Os10g0565100

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Revision as of 08:48, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0565100| Description = Similar to Metacaspase 1| Version = NM_001071949.2 GI:297610940 GeneID:4349416| Length = 1720 bp| Definition = Oryz...")
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Gene Name

Os10g0565100

Description

Similar to Metacaspase 1

Version

NM_001071949.2 GI:297610940 GeneID:4349416

Length

1720 bp

Definition

Oryza sativa Japonica Group Os10g0565100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22777447..22779166

Sequence Coding Region

22777449..22777504,22778149..22778269,22778486..22778702,22778867..22778958

Expression

GEO Profiles:Os10g0565100

Genome Context

<gbrowseImage1> name=NC_008403:22777447..22779166 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22777447..22779166 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgcttgtcacagtgggactgcacttgatttgcctttcctctgcagaatgaacaggagtgggcaatatgtatgggaagatcatcgacctcgatctggtgtctggaagggcactagtggcggcgagtgtatttcatttagtggttgtgacgatgatcagacatctgcagatacttcagctttgtcaaagatcacttcaactggcgctatgacattttgctttatccaagcaattgagcgtgggcagggcaccacctatgggagtatcctgacctccatgcgttcgacaatacgcagtacaggtgattcaatgggcagcggaggtggtgctgtaacatcgctaatcacaatgcttcttacaggaggcagcgttagtagtggcggcttgaagcagggatccacagctaactgcaaacgagccattcgatgtgtatgcgaagcccttttctctatgacacgatcctggtattctccaccgcgtctatga</cdnaseq>

Protein Sequence

<aaseq>DACHSGTALDLPFLCRMNRSGQYVWEDHRPRSGVWKGTSGGECI SFSGCDDDQTSADTSALSKITSTGAMTFCFIQAIERGQGTTYGSILTSMRSTIRSTGD SMGSGGGAVTSLITMLLTGGSVSSGGLKQGSTANCKRAIRCVCEALFSMTRSWYSPPR L</aaseq>

Gene Sequence

<dnaseqindica>3..58#703..823#1040..1256#1421..1512#tagatgcttgtcacagtgggactgcacttgatttgcctttcctctgcagaatgaacaggttcgcttatcttgtgcaagctcttttttttttggcacttgaatgataagtacatggacttaacctaatggcaatcttattatcctatcttcactacaaactatgtttgcaagaaagatgctatttacttctgaaccaatttgatttgaatgccatgtttgtctgattatgtttcagctgatgatgatatgattttggagcttgctcaaatattctattgaaatgcagtttgaggacagcattcaattattttttttgtctcatgatgattatattctgtcatcctgctcaaatatttttactggaatgtaatttgagggtagagccagtgaactatgtttcttagtcaattatgtcaatacaagtagttaccctcttgggactgtcatttgttggaaacagttttggtgtggtactgttcaccatccgtttattttcacaacttactgctaatttgcccatagtatgtccatcaaaatgttgtttatcctaggacaggaatgtgctgtttagagactatgctgttttattcagttggttttgttttggattccttggttgtagtgtttactttacaaacatagatctgtagatcttatgatggaaatatgttcagctaatatccctggtcttctttggtacaggagtgggcaatatgtatgggaagatcatcgacctcgatctggtgtctggaagggcactagtggcggcgagtgtatttcatttagtggttgtgacgatgatcagacatctgcagatacttcagtaaatttttgaattcattccttctctgttagcatcctaggctgtcattccttattctcttcgaagttaatatatgcttaaaagatagctttggcaaggactctgattgcagatcatgcctgttctgttactgttctattggtcagttgtgttctattctgtttaacccaatttataggtattaacatttgattcatttgcacttgttccaatcaggctttgtcaaagatcacttcaactggcgctatgacattttgctttatccaagcaattgagcgtgggcagggcaccacctatgggagtatcctgacctccatgcgttcgacaatacgcagtacaggtgattcaatgggcagcggaggtggtgctgtaacatcgctaatcacaatgcttcttacaggaggcagcgttagtagtggcggcttgaagcaggtaaattctggagtttgacatattcctctctatctagtgattatttaaatcctatttccgtgggtacaatacaaaaacacacagaacatgttcttttggttgtatacaatttccattcccttttcagattgtcaacaatactaactgcttttctctaatctgcaggatccacagctaactgcaaacgagccattcgatgtgtatgcgaagcccttttctctatgacacgatcctggtattctccaccgcgtctatgattatatcactagtccccgtataaattatcatgatgtaaatttcactgttgaaagggctccatttcataaatagagctaacatgttgcatgtattgttgctcattacattgttcacgccctttggaatgtgatttgtaccttggtcacattgttccttgatcaagaccatattatgctcagtgcaatatgcacgggttaatgagattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0565100, RefSeq:Os10g0565100