BGIOSGA031293

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Revision as of 09:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031293, complete gene.| tag = OsI_324...")
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Gene Name

BGIOSGA031293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031293, complete gene.

LocusTag

OsI_32441

Ensembl Transcript ID

BGIOSGA031293-TA

Ensembl Protein ID

BGIOSGA031293-PA

Length

3866

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21485568..21489433

Sequence Coding Region

21485568..21485828,21485976..21486227,21486350..21486747,21486836..21487829,21488007..21488217
,21488323..21488557,21488682..21488804,21488998..21489118,21489224..21489433

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21485568..21489433 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21485568..21489433 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGTGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCATTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCGGCCTGAAATGCTGGCTAAGGATAGCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTTATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGAGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCACCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAG</cdnaseq>

Protein Sequence

<aaseq>MKSVAKDNDSDDSSQRLLATIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHERKAGTGTSEFGSGEPPDVENWKVVMTLRGHTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICTAVLRGHSSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFITTTHGFQKPRHSAPVLERGEWSATFDFLGHNAPVVVVKFNHSMFRKHLSSGQDAKAAPAGWANGASKASSKEHQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEAKELGYRLSDAELDELKKNRYGDVRGRQSNIAESPAQLLLEEASAKQSASKKVSSVQQFQSPPKVSTDAPNPSTSVPNQKAPEALPEDEKKTAGSTADDINKAPRLSSPVKQREYRRPDGRKRIIPEAVGFPSNQDMSNHSQNQGVDFSSLDQRMILGENGTRPSYSASGNCNNCGVRERSGITARTNISESLVIQKASAGAGSDGRLSIEQSGSVVPGSLASCSSLSIHVFNKKDNEDSLPVRLEAKPVERSAGDMIGLGGAFSTKETEITCTRGTETLWSDRISAKVTVLAGNANFWAVGCEDGCLQVYTKCGRRAMPAMMMGSAAVFIDCDECWKLLLVTRRGLMYIWDLYTRTCVLHDSLASLVTSPDEAAGKDTGTVKVISAKFSRCGSPLVVLASRHAFLYDTGLKCWLRIADDCFPASNFASSFSSTQGGELGKLQIDIGKFMARKPIWSRVTDDGVQTRSHLETQLAASLALKSPQEYRQCLLSYIRFLAREADESRLREVCESFLGPPMSMVDAASSADLKNPSWDPDVLGMKKHKLLREDILPSMATNRKVQRLLNEFMDLLSEYEAAETNVEQMDVTPTPPPPPPPAATEGNNNGAS</aaseq>

Gene Sequence

<dnaseqindica>1..261#409..660#783..1180#1269..2262#2440..2650#2756..2990#3115..3237#3431..3551#3657..3866#ATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTAATTATCTGCCAAAATCTCAGTCATGTCATGCTTAACATAATTAGATTTTAATCTGTCACCTGTTACTTAGATCTCTTACTAAAACTGTCATGATCCTTATCGATTCATTGTTGAACACAGTTATATTTCTTATGTGTAAAGTAGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGGTATGTTTTTGTTATATTGTTGTGTATTTGGACTTGGTCATTACATTTCTGTGGTTCACATATCTTGTTTGCAGAAAGCCTCCTTACTGAAAAATATTTTCTATGTGTGTGTGTGTTTGCAGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGTATGTGAATTTGACCATATAACATATTCTATAATTAGTATCCCGTGTATGTGCAAGCTCAATAGCAACTGCTCTTTTTCCCTGACAGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGTGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCATTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTATCTAATATCCCTTTAGTGGAATTCCTTGTAGATTTATTTCATGTTTTAGTTTGGAATAGTTACAAAATCTATCAATAATTGCTGGAATATGATTTTATTTATTCCTTCATGTGCATTCATTTTTCTGACAATCTGGTAGCCTAAACACTCGAATCAACTGGTCTAATTGTTCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTAAATATTTCATATGTAGTGTTAATCTGAACTTTTGTGCATCTAAATTGATGTTGACCAAAATGGCTTGTTCTTGCAAGTTGATCTTGCTTTGTTATATGACAGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCGGCCTGAAATGCTGGCTAAGGATAGCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTTATGGCTAGAAAGCCTATTTGGAGCAGGTTTGCACACTTCCATTGTTGCTCTTGTCTTATGAGCGTTTGAAACTAGAATCATGACATGCTAGTGTACTAACATAGCAGAATTTGCTCTAAATGTATACTTGTTTGACTGTTGGCACTACAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGGTTAGTTTGTTTATCAATTCAATACAATGGCTACAGAGTCTCCTTTTCTGAGGCTTAGCAACATTTCCTTTTTGCAACCTCAGCTCTATATGTTTAATTGGCTGAGAAAGTTTGTGATTCTTTTATATCTGATGAGAACAGTCTATGATGCTGTGCGGAAATGATTATATTGCTTGTTCTTTGTTTCGTTCAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGAGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGTAAGGCTCTCTGTCTGATAGATGGCCTGATAATTCTATGTTTTCTTGGACGTGATGTTTATTTACCACTTTGAGCCTGTGAACTCAAGTATGGTAAATCTGCAGGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCACCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031293