BGIOSGA031257

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Revision as of 09:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031257| Description = BGIOSGA031257| Definition = Oryza sativa Indica Group BGIOSGA031257, complete gene.| tag = | tid = BGIOSGA031257-TA|...")
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Gene Name

BGIOSGA031257

Description

BGIOSGA031257

Definition

Oryza sativa Indica Group BGIOSGA031257, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA031257-TA

Ensembl Protein ID

BGIOSGA031257-PA

Length

3533

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21075605..21079137

Sequence Coding Region

21075605..21075661,21076142..21076414,21076496..21076548,21077181..21077361,21077842..21077982
,21078116..21078512,21078598..21078800,21078913..21079137

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21075605..21079137 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21075605..21079137 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTTTTTCAGTTGATCCAGTAGTTTGTTTCCTCTACTGGCGAATCGTGACAAATATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTTTGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGCAGCTATTCCTATTACTGTTAATTATTGCATATTTATCTTCTAATAGAAAATCTAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGTCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTNTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGAATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACATCACAGTTGCTTTCTGCTAAGAAAACCAACCCTGCTGCTCATTCTAGCAAAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGCTTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATGCCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCCTTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCACGCATTTGCATCTCCGCAAGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTGCCCTCTTGTGGCCGTTGGTTTGGTGCACGCGTGCCATCAGACTGCAGCCATCCTGATATTCATCACGGTGATGCTCGTCTCAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MRFSVDPVVCFLYWRIVTNMEDGVSTYTVDEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVFVGLLVGAYSWGIVSDNYGRRQLFLLLLIIAYLSSNRKSRVGFNFTALVTGGAGLLSAFAPNYLSLIVLRFMVGVGLGGGPVLSSWFLEFIPAPNRGTWMSVMPSLGWRWLLAFSSLPSFALLLFYPLTLESPRYLCMKGRTADAVQVXETMARLNRVALPSGHLMSGHRMELHELTDSSETSQLLSAKKTNPAAHSSKTEIGGRNAILKLLSPNLIRSSLLLWTVFLGHAFLYYGLVLLTSELSHGNKICGSEGIVTMQTNHSNDANLYRNVFITSFGEVPGLILSAAIVDKIGRKLSMSSMLYISCLCIAPLMVPQTESLTTIFLFGARICISASFIVLHIYAPEIYPTAVRATGVGFASSIARFGGILCPLVAVGLVHACHQTAAILIFITVMLVSGVAVSYFPLETSGRKLSDHIAA</aaseq>

Gene Sequence

<dnaseqindica>1..57#538..810#892..944#1577..1757#2238..2378#2512..2908#2994..3196#3309..3533#ATGCGTTTTTCAGTTGATCCAGTAGTTTGTTTCCTCTACTGGCGAATCGTGACAAATGTGTGACTTGTTTGGGATATGCTACGGCAACTCGAACCTTTAGTCGGTTTGAACGCTGGTCCGCTAATCCACTTCTCAGTTTCTTTTTTCTTTTTAATTTTTGGGTCTGTTTTTGTGGATCAGTTTCTACTGATTAGGCAGATCTGAACCTTGCTTTGAGACCAAGCTAAAGTTTTTCTCTTTGGCCGGATTGGCGCAGAGAAATTAGTTATCTTGTTTCTTTTTCTTTGCCAAATGTTAATTAACCGCAGTGAAGGATTAGCCTAGTAACAGTATCCCATGAATGATTAAGTGCATGACCTAATGACAAAATATTTTGGTGCTGTTATTTTGTTCTTGTAAAGCATGATGTTTAGAATAGCCATCCATTCCTGTTCTATATCCTATGCTGTCACGTAGACATGATATGTTCTCCTTCCCTGCTGAAAAATAGGCTTGCAATCAGTTAGTATTTGCCTGATGCTTGTTTGTTTCTTTCAGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTTTGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGCAGGTCCTTTACTATTTACATTCCACTGTTTGTCAGATTTATTTGAAATCTTCATTATAAACCTCTCTCCCTAACAATATACAGCTATTCCTATTACTGTTAATTATTGCATATTTATCTTCTAATAGAAAATCTAGGTATTGGCATTTTAACGAGTCATGGTGCTCTTGAATGATATCAAATCCGTATTATAGATATGATAGTACAACTCTTCACCCTATGGCTTTACTAAATACGATGTCTTCTGGGATAGTCAGATTAATGTAACCCTTGCTAGAGCTTCTTTGAGAGACTGAGAGCCTGAGAGACAAGAGCTTGTGGAGTTTGGATGTAGGCCTGCAAATCCCCATATACTAGACTGTTCCCACTTTTCAGTGACAATGAGTGCTACAACCCAGCTGATTAACCATATAGCAAATTGACAGAGACAATATCATGGTTAGGAGGAAAATGTGCATGACACTAGATGACAATCTGAAATTCATTTTACTTGGGGATTCTTCTGGCCTTCCAGTTTTTCTAAAAAAGTTCCAAGATACTCCTTTTAAATTTTCTGTTCATGCAATAACAAGAAAATTACTTGGATTTCATAAGGATCACTCACAGAAGCCCTCTACAGTACTTAATCACCTTGAGATGATGTTTTCATACATTGCTGCTGATAATTTTAATAGCCAGTTCTCTCATTAATCTAAAAGTATACTAAAAATACGCATTTTACAGGATGTAACTTTATTTTTCTGACTGTATTCCCTTGATACTTTTCCAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGTAAATTTCTACATTTTGCCAAAGTAATACTACTGTTTGCAATCTGCCTTGGGTCATAGTGGTTCAACTGATCATACAAGTCAGTTAAACAGAACGATGCAACATATGATTTTAAAACAGTCGCTATATTTATTAAAACAGTGGAGATTAATGTAATTGAATTTCTTTGGTTCTGCACTGCAGCTTCGATGCATGTGTTTCTGCTACCCTGAGTAAATTTAACAGTGATAAAATATTAGAATAGATCAGATCCCATGGAACAGAATAATGAGCTTGCATTTGGTTAGTCAGTGATGATTTATGCATTTCATATAATGTAATGGAAACTGCAATGAACAATATGTTGCCTTCTAGTATGTACTGATGTATGCTCCAAACTGTCATTCTAATTTTGTAGGAACTTATTATTTGTTTAATTTTCAGTCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACCACGGCACGATTAAACCGTGTAGCTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTNTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGAATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACATCACAGTTGCTTTCTGCTAAGAAAACCAACCCTGCTGCTCATTCTAGCAAAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGCTTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATGCCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGGTACATGTGTTTCCCCCTTAGGCTTTACCATATTTCTTGAGAATGTTCTACTTCATGTAATCACATTCATATCACACTGTTGCAGAGGTTCCTGGCCTTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCACGCATTTGCATCTCCGCAAGCTTCATTGTCTTGCACATCTATGCTCCTGAGGTTTGCTTGATCACTCCCAACATCCCCAATACTTGGTTACATCGCTTGCAACAATAAAAAGGGAAATAAAATCACAAACCATTGCCTCATGTATTATCTTCTTTCCTTGCAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTGCCCTCTTGTGGCCGTTGGTTTGGTGCACGCGTGCCATCAGACTGCAGCCATCCTGATATTCATCACGGTGATGCTCGTCTCAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031257

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA031257&oldid=30461"