BGIOSGA031258

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Revision as of 09:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031258| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031258, complete gene.| tag = OJ1065_...")
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Gene Name

BGIOSGA031258

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031258, complete gene.

LocusTag

OJ1065_E04.21

Ensembl Transcript ID

BGIOSGA031258-TA

Ensembl Protein ID

BGIOSGA031258-PA

Length

4883

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21079903..21084785

Sequence Coding Region

21079903..21080008,21080138..21080276,21080438..21080509,21080588..21080653,21080768..21080839
,21080964..21081035,21081212..21081283,21081375..21081440,21081729..21081794
,21081871..21082085,21082446..21082717,21082976..21083241,21083336..21083456
,21083691..21083827,21083959..21084115,21084651..21084785

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21079903..21084785 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21079903..21084785 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCGCCGGTGGCCGCCACTGGTGGTCGGCCTCGCTCTCCTCCTCCTCCTCCTCCTCTCCGTCGCGGCCTCCTCCGTGGTGGCCAAGACCGACCAGCCTGACGTTGCTGCTCTGAACGTGATGTTTGAGAGCATGAACAAACCGTCTGAATTGTTGGGTTGGAAAGCGAGCGGCGGTGATCCGTGTGGTGATGACGACGAGTGGAAAGGGATCGAATGCAGCGATTCATCTGTCACAGAGATCAAATTGTCGGGGCTTGGATTAAGCGGCACGCTAGGTTATCAGCTATCGAGCTTGAAATCAGTAACCAAATTCGATGTCAGCAAGAACAATTTAAATGGTGAAATCCCATACCAGCTTCCACCAAATGTGGTTCAGTTAAATCTTCGAGGAAATGCCTTCAGCGGTGGTGTTCCTTATTCGATATCTCAGATGACTGATCTGGAAACGCTAAATCTTGGTAAGAATCAATTGAGCGGGCAGTTGACAGATATGTTTTCTCAGCTGCCAAAGCTTACAACAATGGATTTGTCATTCAATAGCTTCTCAGGCAACCTGCCTCCGAGTTTTCAATACCTCAAGAACCTCAAAACACTAGATGTGGAGAGCAACCAATTCAGTGGTCATATAAATGTGCTGGCCAAACTTTCTCTTGAGGATCTGAATGTGAAGAACAACAAGTTCACTGGGTGGATCCCAAGTAAACTGAAGAGCATTGACAATTTAGAGACTGGTGGGAACTCTTGGTCATCTGGGCCAGCTCCTCCTGGCATGGAGGAGTCTTCGGCAGGAAGCTCAAATGGAAGGGATGATAGCGGAATCAATGGTTTCGCCATTGGAGCAATGGTGATAGCTGTGCTTCTTGCAGCTCTGATTCTCTTGTCTGTGCTGAGGAGGAATCATTCCTCTCCCGTCTCATCTCATTACTACACGGACGAGTCAGGCCGTAGGAATTCTTCAGTAGTCAACATGAAGTCACTGGAGCATTCCCCATCGATGGGCTGTAAGACACCGCCTGCTGTTCCTCGCAAGTCGATGAGTGACAATGAGTTTGAGAACAAACTGAATCATTCGAGGCGAAGCACAGACCCCATCAGCTTGATGAATCATTCATCATCAGACCTACTAGCAGCTACTGGCAACTTCTCTAGTAGCAGACAACTAGGTCAGGGGACAACCGGTTGCGTTTTCAGGGCAAAATATGCTGACGGACGGGTACTGGCTGTCAAGAAGTTTGATCCATTGAGCTTCTCAGGAAGCAGTGACTTCATGGACACCGTCAACGGCATTGCCAAGCTGCGCCATACAAATATCTCTGAACTTGTTGGTTACTGCTCAGAGCCTGGGCACTACATGCTGGTCTATGATTACCATATGAATGGATCCCTGTATGATTTCCTGCACTTGTCAGATGCCTACAGTAGGCCTCTGACCTGGGACACCCGAGTTCGGATAGCTGTCTGTACAGCCCATGCTCTGGAGTACCTACATGAGGTCTGTTCACCTCCAGTGCTCCACAAAAACATAAAGTCTTCAAATGTCTTGCTTGATGCTGATCTCAACCCTCACCTCTCGGATTGCGGCCTTTCATTCTTCTATGAGGACGCAAGTGAGAACTTGGGACCTGGGTACAGTGCTCCAGAGTGCTCAAGACCATCAGCTTACGTGATGAAGAGCGACGTCTACAGCTTCGGAGTCATCATGCTGGAGCTACTAACCGGCCAAAAGCCTTATGATAGCTCCAAGCCAAGAACAGAGCAGTGCTTGGTCAAGTATGTGGCTCCACAGCTCCATGACAGCGATGCCTTGGGATCACTGGCAGATCCAGCTCTACGCGGTCTCTACCCACCAAAGGCGCTCTCCCGCTTCGCTGATTGTATCGCTCTCTGCGTTCAGGCTGATCCAGAATTCCGGCCGTCCATGTCGGAGGTGGTGCAGTCGCTCCTCCGCTGCGTGCAGCGCACCATCAGCAACAGGGGGATGGCCGGATACTTAAGCAACTCACAGCGGAGCGACATCTCCGATTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MARRWPPLVVGLALLLLLLLSVAASSVVAKTDQPDVAALNVMFESMNKPSELLGWKASGGDPCGDDDEWKGIECSDSSVTEIKLSGLGLSGTLGYQLSSLKSVTKFDVSKNNLNGEIPYQLPPNVVQLNLRGNAFSGGVPYSISQMTDLETLNLGKNQLSGQLTDMFSQLPKLTTMDLSFNSFSGNLPPSFQYLKNLKTLDVESNQFSGHINVLAKLSLEDLNVKNNKFTGWIPSKLKSIDNLETGGNSWSSGPAPPGMEESSAGSSNGRDDSGINGFAIGAMVIAVLLAALILLSVLRRNHSSPVSSHYYTDESGRRNSSVVNMKSLEHSPSMGCKTPPAVPRKSMSDNEFENKLNHSRRSTDPISLMNHSSSDLLAATGNFSSSRQLGQGTTGCVFRAKYADGRVLAVKKFDPLSFSGSSDFMDTVNGIAKLRHTNISELVGYCSEPGHYMLVYDYHMNGSLYDFLHLSDAYSRPLTWDTRVRIAVCTAHALEYLHEVCSPPVLHKNIKSSNVLLDADLNPHLSDCGLSFFYEDASENLGPGYSAPECSRPSAYVMKSDVYSFGVIMLELLTGQKPYDSSKPRTEQCLVKYVAPQLHDSDALGSLADPALRGLYPPKALSRFADCIALCVQADPEFRPSMSEVVQSLLRCVQRTISNRGMAGYLSNSQRSDISDW</aaseq>

Gene Sequence

<dnaseqindica>1..106#236..374#536..607#686..751#866..937#1062..1133#1310..1381#1473..1538#1827..1892#1969..2183#2544..2815#3074..3339#3434..3554#3789..3925#4057..4213#4749..4883#ATGGCTCGCCGGTGGCCGCCACTGGTGGTCGGCCTCGCTCTCCTCCTCCTCCTCCTCCTCTCCGTCGCGGCCTCCTCCGTGGTGGCCAAGACCGACCAGCCTGACGGTGAGCCAAGTTTTTTCTGCAATTTTTTTTTCAGATTTTTCATTCGGTTTCCTCTCTTTCAATCGATGATATTCATGGATTGGATTCTGAAAGATGTGGTTTCCTGACTGTTTGCCTTCTCTGTTTCAGTTGCTGCTCTGAACGTGATGTTTGAGAGCATGAACAAACCGTCTGAATTGTTGGGTTGGAAAGCGAGCGGCGGTGATCCGTGTGGTGATGACGACGAGTGGAAAGGGATCGAATGCAGCGATTCATCTGTCACAGAGATGTAATTCACTGCAGCACTTTTTACCTTTGGGATTCTTGATTTGCTTGTTTTTTTTCTTTAAAAAAAGACGGATGAACAGGCGCACTTCTGAAGAACTTTTCTCTTTTTCATACAAGATGTTCACTTCAGTTTGCTAATCGCGTTGCATTTGCATAGAGCAGCAAATTGTCGGGGCTTGGATTAAGCGGCACGCTAGGTTATCAGCTATCGAGCTTGAAATCAGTAACCAAATTGTGAGTTGCCCCTGTGATTTCCTGTACTGATCATCCTAGTTATGCAACTTAGTGAATTTTTTCTCTTTCATAGTACAGCGATGTCAGCAAGAACAATTTAAATGGTGAAATCCCATACCAGCTTCCACCAAATGTGGTTCAGTTGTAAGTTTCTGGATTTGTCCATACGTACTTGCTGTTTTCATGGGTAATACAAGTTTTTTTTTTCTCTAGCACTTTTTTAAAGGGTTTTCTTATATTCTCTTTTCTCTAATACAGAAATCTTCGAGGAAATGCCTTCAGCGGTGGTGTTCCTTATTCGATATCTCAGATGACTGATCTGGAAACGCTGTAGGAACTTTTCATTCATACCACTATATTAGTATTTTCAGTTGTTTTGTTTTCCTGTACTTACGCATGATTCTGATATCTGTTTTGTTGATAACTTGAAATATTTTTTCCCCATGGATTACAGAAATCTTGGTAAGAATCAATTGAGCGGGCAGTTGACAGATATGTTTTCTCAGCTGCCAAAGCTTACAACAATGTAAGCATGATTTATAAGTTTTTCCACACACCAAAGAAAGAAAAAAATAAGAGTTCTCTGTACTTTTTCTATTACATACCTACATAATTGTAAGTTCGCGCAATGCAAAGTAATCATGGTGCCAATTCTCATGTTACTTCTATTGCCCAAATCTTATATATCAGTTGTGTCTTCAGGGATTTGTCATTCAATAGCTTCTCAGGCAACCTGCCTCCGAGTTTTCAATACCTCAAGAACCTCAAAACACTGTAAGAAACTGAATTTTATGAACTATAGTAATTCATCGATAAGTTATTTTGGATGCTCAATTGACTGCCATTGTTTCCAAAATATATACAGAGATGTGGAGAGCAACCAATTCAGTGGTCATATAAATGTGCTGGCCAAACTTTCTCTTGAGGATCTGTAAGTGCTATTCAAGTGAAAACTGCATCCGGAACTACTCTTATCATTGTCCTTCAAAATATATTATTCCTAAATGGCTCACAGCGGCAATACCGAAGTATTGATGTTATCAAATATCAAGAGCTGTTAATAAAATTTAATTTTTTAGGCACAATGCAATCGTTATTTGTTTTCTATAGCTTAACTACATTACTTAAAACTCATAAGTACAATCTCAAACGTATGAATTTTCTTAAGCACATCAGTTAGGAACTAATCTAGAATGGTTTTCCTCCTTTTGTTCCCAAGGAATGTGAAGAACAACAAGTTCACTGGGTGGATCCCAAGTAAACTGAAGAGCATTGACAATTTAGAGTAAGTGGGACATCCAGTCAATATGCCTATTTTTGTTGTACTTGTGAAATCTGATAGTTCTGGTCACATGATGAAGGACTGGTGGGAACTCTTGGTCATCTGGGCCAGCTCCTCCTGGCATGGAGGAGTCTTCGGCAGGAAGCTCAAATGGAAGGGATGATAGCGGAATCAATGGTTTCGCCATTGGAGCAATGGTGATAGCTGTGCTTCTTGCAGCTCTGATTCTCTTGTCTGTGCTGAGGAGGAATCATTCCTCTCCCGTCTCATCTCATTACTACACGGACGAGTCAGGTCAGAACCAACCATTTACCCCGCTAGTTGATGACTCGAGAAGTATTTATGCACACTGTATCTCTTGAATTATACTCCCTCCGTTTCATAATGTAAGTCATTCTAGCATTACCCATATTCATATAGATGTTAATGAATCTAGACACACATCTATATCTAAATTCATTAACATCTATATGTATGTGGGCAATGCTAGAATGACTTACATTATGAAACGGAGGAAGTAGAAAACTACGTGAGTTCCTTTCAGCCGTGCATCATTTTGTGATGTGTAGGGAACTACGAATAATGTGATATGTGATTCTGGTAATTTAAGTTTGAGACGTGCACTAAGAGTTCTCATCTTGCTTCATTTTCTAGGCCGTAGGAATTCTTCAGTAGTCAACATGAAGTCACTGGAGCATTCCCCATCGATGGGCTGTAAGACACCGCCTGCTGTTCCTCGCAAGTCGATGAGTGACAATGAGTTTGAGAACAAACTGAATCATTCGAGGCGAAGCACAGACCCCATCAGCTTGATGAATCATTCATCATCAGACCTACTAGCAGCTACTGGCAACTTCTCTAGTAGCAGACAACTAGGTCAGGGGACAACCGGTTGCGTTTTCAGGGCAAAATATGCTGACGGACGGGTAGGCTCCTACTGTTTGCTTTCTAAGATCTTTCCAAATAAACTTGTTTACAGGCTCAATTCAGGTAATCATCTGAGTAAAAATTGAAGTGACACAAAGATCATGTCAAATATGAATTTAAAACACATTGCAGTAACCAGATTATTGAACTGAACTAGATACTAAGGTCTCAAAGAAGAATGCTTGAGGAGTTCAAAGAGGTCATATACCTTGAATTATATGTGTACTAGCTCATCAATTACCATGAACAAATTTCAGGTACTGGCTGTCAAGAAGTTTGATCCATTGAGCTTCTCAGGAAGCAGTGACTTCATGGACACCGTCAACGGCATTGCCAAGCTGCGCCATACAAATATCTCTGAACTTGTTGGTTACTGCTCAGAGCCTGGGCACTACATGCTGGTCTATGATTACCATATGAATGGATCCCTGTATGATTTCCTGCACTTGTCAGATGCCTACAGTAGGCCTCTGACCTGGGACACCCGAGTTCGGATAGCTGTCTGTACAGCCCATGCTCTGGAGTAAGTTGACAAGTAACATGGAATCCGAGAATCCAAAAATACATCAATTTGAGTTCATCTGTAAGATTTTATCCCTCTCTTTTCATTCATTCAGGTACCTACATGAGGTCTGTTCACCTCCAGTGCTCCACAAAAACATAAAGTCTTCAAATGTCTTGCTTGATGCTGATCTCAACCCTCACCTCTCGGATTGCGGCCTTTCATTCTTCTATGAGGTTTGCATGCAGAGTGGCTCTTCTTTAACAATTGATGAACAAAGTATAATTGTAAGAACAATGTGGGCTGTATTTAGATCCAAAGTTTAGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTGTCATATACACACAACTTTTCAGTCACATCATCTCCAATTTCAACCAAAATCTAGACTTTGCGCTGAACTAAACACAGGCGTGGTCTAACGGTATAGAAATCTCTACAGGACGCAAGTGAGAACTTGGGACCTGGGTACAGTGCTCCAGAGTGCTCAAGACCATCAGCTTACGTGATGAAGAGCGACGTCTACAGCTTCGGAGTCATCATGCTGGAGCTACTAACCGGCCAAAAGCCTTATGATAGGTGACTCAAGGGGGCAAAAAGATAAAACCTTGAAATTCACTTCTGATATCCATAATGTGATGCATCATCTAATGTCTGCACTCTGCACATTATGCTTACTTTCTCTATGTGGCTGTCTGATGGTTCTACAGCTCCAAGCCAAGAACAGAGCAGTGCTTGGTCAAGTATGTGGCTCCACAGCTCCATGACAGCGATGCCTTGGGATCACTGGCAGATCCAGCTCTACGCGGTCTCTACCCACCAAAGGCGCTCTCCCGCTTCGCTGATTGTATCGCTCTCTGCGTTCAGGTGAGCTCCTTATTGTCAAAGATATCCCCATCAATGTGCTCCATGTCTGAACTCTGAAGTAATTTCAGACATAGTATGCTATGTCATTCAACCTGAGTAGCATCCCAAGGTCCTTAGTTCAAATCTATATAGGAGCGAATTTCATATTGTTTATTTGAGGGCTAAGTTCCTAACTTTATAAAGGCTGCATATATCTGGTTGAATGTAGAGTCCAAGTAAAAAAAAAAACCTTCTATAAAAAAATAAAAAAAAAGTCTGAACTCTCAAGTAATTTCAGACATACTATGAAGCTAGTAGTCTGAACTCTCAAGTAATTTCAGTACAGTATGAAGCTATGTCTGAACTATGTACTGTACTGATAATGGAAAATGGGGGGGGTGGGATTGTGATTGGGAAATGAATGAAGGGTTAGGATTAAATAGAAGAGGGAGAATGAATGGTTAGGATTTAAAGATGGGTGGGAAATCATTTCCCTTTCCCATTTGCCAAACTCTACCTGAAGTTACTGAATTTGGTCTTGTTGGTGGTGATGCAGGCTGATCCAGAATTCCGGCCGTCCATGTCGGAGGTGGTGCAGTCGCTCCTCCGCTGCGTGCAGCGCACCATCAGCAACAGGGGGATGGCCGGATACTTAAGCAACTCACAGCGGAGCGACATCTCCGATTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031258