BGIOSGA031196

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031196| Description = BGIOSGA031196| Definition = Oryza sativa Indica Group BGIOSGA031196, complete gene.| tag = | tid = BGIOSGA031196-TA|...")
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Gene Name

BGIOSGA031196

Description

BGIOSGA031196

Definition

Oryza sativa Indica Group BGIOSGA031196, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA031196-TA

Ensembl Protein ID

BGIOSGA031196-PA

Length

1104

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20356799..20357902

Sequence Coding Region

20356799..20356939,20357076..20357173,20357294..20357324,20357432..20357902

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20356799..20357902 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20356799..20357902 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGAGGCGGCGGCGGCGGCGGACATGAACGGCGGCGTGCATCAGTCCCGGTTCCGGCGGGTTTGCGTGTTCTGCGGGAGCAGCTCCGGCAAGCGGCGCAGCTACCGCGACGCCGCCGTCGAGCTCGGCAAGGAGCTGGTGGCGAGGAAGGTGGATTTGGTGTACGGAGGAGGCAGCCTGGGTCTCATGGGGGAGGTCGCCGAGGCCGTGCACAACGGCGGCGGCCACGTCATTGGCGTCATACCTACCACTCTGATGGGCAAGGAGGTAACGGGAGAGACGGTAGGGGAGGTGCGGGAGGTGGGGAGCATGCACGAGAGGAAGGCGGAGATGGCGAGGAGGTCGGACGCGTTCGTGGCGCTGCCGGGAGGGTACGGGACGCTGGAGGAGGTGGTGGAGGTGATCGCGTGGGCGCAGCTGGGCATCCACGCCAAGCCCGTCGGCCTCCTCAACGTCGACGGCTACTACGACTTCCTCCTCGCCTTCGTCGACAAGGCCGTCGCCGACGGCTTCATCCCCCCTTCCCACCGCCACCTCTTCGTCTCCGCCCCCGACGCCCCCTCCCTCGTCCACAAGCTCGAGGTATGTGTGTGTGTGTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACATATCAGGGATTTAGGGGTGTGAGCAATGCATATCACAATTCCAAGGCTGCATTCAGAGCACCAATTTAG</cdnaseq>

Protein Sequence

<aaseq>MEEAAAAADMNGGVHQSRFRRVCVFCGSSSGKRRSYRDAAVELGKELVARKVDLVYGGGSLGLMGEVAEAVHNGGGHVIGVIPTTLMGKEVTGETVGEVREVGSMHERKAEMARRSDAFVALPGGYGTLEEVVEVIAWAQLGIHAKPVGLLNVDGYYDFLLAFVDKAVADGFIPPSHRHLFVSAPDAPSLVHKLEVCVCVSLSLSLXXXXXXXXXXXXXXXXXTYQGFRGVSNAYHNSKAAFRAPI</aaseq>

Gene Sequence

<dnaseqindica>1..141#278..375#496..526#634..1104#ATGGAAGAGGCGGCGGCGGCGGCGGACATGAACGGCGGCGTGCATCAGTCCCGGTTCCGGCGGGTTTGCGTGTTCTGCGGGAGCAGCTCCGGCAAGCGGCGCAGCTACCGCGACGCCGCCGTCGAGCTCGGCAAGGAGCTGGTATATATGCGTGATTAATTAATTTCTCTCCATGTTGATCATGATTAATTCATGCATTCGATCGAGCTCGATCAATCAGCTCTAGTTAACTAGCTAATTATTAATTAACTGATTAAGACGATGAATTAACTGGTAGGTGGCGAGGAAGGTGGATTTGGTGTACGGAGGAGGCAGCCTGGGTCTCATGGGGGAGGTCGCCGAGGCCGTGCACAACGGCGGCGGCCACGTCATTGGGTCCGTACACATAGACACCCCCTCTCTTCGTTCTCCTCGTGTTGCCTAGCTAGCTCGTACTCTGTCTGTTCAATGATCAATCCGGCAATGTTTAATCAATTTCTTTCTTGATGCATGCAGCGTCATACCTACCACTCTGATGGGCAAGGAGGTAAAGAATTGATTTCAACAGCTCATTAATTTCAGTCATATATATTGACTAGCTAATAATTAATTAAGGTAATCAAATGGTAGAAATTAATGATGAGGTACGTGTAGGTAACGGGAGAGACGGTAGGGGAGGTGCGGGAGGTGGGGAGCATGCACGAGAGGAAGGCGGAGATGGCGAGGAGGTCGGACGCGTTCGTGGCGCTGCCGGGAGGGTACGGGACGCTGGAGGAGGTGGTGGAGGTGATCGCGTGGGCGCAGCTGGGCATCCACGCCAAGCCCGTCGGCCTCCTCAACGTCGACGGCTACTACGACTTCCTCCTCGCCTTCGTCGACAAGGCCGTCGCCGACGGCTTCATCCCCCCTTCCCACCGCCACCTCTTCGTCTCCGCCCCCGACGCCCCCTCCCTCGTCCACAAGCTCGAGGTATGTGTGTGTGTGTCTCTCTCTCTCTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACATATCAGGGATTTAGGGGTGTGAGCAATGCATATCACAATTCCAAGGCTGCATTCAGAGCACCAATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031196