BGIOSGA031212

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031212| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031212, complete gene.| tag = OsI_322...")
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Gene Name

BGIOSGA031212

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031212, complete gene.

LocusTag

OsI_32278

Ensembl Transcript ID

BGIOSGA031212-TA

Ensembl Protein ID

BGIOSGA031212-PA

Length

3797

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20440357..20444153

Sequence Coding Region

20440357..20440527,20440777..20440818,20440954..20441144,20441618..20441678,20443735..20443974
,20444076..20444153

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20440357..20444153 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20440357..20444153 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTACCTCTTGGTATCTGTACCTCGTGGTACCTTCTCAAAGATTATGAAGATGAGGACTTAAGCGAAGATGAAGATGAGGACTTAAGCGATGGGCATCATATTGAGTATAATATCCTTGGTGTCCTTTCACATGCTAGAAGCCTAAAATTGGTAGCTCCGCTACGAGAGCAATCACCAATATTAGAGGAGCTCTGTGTGGAACTTCGTGAGAAAGAGTGCGAGTATTGCAAGGAAAAAGCACCACCTTTCTCGTACTCGTATGGGGAAATATTGCCATTTAAGTGTCATCGCCTTAAGACTGTCAAAATCAAATGTGGAGAACGTGATGAAAGATTTATCGCTTTGGTGAAACTGTTTTTCAAGATCTCAGTCTGTATTGAGAAATTTGACTTAGATAGGTGGCCGGGAAAGGGAATGCCACATTGGGCCGAAAGGGGGGGATTGCAGGCTCCTCAGGCCCAATCATGTGAAGGAAGCAGCCCGCCTCTCCCGGTGACACAACGGCGGCTGGGCACGGCCTTGGCCCCCACTGCCGCATTCGTCACTGATGGTGATGGCGATGGCACTGACTCTAGATCCAACAGGCCCGAGCTCACGGGGGACAGATTTGGCCTCATGTTGCCCCCTTCGCTAGATCTGGGGCCACCTCATCCTTGTCTCTGTCACTCCGCCTGGCAGGTCACGTTCTTGGTGACACCAAAGGCCACCGGGTTCGTGGACTACTCTACAGTGAACAACGGCTGCGAGAGGTCTCGTTTAGCTCTGTCTTCAATTTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MVPLGICTSWYLLKDYEDEDLSEDEDEDLSDGHHIEYNILGVLSHARSLKLVAPLREQSPILEELCVELREKECEYCKEKAPPFSYSYGEILPFKCHRLKTVKIKCGERDERFIALVKLFFKISVCIEKFDLDRWPGKGMPHWAERGGLQAPQAQSCEGSSPPLPVTQRRLGTALAPTAAFVTDGDGDGTDSRSNRPELTGDRFGLMLPPSLDLGPPHPCLCHSAWQVTFLVTPKATGFVDYSTVNNGCERSRLALSSIL</aaseq>

Gene Sequence

<dnaseqindica>1..171#421..462#598..788#1262..1322#3379..3618#3720..3797#ATGGTACCTCTTGGTATCTGTACCTCGTGGTACCTTCTCAAAGATTATGAAGATGAGGACTTAAGCGAAGATGAAGATGAGGACTTAAGCGATGGGCATCATATTGAGTATAATATCCTTGGTGTCCTTTCACATGCTAGAAGCCTAAAATTGGTAGCTCCGCTACGAGAGGTTTGCACAAACTACTCTGACTATTTCATCTTAAGTGGGTTTTCATTTATGTCTTGACTACTATGGTTAGTTTTATCATCGTTGATACAATAGGTAACCTAAAATTAAGTTTTGATTCTACTTTTTGGGTGTATAGGCTTGTTCGAGGGGTGCTTATTGACATGCCCGGTCTTCAACAACTTGAAATGTTTGGTACTTGGTGACTGGTGCATGGATTTTGACCTTTATCCACTACGCTGTGTTCTTAAGCAATCACCAATATTAGAGGAGCTCTGTGTGGAACTTCGTGAGGTACGTAAATTGTTCTGCGTCTTATAACCGTGCAAGGGCAACTAAGCAATGTGTGTTTTGTGATGGTTGTGTTATTGATGAGCTTACAACTGTTGTTTAGTACTAAATGAAACATTTGGTTTTGTTATATTGCAGAAAGAGTGCGAGTATTGCAAGGAAAAAGCACCACCTTTCTCGTACTCGTATGGGGAAATATTGCCATTTAAGTGTCATCGCCTTAAGACTGTCAAAATCAAATGTGGAGAACGTGATGAAAGATTTATCGCTTTGGTGAAACTGTTTTTCAAGATCTCAGTCTGTATTGAGAAATTTGACTTAGATAGGTGGTGAGTTCGGGTACAAGCCTGTGCCTTCCTAGTCTGTGAAGGCCGTAGAAACATTAAGAAATATATATATGTCTCATGATTTAAATCCTTTTTATCTGCTACTCCATACTTTGTTTTATTCTATATTAATCGCTGTCAAAATGCTAGTAGTAGCGAAGTGAGCATAGCTCAACTGGTTAGGTTCCTTGTGGTGGAACCAGCCACCCGGGTTCAAATCCTAGATTTGACACGGGTGCTCGCATTTACGGCTAATTATTCTTTCAGTGGTAGGTGACGCCATGTGTGCCTTCATAGGGGTAATTTCTCAAAAAAAAATGCTAGTAGTAATTTCTCAAGTCCAGTAATGGATTTACGGGTTAAAGTTTGAAAATCTGGCAATTGTGTCATCACCATTCACTGGGGCAACGCTGACGAAGCCACCTTCTTTCTGGGCCGAAACTGGAATACGGCCTCCGTGGGGCCCATGTATGTAGGCCGGGAAAGGGAATGCCACATTGGGCCGAAAGGGGGGGATTGCAGGCTCCTCAGGCCCAAGTAAGTTGGGCCCATATAAGAATTTGCCCGTTCCCGACAGACGCTCACCGCCTCTGATCTATGTCGCCGGCGCCACCGCGGCCGCCCGCGACCCTCTCGTCGCCGTCGCCGTCGCCCCGCTCCTCCCCTGAGCTCTCCGGCCGCCGGATATGGGCCAGTGGCGGCGGCGCGGCCAGCACCACGCCCAGCACCAGTTCCCGCGCCGCATTGCGCTGCCGGGCGCGGCCCTCCTCCTGCTTTTCCTCGCCGTCTCGCTCGTCTCCTTCTCCCTCTCCGTGCCACCGCTCACCGACCACCTCGGCCTCGCCTCCTCCTCCCGACGATCCCTCGGGAGCAGCAGCTCCCGTCGCCGCCCGGTATAACGGAAACTCTGGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTGGCGCGGATTTGTGAATGTGTGATGAATTTGTGAATGTTGTGATGGATTTGTGCATGTGTGTGATGGATTTGTCCCTTACTATCATGGGTGATGGATATATTGTTGATGAGAAATTTAGGTTATATTTTGGCTAATTTGTGATGGATATATTTTGTGCTGCTGCTGTTTACTGCTGCTGATATATAATTTCTAAATATTAGCTAGCGATTTGCTAGCCAATATTTAGAAATTATTTTTTGTTTGGATGTACCTCATCACTGACGGTTCATATTGAAAAAGCCGTCACAGGTAACCATACCAGTGGGCATGGGCTAGCGCAGACACTTACCTCTGACGGGTCGTAGTGTTCTAGGCCGTCAGAGGTGACTGTCATCAGTGACGGTCCTCTACCCGTCAAGGGTGACTGGACTCACCAGTGACCATTGATCACTGACCAAGCCCAAAGCCGTCAAAGGTGAGGGTTTGGGCCCGTCACAGGTGACCTTGTCCAGTGTAGTGTGTGACGACCGGAAAAATCCAAATATTTATATTAGATATAGATAAAATGTATCGCATCACTTTTTAACCTAACTTATTGTATCAAAATTTGTAAGTTGTTATCCTCATACACTCACTTATAATGTTTTTATCTCAAATTACACTCACTTGTTAAGTAGTTACATTAGGAGTTCTTGCATCAAATTAGATCCAACTGTCAAATTGTTATACCATGAGTTCATGTTAATCTCGTACAAAAATATACAACGCTTTCGAGACGGAGGGAGTACGTACTTGATCAACGTATGGATGACCTGCATAAAAAATACAACTCCAATGGAGTTATATATCGAAACAGCTGTCAAAGTACCAGTGTATACTACGCAATATTTGCGTTATCGTGTACCATAGAAACTAGAGACTTGTTGTCGTTGACGTTCATGGATAATTTTTCCTTTTTCCAGATTTCTAGGGATCTTCTTTTAAAAATTTATTATTGCAGCCATCAACTAACGTTACGTGGATGAACATTGTTATTATTTATATTTATTTATATAATGGAGAAAACAAAATGCCCAGGAACCTTTGGACTTGCCGTGCACTGAGGGCCAGGCAGGCGCCGGCCCGATAATTGCGTTGGGCAGCCTGGTTGCACAGATAATCATTCTCCAATTTTATACTACTATTTTGCTAACTAGCTTAATTACTGCACGAACAGTTGACTCTCCGAGATTAAGGTTTCTCCGTTGTCACCTTATTTTTGCTACTATGTTTAATTCATCAATGCTACGAGCTTATCGGCAGTCGCATGTTATAAATTNGTAATAAATAGAAAAAAATATCCGTGCTTGTGACGAGTGAAGGCTATTTTAATGGGGGTGGCTAATTGGCGCGCACGCCAGCTGGCCCCTCCCACAAGCGATTTTTTTCCTTTTTATTTTCTCGCAATTTTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAGCGGTTGTCCTCTCCCTAACGATGCGATGACGGTAGCCCTCCTCTTGACAGCAACACGAAGGTGGCGGCCTGCCTCTCTACGATGGCGTGACAACGATGGCCTAGCCATGTGACAGTGATGTATCTTCTCCATAGTCATGTGAAGGAAGCAGCCCGCCTCTCCCGGTGACACAACGGCGGCTGGGCACGGCCTTGGCCCCCACTGCCGCATTCGTCACTGATGGTGATGGCGATGGCACTGACTCTAGATCCAACAGGCCCGAGCTCACGGGGGACAGATTTGGCCTCATGTTGCCCCCTTCGCTAGATCTGGGGCCACCTCATCCTTGTCTCTGTCACTCCGCCTGGCAGGTCACGTTCTTGGTGACACCAAAGGTTAGCATCCTTATCCTCCCCTCCACCCTTTGTACTTTCCTCGTCATCCTCATCCTATCCTCCTCTCTCCTGCTAATCTTGCCACCGGTGACTGTCTGCAGGCCACCGGGTTCGTGGACTACTCTACAGTGAACAACGGCTGCGAGAGGTCTCGTTTAGCTCTGTCTTCAATTTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031212