGATTGCAGTGATGACACAGAAGGATGGTCTTCGCCAACTCGAGGAGGCTGAAATCGACGAATATGTTGCTGAGATCGAGGCAGAGAAAGCTGCAGCTGAGGCTGCAAAGAAGGGTGCCCCTAAGGAGACCTAA</cdnaseq>

Protein Sequence

<aaseq>MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEAAKKGAPKET</aaseq>

Gene Sequence

<dnaseqindica>1..173#254..668#1869..2030#ATGGCCCGCTACGACCGCGCCATCACCGTCTTCTCCCCCGACGGCCACCTCTTCCAGGTCGAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACGCCGCCGTCGGCGTCCGCGGCTCCGACACCGTCGTCCTCGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCAGGTACCCATCACCTCCTCGCGACCTCTCTCCCCATACACCCCCATAGATCTCATCTCGCCGGTGGGGGATTCGATTCGCAGGTCGGTGCGCAAGATCGCTAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCAAGGCGGACGCCCGCGTGCTCATCAACCGCGCGCGGGTCGAGTGCCAGAGCCACCGCCTCACCGTCGAGGACGCCGTCACCGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGAAGTACACCCAGAGCGGCGGGGTCCGCCCCTTCGGACTCTCCACCCTCATCGTCGGATTCGACCCTTACACCGACAAGCCCGCGCTGTACCAGACCGATCCCTCCGGCACCTTCTCCGCGTGGAAGGCCAACGCCACGGGGAGGAACTCCAACTCCATGAGGGAGTTCTTGGAGAAGAATTACAAGGAGACCTCTGGCAAAGAGACCATCAAGCTCGCAATCCGTGCTCTCCTTGAGGTATTTTTTGTTTCTCTTGCTTCCTCAGCAGTTTATTTGATGTCAATTGTAGACTACAAATAGTGCTTGACATGATTTAGGAATAACCAGAGGTAGAACGATATAAATAACAGACATATGAAATGTACTCCTGATTTGACCTTGCTGGCTTGCTCATCTATCAACAGTGTCATGGTGAAATCAATTATGTTTGAAGAAATTAATTAATTGTAGAAGTTGTAAGAGTAATGTTTTCCCAGTGGTAATTTGTAATGCTGAATTGTGTGGTTCATTAAGATAAATGTATTTGAAGTGCCCCTGGGAATATTGAAATCTAGACATTGGGTGCAATCTTTTATATACCATACCATAACCCATCCATGGAGATTTTACTTTTGTATGTCTTGCCACTGTATGTTTGGAGTATTCTGAACCCAAATTGACAAAGCCTAGTGTGCTTTGTCAATCTACACAACTGAAGTTCCTTAAACCTTGTTGGTAAAAATCTCTGGTACACGTGAATCTTCTAATAACACACTTGTAAAATTCTTCTATAGAACGAGTGTTATGGATAACAACCATTTTAATTAAGAAAACCACAAATTATAGGGAGTTTTTATTGAATCCCGTCTTCTGAAAGGTCTGTGACTTTAGGCCTATTGTGCAATTATTAGATGATCCTTCACATCCTCTGGCGTTCTGCTCTGATTCCAAGAATGTACATAAGCATGATACCAGATTTAACAAATTGAGGGATTTCAGGACCTAAATTCTTATATTTCAGGACCTAAATTCAGATTTAACAAATTGAGGGATTTCAGGACCTAAATTCTTATAAATTTCAGAAGCCTGATGCTTTAATTAATTTTGTCACATGCATCATATTTGTTTCCAGTATAGGTTGCATCCGAGTGTTCAGGCTCTCTATTGTCATATCCTCTCATGGTATTTGTAGACTATGACTAAAAACTTTGTAGTAAGATGGTTGAGTGTATGCCTTATGCAGAGGCTATCTAGAAAAAAATGCCATCTCATGGTTAAGTGTGACCATGTGAACATGACTTCTCATGGTTAAGTGTGACCATGTGAACATGACTTATTTTTCACTACTTGAACTCATTTGTCTTTGGCCTATGCCACTACGCTAGTATGGTATTTGGTTGCATTTATTTAGATTGTTTTTGTCAAGCAATTACTGACGAACTGACATAAATTGCACAGGTTGTTGAGAGTGGCGGAAAGAACATCGAGATTGCAGTGATGACACAGAAGGATGGTCTTCGCCAACTCGAGGAGGCTGAAATCGACGAATATGTTGCTGAGATCGAGGCAGAGAAAGCTGCAGCTGAGGCTGCAAAGAAGGGTGCCCCTAAGGAGACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031166