BGIOSGA031219

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Revision as of 09:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031219| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031219, complete gene.| tag = OS09G05...")
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Gene Name

BGIOSGA031219

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031219, complete gene.

LocusTag

OS09G0549450

Ensembl Transcript ID

BGIOSGA031219-TA

Ensembl Protein ID

BGIOSGA031219-PA

Length

4907

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20560901..20565807

Sequence Coding Region

20560901..20560964,20561894..20562636,20562827..20562874,20563319..20564204,20564933..20565807

Genome Context

<gbrowseImage1> name=IndicaChromosome09:20560901..20565807 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:20560901..20565807 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAATCTCCAATTAGTACACCGCCCCTGATCCCCTCTATGCGCTTATGCAGTCACCAATGTGATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MESPISTPPLIPSMRLCSHQCDSEGNLTCMEEGDPQPSISLARTPSEGAAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCLTDASVATTTPANSWWIQPSGASTSVRERFDQALAYIRETQRDADVLVQLWVPVKGNDGQLVLTTSGQPFTLDQRSNSLIQFREVSTKYQFSADVASGSSPGLPGRVFIGRLPEWSPDVRYFTSYEYPRISHAQYLDVHGTMGLPVFERGNYSCLGVIELIMTKQKLNFTSELNTICSALQAVNLTSTEVSSIPRTKLNSASYKDALPEILEVLRAACITHKLPLAQTWVTCAQQGKRGSRHSDENYKYCISTIDAACYVNEPRMQSFHEACSEHHLLRGQGVAGKAFTTNQPCFLPDIGSSTKLEYPLSHHAKIFNLKGAVAIRLRCTRTGIADFVLEFFLPTDCEVLEEQKAVLDSLSGTMRSVCQTLRVVTDKEMEDEAMREMNELNSFSPRGKNKVEELSFGDNTRGDREEASWTTLVGTSQKGSDLAELHTHGMLSHGGHGSSQAGDQTSKEGSKVKRRTKTEKTVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKVDHSLRKLQQIIDSVHGAETAFQLNTLYKDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQHHRLSSNIPSTSLSHSSCSQSSDSSPSCSGGATKHSPQVGADQVRSGCLPQHSPVQTLQTEAASINEHFSGQEAPIDLLQDVAEKANGEQHMSQSPSSPKQTANVGMRVKVTFGSEKVRFRLKPECDFQELKQEISKRLSIADMNSLIVKYLDDDSEWVLMTCDADLHECFHVYKLADIQTIKISVHLAASPTTRITIGHTGFS</aaseq>

Gene Sequence

<dnaseqindica>1..64#994..1736#1927..1974#2419..3304#4033..4907#ATGGAATCTCCAATTAGTACACCGCCCCTGATCCCCTCTATGCGCTTATGCAGTCACCAATGTGGTTAGACCTGTGGCCTGCATTTTAGTAGTCTACTATGTGGCCTCATGCCCAGCATGTGATGTGTAAAACTACAATCAAACAAATAAAGAAAAGACTGTACTCTGATAACATAGTGGCAACAATAGGTGATTTAGTTCTGTAATTCTGTTAAAAACGACTCTCCCTAGTTTGCCCCCACTTCGCAATTACCCATGGTATTGCAAGGGAGGATTTCATACGGAGGAATCCGTCTCAAGCAACATAATTACCATCAAGTTGACTTTAAAAATGGAAGTGGGTATGGCTGGATTCCTTTGTGGTGCTGGGTCCCTCAGTGAGAGGGAAAGATTCTAACAAATAAAGAAAAGAACAATGCAGCGGTGGCCCCATAAGCTTTGTTCTTACGACAAAACCAGACAAACAAAGGCAAAACCAAAGCAAGGACAGGCCAAGCATAGACAATTTTGCTTTCCATCCTACAGCAGCAAGATTCATCAGATGCCTTTGGAATGAATGGTGGGAGGTGTTCTGGTGGAGCACTAAACCTTTTCTAGAGCTACTACTTGTTGGAGGCTAACACCGAGCTAGGAAGAAGAAAGGAGACTTTTTCATGAGGAGAAGGGAGGCATACGATTACCAGTGAGCTACTACTCTATCAATCTCTTTCTTTGCTTCCTTTCTGTAGAAAATGATGTGTTCTTCCCTACTACCCACACCCTGCAATCCAAACGCAGGCAAATCTAGCACAAAATTCATCCCAGGACTCCCAGTCTCCTGTACTCCCCTTGCCCATGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAAGTATTATGACTTGCATGCTCCTTGCCCAAGTTCTTGTCATCATTTCCAAGAGCAAAACCATCTTGTTGGCTTTAATACTGATGCAGTAACTATGGTGTCAAATTCTGTGACCAGATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTTGGATCTCCTTGAGCAGCTTCTCTCAGCCGACAACGCCTGGCTTGAAGTGGCAGCAAACACTTCACGCTCACCCAACTTCTTTGCTACCCCCTCCAACTGCTTGACAGATGCTTCGGTCGCCACCACCACACCTGCAAATTCATGGTGGATTCAGCCGAGCGGTGCAAGCACCTCAGTTCGGGAACGGTTTGACCAAGCTCTAGCTTACATCAGGGAGACACAGAGAGACGCCGATGTGCTTGTGCAGCTCTGGGTGCCAGTCAAGGGCAACGATGGTCAGCTGGTGTTGACGACGAGCGGGCAGCCATTCACTCTCGATCAGAGGTCCAATAGCCTCATACAGTTCAGGGAGGTTTCGACAAAGTACCAGTTCTCTGCAGATGTTGCTTCAGGTTCCTCACCTGGGCTACCAGGGAGGGTGTTCATCGGTAGGCTTCCTGAATGGTCACCAGATGTTCGATACTTCACCAGCTATGAGTACCCTAGGATCAGCCATGCACAATATTTGGATGTCCACGGGACGATGGGGCTGCCGGTGTTTGAGAGGGGGAACTACTCATGCTTAGGTGTCATCGAGTTGATCATGACCAAGCAGAAGCTCAACTTCACCTCCGAGCTCAATACCATTTGCAGTGCTCTCCAGGTATGAGCATCACTTACTCTGAAAAGTTCAAAAAAGAAATCTTGTTGTAAGTATCTGACCAAGAAATAAACTTGGTTGCACAAGAAAGAGCACGTATGGTTTCACCAAGACATGATGACTATTGATTACAGTAGGAAGTAACTGAATATTTTAGGCATATGGACTTTCTTAATGCTAATGCTCTTTGCAGGCAGTTAACCTGACAAGCACAGAAGTTTCAAGCATTCCGCGCACAAAGGTAAGCAGCAACAGAAATTTGAGAATGTTGTATCACAGTTTTGAGTTGGGGCAATATATGTATTTCATTTCGGACAAAACAATGTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTACCACATACATATTGATGTTAATAAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGAGAAATGCTAGAATGACTTACATTGTGAAAAGGAGGGAGTAGTACTTATATATACCATAACCATATGGTGTAAACACATGATAGAGTAACACCTGACATTGGCATGATTTGGAGAACTACTGTTAAATTTTGCATTCTTTAGAAAAGGAAATACCAATCTAGGTAAATGTTGATATAAAGATCTTGATATAAAAATGTGCTTATATATTCTTGTGACTTATGGCTGTTCTTGTTGATTATCAACCAGCTTAACAGTGCTTCCTACAAAGATGCTTTACCAGAGATACTAGAAGTCCTGAGAGCAGCCTGCATCACCCACAAGCTACCATTAGCTCAGACCTGGGTCACATGTGCTCAACAAGGAAAGCGGGGCAGTCGCCATTCTGACGAGAACTACAAGTACTGCATTTCCACCATTGATGCAGCATGCTATGTGAATGAACCCCGGATGCAGAGCTTCCACGAGGCCTGCTCCGAACACCACCTGCTACGGGGGCAGGGGGTTGCAGGGAAAGCCTTCACCACAAACCAGCCATGCTTCCTACCAGATATTGGATCCTCCACTAAACTGGAGTACCCATTGTCTCACCATGCTAAGATTTTCAATTTAAAAGGTGCAGTGGCAATCCGATTGCGTTGCACGCGCACAGGGATTGCCGACTTTGTGCTAGAGTTCTTTCTGCCAACTGACTGTGAAGTACTTGAGGAGCAGAAGGCAGTGCTGGACTCATTATCAGGCACCATGAGAAGTGTTTGCCAAACTTTACGTGTTGTTACTGACAAGGAGATGGAGGATGAGGCCATGAGAGAAATGAATGAGCTGAACTCATTTAGTCCTCGGGGCAAGAACAAAGTTGAGGAGTTATCCTTTGGAGACAACACAAGAGGGGATAGAGAGGAGGCATCTTGGACAACCTTAGTAGGGACTTCACAGAAAGGATCAGATTTAGCTGAATTGCATACACATGGAATGTTATCACATGGAGGGCATGGTTCATCTCAAGCTGGTGATCAAACAAGTAAAGAAGGTAGCAAAGTGAAAAGGCGTACAAAGACGGAGAAGACCGTGAGCTTGCAGGTCCTTCGGCAGTACTTTGCTGGGAGCCTGAAGGATGCAGCAAAGAGCCTTGGAGGTGAGTGACATTAACTTATCAGATAAATGCAAGATTCAGCTATGTATACTTTACTATTTAAGTAGATACCATCAGCCATTAAACTATTAACAAACCCAAGCCATGACGCCAGCATTAACTACTGAATAAGAAAACATTCTTCCATAAAAAAGGTCAACCTTCACATGCACCTTATAGTCAGAATGTGAGCATTGTTATCACCCTATTTTTTCGTGATTCGTGCTATTGCATGAAGGTACAAGGTAAAATTTAGTCACTGTAAACTGATTCATGGAAATAGGGAGAATGACTTAGCAAGTCAACTGTACGGTTTTGGCTGTTTGAGCAGATATGTATAGCCTAGAATTGATCAGTCTCTCATGCAATTATTACTTACAGCTGAGCAGCAACTTCATGCAATAAACATGACTTGAAAAATATATAAAGACAAGAAATATGTAACACACTACAGTCCAGAAACAAGTCCCTAAGTTGGTGTGCCATGTTGCTTTCTAGAAACAGAATAGTTGGTTTGGGAGTTCCATGGATAATAGGCAAAATTATTCCTTCCAGGGGAAAAAAAGACAGCTGTTCATCATGTGCATATACTACATGGCTTGCCCGCATTCTTTTTTAGTAAAAATGATTTATATGTGTTTGATCTAGTGGTAAAAAAATCAAAAAAGAGGAAAAAGCAACTGTATTAAAATTGGCTGCACATATACTCACCACATCTTTTTCTCTCACAGTGTGCCCAACCACCCTGAAAAGAATATGCAGGCAGCATGGCATAAACCGCTGGCCATCACGGAAGATAAAGAAAGTAGACCATTCTCTAAGGAAACTGCAGCAAATCATTGATTCAGTTCATGGAGCAGAGACAGCTTTCCAGCTTAACACCCTCTACAAGGACCTCACAAACACCTCTGTATCATCTGACAACAATTTGTCAGGAAGTGTCACAGTTCCTCTGGCTAACCAGAACAATCTAGACTTTGAAATGCACCAACACCACAGGTTAAGCAGCAATATTCCATCGACTTCACTCTCACACTCATCATGCAGCCAAAGTTCCGATTCAAGCCCTTCCTGCAGTGGAGGAGCAACAAAACATTCACCCCAGGTTGGAGCTGATCAGGTGAGGTCAGGATGTCTTCCACAACATAGCCCTGTCCAGACTCTGCAAACAGAAGCTGCTTCAATAAATGAACATTTCTCAGGTCAGGAAGCACCAATAGATCTCTTACAGGATGTTGCTGAAAAGGCAAATGGTGAACAGCACATGTCTCAAAGTCCATCATCCCCCAAGCAGACTGCAAATGTAGGTATGAGAGTAAAGGTCACTTTTGGCTCAGAAAAGGTGAGGTTCAGATTGAAACCTGAGTGTGACTTTCAAGAACTGAAGCAGGAGATATCAAAACGTCTGAGTATAGCAGACATGAATTCCTTGATTGTAAAGTATTTGGATGACGATTCAGAATGGGTCTTGATGACATGTGATGCAGATTTACACGAGTGTTTTCATGTTTATAAACTAGCAGATATCCAAACAATCAAGATTTCAGTTCATCTGGCTGCTAGTCCAACAACAAGGATCACCATTGGTCACACTGGTTTCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031219