BGIOSGA031206

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031206| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031206, complete gene.| tag = OS09G05...")
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Gene Name

BGIOSGA031206

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031206, complete gene.

LocusTag

OS09G0547300

Ensembl Transcript ID

BGIOSGA031206-TA

Ensembl Protein ID

BGIOSGA031206-PA

Length

4533

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20403492..20408024

Sequence Coding Region

20403492..20405088,20405171..20405316,20405909..20406132,20407265..20408024

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20403492..20408024 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20403492..20408024 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGAGTACGCGGTGCGGCACTGCAGGGAGAGGTCGGAGCTGCTCGCCCTCGCCATCCGCCACCGCTACGCGCTCGCCGACACCCACCGCGCCTACGCCGAATCCCTCGCCGCCGTCGGCGCCGTGCTCCACGACTTCCTCCGCGGCGTCCAGTCGCTGCCCCCGCCGCCGCTCGAGCCCACGCTCCGCCTTCCCGCCCACCGCAAGGGCGACAACCTCCCCACCGCCTCCCCCGTCCCGGCCAACCCCGCCATCGCCTCCTCCTCCGCCGCCCAGCCGCTGCCGCCCGTCGCCAAGCAGGTACGAATCGCCGCCGCCCCCGATGACGGCGGCGGCGGCCACATCCACTTCTCGGACGACGACTCCGATTCCGAGGGCGGCGGGCACATCAAGTTCCACTCCGACGACGAGGGCGACGCGCCCGCTCACCGCCGCCCAGAGATCGTCCGCTCCGCCGCGCCGCCGGTGGCTCCGCCGCCGCAGATGGGGCCACCACCACCGTATGGCTCCGGATATGCTCCTCCTCCGCCTTATGGTTCGGGATACGGGTATGGATACGGCCCCGCCCCCGATTACGGCGGCGGCATGGCCGTTGCCAACGGCGGCTATGACCCAGGGTATGGTGGTATGGGCGGAGCCAGTGGCGGCGGCGGCTATGCGCCTGGATATGGAGGCATGGGAGTTGGGGATGGCGGCAGCGATGGCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCAGCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCACCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACGCGGGTATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACGGTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCGGGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGAACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACACTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATGAGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACAGTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGCCCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCCATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATGTCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGCTGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGCTTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGTGTCTGCGATGATGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGATGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTCTGGAGGAAGTCAAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATTGGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATGAACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCACCTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAGTAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGTCAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGGAAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MEEEYAVRHCRERSELLALAIRHRYALADTHRAYAESLAAVGAVLHDFLRGVQSLPPPPLEPTLRLPAHRKGDNLPTASPVPANPAIASSSAAQPLPPVAKQVRIAAAPDDGGGGHIHFSDDDSDSEGGGHIKFHSDDEGDAPAHRRPEIVRSAAPPVAPPPQMGPPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGGYDPGYGGMGGASGGGGYAPGYGGMGVGDGGSDGGYEPAYGGMGSYGQSFFNISYARSQPPPPSVSYEHRLQATDARVHYYAGEGNPQAPPRGYGGGYGYPPQGSSSYNQYAYGGYYGGASPPPPADIPSTSRGEVTPPAPPSPPRVSTWDFLNPFETYESYYEQPTAAQASYTPSRSSKDVREEEGIPDLEDEDMEVVKEAYGDEKHAANGYSGKGKMAKEEGGRSSTGDELPHESKLSEASSSGSNQEHDVHVVEKSVVGEQVQRSEPRQHVAGLPPIGSEKTYFDDAEVVLEIRTQFERASKSAIEVSKMLEVGKMPYYPKSSGFKVSAMMICGIPTMEEEFLRFEEDKAMGCGNLSSTLQKLYMWEKKLLEEVKAEEKMRALYDRQREELKILDEKGAEADKLEATERSIRKLSTKISIAIQVVNTISDKISKLRDEELWPQTCELIQGLMRMWSTMLECHQIQLHAISHAKNIDSMINGAKFGEAHMDLIKRLELQHLDWIASFASWVNAQKSYVGTLNDWLRKGVTYEPEVTDDGVPPFSPGRLGAPPIFVIYNNWAVGVGRISEKEVVEAMQAFASNVLGLWERHRSEQRQGLMANKGMDKDLRVMERDEQSMRKALEAQNKKLVLISNQSGVSLSAQAQALQDGGSHGDTGSLQLSLKNIFEAMENFTANSANTYKDLHLRAEEEKARVAQESCRVS</aaseq>

Gene Sequence

<dnaseqindica>1..1597#1680..1825#2418..2641#3774..4533#ATGGAGGAGGAGTACGCGGTGCGGCACTGCAGGGAGAGGTCGGAGCTGCTCGCCCTCGCCATCCGCCACCGCTACGCGCTCGCCGACACCCACCGCGCCTACGCCGAATCCCTCGCCGCCGTCGGCGCCGTGCTCCACGACTTCCTCCGCGGCGTCCAGTCGCTGCCCCCGCCGCCGCTCGAGCCCACGCTCCGCCTTCCCGCCCACCGCAAGGGCGACAACCTCCCCACCGCCTCCCCCGTCCCGGCCAACCCCGCCATCGCCTCCTCCTCCGCCGCCCAGCCGCTGCCGCCCGTCGCCAAGCAGGTACGAATCGCCGCCGCCCCCGATGACGGCGGCGGCGGCCACATCCACTTCTCGGACGACGACTCCGATTCCGAGGGCGGCGGGCACATCAAGTTCCACTCCGACGACGAGGGCGACGCGCCCGCTCACCGCCGCCCAGAGATCGTCCGCTCCGCCGCGCCGCCGGTGGCTCCGCCGCCGCAGATGGGGCCACCACCACCGTATGGCTCCGGATATGCTCCTCCTCCGCCTTATGGTTCGGGATACGGGTATGGATACGGCCCCGCCCCCGATTACGGCGGCGGCATGGCCGTTGCCAACGGCGGCTATGACCCAGGGTATGGTGGTATGGGCGGAGCCAGTGGCGGCGGCGGCTATGCGCCTGGATATGGAGGCATGGGAGTTGGGGATGGCGGCAGCGATGGCGGCTATGAGCCAGCCTATGGCGGCATGGGCAGCTATGGCCAAAGCTTCTTCAACATCAGCTATGCGCGCAGCCAGCCGCCTCCGCCGTCCGTCTCATACGAGCACCGGCTGCAGGCCACCGATGCCAGGGTCCACTACTACGCCGGAGAAGGCAACCCTCAAGCACCCCCACGCGGGTATGGCGGTGGGTATGGTTATCCGCCGCAGGGCTCGAGCTCTTACAACCAGTATGCGTACGGTGGTTACTATGGTGGTGCTTCTCCTCCGCCTCCGGCCGATATACCTTCTACCTCCCGCGGGGAGGTTACGCCACCGGCACCTCCATCTCCGCCGAGGGTGTCTACTTGGGACTTCCTGAACCCATTTGAAACCTATGAGAGCTACTATGAGCAGCCAACTGCTGCTCAAGCGTCATACACTCCCAGCAGAAGTTCCAAGGATGTGCGTGAGGAGGAAGGCATACCAGATTTGGAGGATGAGGATATGGAGGTGGTTAAGGAAGCTTATGGTGATGAGAAGCACGCCGCCAATGGGTACAGTGGCAAGGGGAAGATGGCAAAAGAGGAAGGTGGTAGGAGCAGCACCGGGGATGAACTGCCCCATGAATCCAAGTTATCGGAAGCGAGCAGTAGCGGGAGCAACCAGGAGCATGATGTCCATGTAGTGGAGAAGAGTGTTGTGGGAGAACAGGTGCAGCGGTCAGAGCCTCGTCAGCATGTCGCAGGCCTGCCGCCCATAGGATCGGAGAAGACGTACTTTGATGATGCTGAGGTGGTGCTGGAGATCAGGACTCAATTCGAGCGTGCCTCAAAATCTGCCATTGAGGTGTCCAAGATGCTTGAGGTTGGGAAGATGCCTTACTACCCGAAGAGTTCAGGTTTCAAAGGTTCGTACAGTCAGATCTCATATGCTATTCTTTTGCAGTTTTCAAATATGAGTTCTAATTTGACCCCCAATTGCCAATATAGTGTCTGCGATGATGATTTGCGGGATACCAACAATGGAGGAAGAGTTCCTGCGGTTTGAAGAAGACAAGGCGATGGGGTGTGGCAATCTTTCCTCAACACTGCAGAAACTGTACATGTGGGAAAAAAAGCTTCTGGAGGAAGTCAAGGTATGTAATATATGCTTGGAATTTGTTGGGAATGATTTGATTCATGTGATTCTTTTGAGCATGTTATCTTTCCTTTTTTTACACCTGCATGTTGGTAGATCCTGATTGGTAGTGCAGAATCCAGTCCAGTGAATATCTGGATTTGTCCATTCTCTATGATATTGGCTGATCCTTTTTATAAATTCCAGCTTCTTTTAAAGGAAGAAACGTTGTTTGGTTGGTGACTTTTCAATGTTTTAGTGGATCAAGTAGCTATCAGGAAAAACTGCATTTCATTTCTGGATGGATATGTCTACTCTAATACTTAGTTATAAGTTTTTCTATTTGTTATAGGGAAATATTGGCCTTCATTCGAATGACTGCTGCCACCATGTTTTCCCTCCACAAGAATCGATCTCTTCCGTTTTCATACCTTATTGGCTTTATGCTTTTGGCTTCTAGTTTGTTGTTCTTACTCCTAGGAATTTAGTATGGCATGTAAGACAATGCTTTTATTTCGTCATCCTTATGGGTCCACGATTTAAATGCTATGCATTTTTCCATTTATCCAATTTTAGATTGGGCTTACTCAAGTATTGTTTGTGTATTACAGGCTGAGGAGAAGATGCGGGCGTTGTATGACAGGCAACGTGAGGAGCTGAAAATATTAGATGAGAAAGGTGCAGAAGCTGATAAGCTTGAGGCTACTGAAAGATCCATCAGGAAGCTATCAACAAAGATAAGCATAGCAATTCAGGTTGTCAACACTATCTCAGACAAGATAAGTAAGCTGAGGGATGAAGAGTTATGGCCGCAAACATGTGAGCTCATCCAAGGGTATGCAGTTATCCCTTATGGCAACTTTGACTTTCATATGTTAGCAGCACATAGTAAAGTAATATCTGCTGTCTGTATTCTGCTTTTCTTGGCACATGATTTTCTAAACCTATTATCTACAGTTATTAGCATGTTTAGCTTCTGCATAGCTAATTAACTTCTATCTGTGGTTTTTTTTTTCTAAAATATTGTTTAGTTCCATTGACTGTAATTTTAAGGATGAGTTGTGTGTAGTGGAAAAATAAGTTGCCCAACTGTCCAAGGTTTTGTTTGGTGTTTTTTTTTTTGGCAGAACGATCTTTAGTGACAGGAATTAGTTAATTCTGTCAAGTATTCTCATCAGACCTTCGGTATGGTGAATTTTCTGAGAAACTCTAGTTGCAGAAAGCTCATGTCTAGGGGTGCATTGCATTCTTCAGGTAGCAGCCATGGCCTATAGACATAGATATAAATAGTGTGAACTGGTATAGAACCTATCACTTTACATGTAGTTTTCTTATGTAGTCTTAATTTTTGTACTTAGCCAATTTAAAATCCTAAAACACACGGCTGGATTTGATGCGTATGGTCATGTAGCCATGTAGCCCCTTTGTGCCGCAACATAAGTTTGTCGTGAAACTTGTATTTTCACCTTTGTGCTGCAACATAAGTTTGTCGTGAAATTTGTATTTTCACAAGGTAAGCCCGTCGAGGATTATACATTTCATATGCATACCCCACCTGTAAAATTGGAAGAGTAGTCATTTATGCTGCCATTTCATAGGGGCGTTTGATGGTCCAATGCTATTCATTTTTTATCACTAAATTTAGCACCTTCATAGAGGCGTGTCATGGGCTTGGACCATTTTTTGGATGGCTGGATTGCCAGGATAATTACCTGCCTGTGGTTATGTGCCAAAAGGATTGGCTGCCATTTGCTTAGTCTTTCTGTGGTTGTGTTTCTACATACTGTTCTATCCTATTATTAGCAGCCAGCCCAATGAAATTTGTATATACATTGGGTTGTGTGCTGTTAAGATACTAAGTTAGCACCTATGCATCTTTGTTTGCACCCAGAATTTTCTGACTGTCTGAGTGCTGGCTTTGATACTTGCTATGGATCATTTCTCAACTAAAAAATAATAATTTTCAGGTTGATGCGGATGTGGAGCACTATGTTAGAATGCCATCAGATCCAATTGCATGCCATATCCCATGCTAAAAACATAGATTCCATGATAAACGGTGCAAAGTTTGGTGAAGCTCACATGGACTTGATCAAGCGCCTAGAGCTTCAGCATTTGGATTGGATAGCCTCTTTTGCCTCATGGGTGAATGCTCAAAAAAGCTACGTTGGTACTTTAAATGACTGGTTGAGGAAAGGAGTCACATATGAACCTGAGGTAACTGATGATGGTGTGCCTCCTTTTTCTCCTGGACGGCTAGGAGCGCCACCTATTTTTGTCATATATAACAATTGGGCAGTTGGTGTGGGGAGGATATCTGAGAAGGAAGTAGTTGAGGCAATGCAGGCCTTTGCATCTAATGTTCTTGGCCTCTGGGAAAGGCACAGGTCAGAGCAAAGACAAGGTCTTATGGCTAATAAAGGTATGGACAAGGACCTTAGGGTGATGGAAAGGGATGAACAGTCGATGCGCAAGGCTCTGGAAGCACAAAATAAGAAGCTGGTGCTCATTTCTAATCAGAGCGGTGTATCCTTATCAGCACAAGCACAGGCCTTACAAGATGGAGGTTCCCATGGTGATACTGGTAGTTTGCAACTAAGTCTGAAGAATATTTTTGAAGCAATGGAGAACTTCACCGCCAACTCTGCAAACACCTACAAGGATCTCCACCTGCGTGCTGAAGAAGAGAAAGCTCGCGTTGCCCAAGAGAGTTGCAGAGTTTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031206