BGIOSGA031215

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031215| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031215, complete gene.| tag = OsI_322...")
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Gene Name

BGIOSGA031215

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031215, complete gene.

LocusTag

OsI_32281

Ensembl Transcript ID

BGIOSGA031215-TA

Ensembl Protein ID

BGIOSGA031215-PA

Length

3597

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20467243..20470839

Sequence Coding Region

20467243..20467571,20467693..20467820,20467935..20468078,20468163..20468311,20468451..20468586
,20468808..20468904,20469281..20469381,20469579..20469691,20470089..20470160
,20470269..20470385,20470473..20470568,20470687..20470839

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20467243..20470839 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20467243..20470839 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCGCTGGCGGCGGGACGGGGGTCGTGCGGCAGCGCGCCGAGCCGCTGGGTGCTGGCCTCCTACTACGCGGCGGCGGGCGGAGTGTGGGGGGAGGAGGGATCGGCTGCGCCCGTCGCGCCACCCTGCGGGGGCTCGCGCTGTCTCCCCTCGCGAGACGGGCGGTCTCGGCCGCGGGTGGGCACTTCCTCCCCAGGCGCGCCGTTCGCGCGGCGGCCGCCGCCGGCGATGGGGGATTCTACGGCGAGGAGGATGCCGCCAGCGACCAGCCGTTTCCGGCGCGTGCGTCTCCCTCCGATGACGCGAACGATTCTACCGCGGTGCGCAGTTTAGGTGGGGATCATCCTGGAGAAATCAAGAAGGAGCTATTGAATCTGGCTTTACCGGCCATAGTTGGACAAGCAATCGATCCTGTGGCGCAGCTGTTAGAGACTGCATATATTGGTCGTTTAGGTCCTGTAGAGCTTGCCTCAGCTGCCGTGGGTGTGTCAGTCTTCAATATTATATCAAAACTATTTAACATCCCACTCTTAAGCATCACAACCTCATTTGTGGCTGAAGATGTTGCAAGACATGATTCCGATCAGTTTACTTCAGAAGGGAACATGTCTAGTGAGAGTGGAGGAAGGAAGAGACTCTCCTCCATTTCTTCAGCTATACTTTTGGCTGCTGCAATTGGTGTCATTGAGGCCTCAGCTTTGATTCTGGGGTCTGAAATACTCCTCAGCATTATGGGTGTGTCACATGCGTCAACCATGCATAGTCCTGCAAAGTTGTTTCTTTCTTTAAGGGCACTTGGTGCTCCTGCCGTAGTGGTTTCATTGGCTATTCAAGGTATCTTTCGTGGATTGAAAGACACAAAGACACCTCTACTTTACAGTGGCTTGGGCAACATCTCAGCTGTGCTTCTACTTCCCTTTCTCGTGTATTCGCTGAACCTTGGATTAAATGGAGCAGCTCTCGCAACTATTGCTTCACAGTATCTTGGTATGTTTCTGCTCCTTTGGTCTTTAAGCAAAAGAGCAGTTCTACTGCCTCCAAAAATTGAAGACCTTGATTTCGTTGGGTACATAAAATCTGGTGGCATGCTATTAGGGAGAACTCTTTCAGTTCTTATAACAATGACCCTTGGAACTGCAATGGCTGCTAGGCAAGGCACAATAGCCATGGCTGCTCATCAAATATGTCTACAGGCATTGATTGCAAGTTCATTTGCCAAGCTTGACTATGAAAAGGTCAAGGAGGTCACATACTATGTCTTGAAGACAGGACTGCTTGTTGGTGCAGCTTTAGCCCTTCTTCTGTTTGCCTCTTTTGGTAGAATTGCAGAACTGTTCTCCAAAGATCCTATGGTTCTACAAATTGTTGGGAGTGGTGTTCTGTTTGTTAGTGCCAGCCAACCAATTAATGCCCTAGCTTTTATCTTCGATGGACTTCACTTCGGTGTCTCAGACTTCTCATATTCTGCTTCTTCAATGATTACTGTTGGGGCAATATCTTCTTTATTTTTGCTATATGCTCCCAAAGTTTTTGGCCTCCCTGGGGTTTGGGCTGGGCTGGCTCTTTTCATGGGTTTGCGCATGACTGCAGGATTTTTGAGGCAAGTTTTTCTTTCTGACTTCCTCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MELAGGGTGVVRQRAEPLGAGLLLRGGGRSVGGGGIGCARRATLRGLALSPLARRAVSAAGGHFLPRRAVRAAAAAGDGGFYGEEDAASDQPFPARASPSDDANDSTAVRSLGGDHPGEIKKELLNLALPAIVGQAIDPVAQLLETAYIGRLGPVELASAAVGVSVFNIISKLFNIPLLSITTSFVAEDVARHDSDQFTSEGNMSSESGGRKRLSSISSAILLAAAIGVIEASALILGSEILLSIMGVSHASTMHSPAKLFLSLRALGAPAVVVSLAIQGIFRGLKDTKTPLLYSGLGNISAVLLLPFLVYSLNLGLNGAALATIASQYLGMFLLLWSLSKRAVLLPPKIEDLDFVGYIKSGGMLLGRTLSVLITMTLGTAMAARQGTIAMAAHQICLQALIASSFAKLDYEKVKEVTYYVLKTGLLVGAALALLLFASFGRIAELFSKDPMVLQIVGSGVLFVSASQPINALAFIFDGLHFGVSDFSYSASSMITVGAISSLFLLYAPKVFGLPGVWAGLALFMGLRMTAGFLRQVFLSDFLS</aaseq>

Gene Sequence

<dnaseqindica>1..329#451..578#693..836#921..1069#1209..1344#1566..1662#2039..2139#2337..2449#2847..2918#3027..3143#3231..3326#3445..3597#ATGGAGCTCGCTGGCGGCGGGACGGGGGTCGTGCGGCAGCGCGCCGAGCCGCTGGGTGCTGGCCTCCTACTACGCGGCGGCGGGCGGAGTGTGGGGGGAGGAGGGATCGGCTGCGCCCGTCGCGCCACCCTGCGGGGGCTCGCGCTGTCTCCCCTCGCGAGACGGGCGGTCTCGGCCGCGGGTGGGCACTTCCTCCCCAGGCGCGCCGTTCGCGCGGCGGCCGCCGCCGGCGATGGGGGATTCTACGGCGAGGAGGATGCCGCCAGCGACCAGCCGTTTCCGGCGCGTGCGTCTCCCTCCGATGACGCGAACGATTCTACCGCGGTGCGGTAAGTCGTAAACTCTGTGCTTGTTGTGATAAAAATGTTTTTCGAGTATTCGATGATTTCACTTTTGCCTATGGAGACTGTTTGGGGTGATGCGTGTTCAGTGTGTTCGTTGCGCTCTCAGCAGTTTAGGTGGGGATCATCCTGGAGAAATCAAGAAGGAGCTATTGAATCTGGCTTTACCGGCCATAGTTGGACAAGCAATCGATCCTGTGGCGCAGCTGTTAGAGACTGCATATATTGGTCGTTTAGGTAAATTTTCTCATCTTAAATATGAGTGACAGCAGTGTAGTGTCTGAGAAAACGAATTCAGTTCTGTGATTCCTTACAAATTGTTATGGTGTTATTTTTCTGAAACTTTGATAGGTCCTGTAGAGCTTGCCTCAGCTGCCGTGGGTGTGTCAGTCTTCAATATTATATCAAAACTATTTAACATCCCACTCTTAAGCATCACAACCTCATTTGTGGCTGAAGATGTTGCAAGACATGATTCCGATCAGTTTACTTCAGGTACTTGATGCTTACTTACTCTTATTTGCTGAAGAAATACATTGATTTAAGAATTGGGAGCTAAATTTCTCTGATGATGCACAGAAGGGAACATGTCTAGTGAGAGTGGAGGAAGGAAGAGACTCTCCTCCATTTCTTCAGCTATACTTTTGGCTGCTGCAATTGGTGTCATTGAGGCCTCAGCTTTGATTCTGGGGTCTGAAATACTCCTCAGCATTATGGGTGTGTCACATGTATGTTCAAGAATCTCATACCAATGCATTGATGCTATCCTATATGGATGCTAAACTTTAGCATATCCTTCACACTTTCGGTAGAGACTCTATTTTACTAAACCCTTGATTCAGTACTCTCCATTTATTTCTTCGGCAGGCGTCAACCATGCATAGTCCTGCAAAGTTGTTTCTTTCTTTAAGGGCACTTGGTGCTCCTGCCGTAGTGGTTTCATTGGCTATTCAAGGTATCTTTCGTGGATTGAAAGACACAAAGACACCTCTACTTTACAGTGGTAAGACTTATCACCTGCTAAATTCAATGATTTCCTATCACTTCTAGACTGTCGATTAGAATTTCAAAAGTAAATATACTGGATGGAGATATTATCCCATTGTCAGTACATCATAAAAGTTTATGATCATTAATTTTCTCTCTTAGTGACATTTGTTCTGAGTCTTCTGACAACTGAACAAAACATATATAGTCACTTACGGATCAATGCTGAATCTTCAGGCTTGGGCAACATCTCAGCTGTGCTTCTACTTCCCTTTCTCGTGTATTCGCTGAACCTTGGATTAAATGGAGCAGCTCTCGCAACTATTGCTTCACAGTACGTATTGCATTTAAATATATTCAAACAATTTCATCCAGACGTGCCACAATTTCAGGAACACACAAACTGTTTTATAGTTTAAAATTGATACAATTGTCAAATTGGTTAAAATAAACAGATGAGACAAGCTAAAATATATGTCTGTTACTGTTTCTAATAGGTTTTTCCTTTTCTGGGGTCCCAATTGTTTATCGCTTAAAGTAAGAGGGAATAGACTGTTTGAGTTTTCCATCAATGTGCTAACTAATCCTGTTTTAGTTTGTTTGCTTAAGAAATGTGCACCCCTTCCATCTTATTTATTTTTTTCTAGAATTTTTCCTACATATCGTTGATGTATTATTTGTTTGCTGCCTTTTGTTATCGAAATGTCTAGGTATCTTGGTATGTTTCTGCTCCTTTGGTCTTTAAGCAAAAGAGCAGTTCTACTGCCTCCAAAAATTGAAGACCTTGATTTCGTTGGGTACATAAAATCTGGTGAGTGGTATGTCCATATGTGGTTATTATTTTACTGTTAAGTAACTTTTGATGCTTCCAGGCTTTTGATGCACATGTTGTATTTTATGAATACTAACTTGCGCTAGCTTTTACTTTGCAACTCTAATATTTATGTACACCTTAGTGACATAACTCTTTCCTTTGTACAAGTTCTGAATACTTTTCAAACTTTCTAGGTGGCATGCTATTAGGGAGAACTCTTTCAGTTCTTATAACAATGACCCTTGGAACTGCAATGGCTGCTAGGCAAGGCACAATAGCCATGGCTGCTCATCAAATATGTCTACAGGTTTGGCTGGCGGTATCATTACTTTCGGATGCATTGGCTGTTTCTGCCCAGGTGCAACTCTCTTTTGTAATGTAATTTTGTATTTCTTTGAAAAGCTTTACATTCACTATGTTTTTTTTTTTGGCAAACATCGGTGACTTATCTTGCCCAATGACCTTATGGGGTTTGAAGTTTTCAACTAAAATATGCAAAACTGTGGGGTGCACTTAAGTCAGTACAGAATTAAGCCTTAACAAACATGCTCTCTTTAGAATTCCCCTTTTGTGAGAGGCTTGGGATGGTTGAATTTCCTCAATCATTCAACCATCCCATGGTATATGACATTTAAGCATGATCCCAATTTCTCTTGAACAGGGCCTTAGTGCATTCAATTTATTTTAGACCTATTTGATTGCAGGCATTGATTGCAAGTTCATTTGCCAAGCTTGACTATGAAAAGGTCAAGGAGGTCACATACTATGTCTTGAAGGTAATAAATAACAACCTTTATTAAATTACGCAGGTGTTATCTTCTATTGTTGGATATTATACATTGAGCATGTATCGAAGCAACTTACAACTGAACTCTATTTTCCAGACAGGACTGCTTGTTGGTGCAGCTTTAGCCCTTCTTCTGTTTGCCTCTTTTGGTAGAATTGCAGAACTGTTCTCCAAAGATCCTATGGTTCTACAAATTGTTGGGAGTGGTGTTCTGGTATGTGCCCCTTTTTTTTGTCATACTACAATAAGATCTTCAGCACTGTCAACGTCATCTTTACCCGTTCTGTTTTTGTTTTTGAAGTTTGTTAGTGCCAGCCAACCAATTAATGCCCTAGCTTTTATCTTCGATGGACTTCACTTCGGTGTCTCAGACTTCTCATATTCTGCTTCTTCAATGGTATATACACTTACATAATAAATCTGTAATATTTTGATCTTGCATTAGCTGCAACTATTTAGTTTGCCACTGTGTCCTTTCCTTTCTGCTGTGATTAATTACTGTCTTTTGTCTACAGATTACTGTTGGGGCAATATCTTCTTTATTTTTGCTATATGCTCCCAAAGTTTTTGGCCTCCCTGGGGTTTGGGCTGGGCTGGCTCTTTTCATGGGTTTGCGCATGACTGCAGGATTTTTGAGGCAAGTTTTTCTTTCTGACTTCCTCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031215