BGIOSGA031302

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Revision as of 09:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031302| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031302, complete gene.| tag = OJ1003_...")
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Gene Name

BGIOSGA031302

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031302, complete gene.

LocusTag

OJ1003_C09.27

Ensembl Transcript ID

BGIOSGA031302-TA

Ensembl Protein ID

BGIOSGA031302-PA

Length

4603

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21551370..21555972

Sequence Coding Region

21551370..21551697,21552195..21552319,21552607..21552719,21553352..21553736,21553850..21553981
,21554185..21554655,21554755..21555483,21555784..21555972

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21551370..21555972 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21551370..21555972 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTGGCAAGTGCTCGTTCTTCGTTGCCGTCGTCGTCGTCGTCACCATTGCCGCCCTTGTCGCCTCAGCCGGTAGTACCTACAGGCGTTGAGCGGATGTTGGTGCGCGCAGGCGGAGGAACCCGCAGCCTCAGAGAGATTGACGAGGAGGAAGATGACGACGACGATGACGGAGGAAAGACTTACGTGTCGGTCGGCAAGGACCTCAAGGACGGCAAGGCCAACATCCAGTGGGCAGCTAGGAAACTCCAGCCTCAGCAGGGTGATGTCAACAAGCTTCTTGTGCTGCTGCATGTCCACCAGCCTGCAGACAGAATCATGAGCGGCTTGTGTAAGGTTCCTGCAAAACAGCTAGAAGAAAAGGAGCTCAGAGCATACAGAAAGATTGAGAAGGACGATATGAATAAACTTTTAGAACAGTACCTGAGTTACTGCAGAGCATTTCCAAAGGTGCAAGCTGAAAAATTGGTGATTGAGAAGAACAGTGTTGCAAATGGCATTGTTGAGCTTATTGATCAACATCACATTACAAAGCTTGTTATGGGAACATCTTCCTTCTCAGTGGAAGCCAGTCAGTTTGCTGACAAAGGAGATTCCCCCAGAAGCAGCTCCGGGAGTTCTCTGTCAGATAAGTCTGAATTCCCTCCAAGATCAGTGTCGTTGCCGTCATGGTATTCAGGTTTCTTAGGCTCTCCAGATCAGCAATCGCTACCTCGGCGGTCCAATTCCATTAGTCATCCCTTTCCCTTTTCAAGACAATTAGAGAACGGCGTGGAAAATATATCACCTATAAGGCCAAACTCAGTCGACGTAGCACCAAAAGGTTGCTCCCCGAATTCCAGACATCAAAGCAAAGGTACCTCACCAACTCTGACAGATTTGGACACTGTGGATGGATTATCAGTACCTGTTTCAAGCTCAAGCTCCGAAGAGCATCAGCATTTCATGGTGGAAGCTAACATGCAGAATGAAATGTTTGAACAATGGCAGCAAGTTCGCAATGAGCTAGAACGGTCAAGAAAGGAAGCATCTGAGGGCCGACAGAAAGCCGAGAAAGAGCTGTTTGAAGCGTCTAAGATGTTTAGAGCACGGGAGAATTCACTCTGTAAAGAAAAAATTGCGGTAGAGGAAAGACTAACCAGAGAAAAGGTCAGTCTTGAAAAGGAGCACCTCCAGATCTACAATGAGCTGCAGAAGGCAAATGAGCAAATAATGGAACTGGAGAGAAAGCTTATGCATGCCAATTCTCTAATGGAAGAGCTCCAGACTGTGCAAGGAGAGCTGCAACGTCAGAAAGACAATGCTGTGAAAGAAGCTGAAAAGATGAGCCAAATAAACTGCAACAATGTATCTTGTTCTACTGGTGCTGTTGCCTTGACAGAGTTCACCTACACAGAGATTAAAGAAGCGACTAACGACTTTGATGAATCCAAAATGATCGGACATGGTGGATGTGGAAGTGTCTACAAAGGTTTTCTCCGTCATACCACTGTGGCTATAAAGAAATTCAACCGTGAAGGCATAACAGGAGAGAAAGAGTTCGATGATGAGGTAGAGATTCTGGGAAGGATGAGACATCCAAACCTTGTGACCCTGATAGGAGTGTGCAGGGAGGCCAAAGCTTTGGTCTATGAGTTCTTGCCAAACAGGAGCCTAGAGGACCGTTTGCAATGTAAACACCAAACAGATCCACTTCCATGGAGAATGAGGATCAAAATTGCTGCTGACATCTGCACAGCACTTATCTTCCTTCATTCCAACAAACCAAAAGGCATTGCCCATGGTGATCTGAAGCCTGATAATATTCTCCTTGGAGACAACTTTGTAGGCAAGCTAGGGGACTTTGGGATATCTCGTCCGTTGAATCTGACAAACACCACCATCACACCTTACCACCGAACAAACCAAATTAAAGGCACATTGGGATACATGGATCCAGGATACATTGCTTCAGGGGAGCTCACAGCACAGTATGATGTCTATTCATTTGGAGTAGTGCTGCTAAGATTGCTAACTGGCAAGAGTCCACTAGGCCTTCCTAGTGAGGTAGAGGCAGCCCTGAACAATGAAATGCTGCAACAGGTAGTTGATGCTTCTGCAGGGGAATGGCCACCTGAGTATAGTAAAAAGTTGGCAATCCTAGCACTGAGATGTTGCCGGTATGACAGAAAGGAGCGCCCTGATCTTGCCAAGGAGGCCTGGGGTGTTTTACAAGCCATGGTGAACTATCCAGACAACAAATGCAAGATACCATCATTTTTCATCTGCCCAATGACACAGGAAATCATGAAGGATCCACATATTGCTGCTGATGGATTCACATATGAAGGTGAGGCTATAAAAGACTGGCTTCAAAGGGGGCATAAGACGTCCCCCATGACCTACCTCAGTTTCACACACCACGAGCTGATTCCCAATAATGCCCTTCGTTTTGCCATTCAAGAGTGGCAAATGAAACAGCAACTATGA</cdnaseq>

Protein Sequence

<aaseq>MAVASARSSLPSSSSSPLPPLSPQPVVPTGVERMLVRAGGGTRSLREIDEEEDDDDDDGGKTYVSVGKDLKDGKANIQWAARKLQPQQGDVNKLLVLLHVHQPADRIMSGLCKVPAKQLEEKELRAYRKIEKDDMNKLLEQYLSYCRAFPKVQAEKLVIEKNSVANGIVELIDQHHITKLVMGTSSFSVEASQFADKGDSPRSSSGSSLSDKSEFPPRSVSLPSWYSGFLGSPDQQSLPRRSNSISHPFPFSRQLENGVENISPIRPNSVDVAPKGCSPNSRHQSKGTSPTLTDLDTVDGLSVPVSSSSSEEHQHFMVEANMQNEMFEQWQQVRNELERSRKEASEGRQKAEKELFEASKMFRARENSLCKEKIAVEERLTREKVSLEKEHLQIYNELQKANEQIMELERKLMHANSLMEELQTVQGELQRQKDNAVKEAEKMSQINCNNVSCSTGAVALTEFTYTEIKEATNDFDESKMIGHGGCGSVYKGFLRHTTVAIKKFNREGITGEKEFDDEVEILGRMRHPNLVTLIGVCREAKALVYEFLPNRSLEDRLQCKHQTDPLPWRMRIKIAADICTALIFLHSNKPKGIAHGDLKPDNILLGDNFVGKLGDFGISRPLNLTNTTITPYHRTNQIKGTLGYMDPGYIASGELTAQYDVYSFGVVLLRLLTGKSPLGLPSEVEAALNNEMLQQVVDASAGEWPPEYSKKLAILALRCCRYDRKERPDLAKEAWGVLQAMVNYPDNKCKIPSFFICPMTQEIMKDPHIAADGFTYEGEAIKDWLQRGHKTSPMTYLSFTHHELIPNNALRFAIQEWQMKQQL</aaseq>

Gene Sequence

<dnaseqindica>1..328#826..950#1238..1350#1983..2367#2481..2612#2816..3286#3386..4114#4415..4603#ATGGCCGTGGCAAGTGCTCGTTCTTCGTTGCCGTCGTCGTCGTCGTCACCATTGCCGCCCTTGTCGCCTCAGCCGGTAGTACCTACAGGCGTTGAGCGGATGTTGGTGCGCGCAGGCGGAGGAACCCGCAGCCTCAGAGAGATTGACGAGGAGGAAGATGACGACGACGATGACGGAGGAAAGACTTACGTGTCGGTCGGCAAGGACCTCAAGGACGGCAAGGCCAACATCCAGTGGGCAGCTAGGAAACTCCAGCCTCAGCAGGGTGATGTCAACAAGCTTCTTGTGCTGCTGCATGTCCACCAGCCTGCAGACAGAATCATGAGCGGTATATAATTTCTTTCCTTCTACTTGCCCTTTTCTTCTGTTATTATTAGTAAGTAGTAGCATTCAACAACACTAACAATATTACTAATATGATAACTAGTACCACGTAGCAGGCAACAACGGTTGTATTTCCATTTCCACAAATTGTTGTTTTTCTCTGCAACTTCTGGGAAAGACACCTTTGGTCTGTTCAATTGGGAAAGCAGCAGCACACACATTTTTTCTTTTCCATATGCCCTGCTTCTCAAGAGACTGTACCGCAGCTATCATACAAACAATGAACCTGAAAATAACCAAAGTGGTGTTCTGTCAATTAGATGTTATGCATTAACCCAAGTTGCTACCAGACATCTATTTTCTTAATAATCAGAAAATCTTCTATATTTCCCACAGAAAAAGGAAATAATACTTGTTTTAGTGTTACATGTTGCTCTGCCAAAAAAAAAAAGAAGTCCACGCCGGTGCTCATGGTTTCCTGCGATGATGCCATCCTTGCAGGCTTGTGTAAGGTTCCTGCAAAACAGCTAGAAGAAAAGGAGCTCAGAGCATACAGAAAGATTGAGAAGGACGATATGAATAAACTTTTAGAACAGTACCTGAGTTACTGCAGAGCATTTCCAAAGGTCAGATAAGCACTCTCACTCAAGTCATATGAAATGGGAATTTTATTTTTCAACAAAGTGAACTATGGTCAGCTTGAGGATCAATTTATGGAAAGATAACAATCAATATTTTAACCACATTTTGTACCAGGCCTAGACAAATTAAGCTTTATGACTAATTGTTCTGATGAAGTGGATTGAATAAGAACATCAAATTACAGAAATCTATGCAATATTTTATATCCTTTATGCTAATCAGAAGTTGCTTCCCATTCTATGTCATCTCAGCAAAATCACCAAATTTGCAGGTGCAAGCTGAAAAATTGGTGATTGAGAAGAACAGTGTTGCAAATGGCATTGTTGAGCTTATTGATCAACATCACATTACAAAGCTTGTTATGGGAACATCTTCCTTCTCAGTGTATGCCAAGATGCCCTTATTCCATTGTACTGAGGCCTCATCATGAATCACAACCACTGAGATATCTCTAGACTGAGCATATTGTAGTCCGTAGATGTGATTTTATTATTTGTCATGTTTGTGTCGCTCATTCTAACAAGTATTGATGACAAAGGCGTCAGGACCAACAAGCAAACACTTCTTGAACAATGCATTTTCCCCTTCCTAATACAACTCAGCAATTTACCTTTCTTGTATATTTCTTACTTAGCAAATGGCAAGCATAATATGACGTTAAACTACTGTTAACAAGCTAGGTTTTAATGGCTATCATCTTCTTGTCTAAACTAGAGACCAGATCCTCTAATTAGTGTATAATCTGAAAATTTCAATGTTGACCATGGGCATGAATCTTTCATGAACAGGAAGAGGCAAGTACCAAAATCAAAAGTTGCAGCAATTGTACATCAACAGGCCAAACCATATTGCCAGATCTTATATATTTGCAAAGAAGCTCTTGCTTGCACTAGGTATGAATGTTCATGCAGTCCTACCTAGTCTCCAACATAAATCCAATTCCACATTGAATTTACCATTTTGACAAACTTATTGTGATTGTAAAACAACGTTATTGTGATTGTTTACCATTTTAGGGAAGCCAGTCAGTTTGCTGACAAAGGAGATTCCCCCAGAAGCAGCTCCGGGAGTTCTCTGTCAGATAAGTCTGAATTCCCTCCAAGATCAGTGTCGTTGCCGTCATGGTATTCAGGTTTCTTAGGCTCTCCAGATCAGCAATCGCTACCTCGGCGGTCCAATTCCATTAGTCATCCCTTTCCCTTTTCAAGACAATTAGAGAACGGCGTGGAAAATATATCACCTATAAGGCCAAACTCAGTCGACGTAGCACCAAAAGGTTGCTCCCCGAATTCCAGACATCAAAGCAAAGGTACCTCACCAACTCTGACAGATTTGGACACTGTGGATGGATTATCAGTACCTGTTTCAAGCTCAAGCTCCGAAGAGCATCAGCATTTCATGGTAAGCTATATTGTACTGAAACAAATCTCTAGGGATACCTTCATGGATGCACCTTTTTTTTAAGTAAGGAAAGGACAACTACTGAATTCAGATCAAACCTTAATAATTTACAGGTGGAAGCTAACATGCAGAATGAAATGTTTGAACAATGGCAGCAAGTTCGCAATGAGCTAGAACGGTCAAGAAAGGAAGCATCTGAGGGCCGACAGAAAGCCGAGAAAGAGCTGTTTGAAGCGTCTAAGATGGTATGGTGTTTGTTATCCCCATATCCCTCTCATCATGAAGAATTTATGCTTAATCTACTGATTTTAGTACCTTTGGGCCTCAAAATACGTCGTATTTTGAAAGATGCACAAATGTGTTAGTGAAATACGTACATACAGTTTTTACTACATGATAGATGAGTCTCTCAACTTTATATCGAAATTGCAAACCATTTTTTTTGCAGTTTAGAGCACGGGAGAATTCACTCTGTAAAGAAAAAATTGCGGTAGAGGAAAGACTAACCAGAGAAAAGGTCAGTCTTGAAAAGGAGCACCTCCAGATCTACAATGAGCTGCAGAAGGCAAATGAGCAAATAATGGAACTGGAGAGAAAGCTTATGCATGCCAATTCTCTAATGGAAGAGCTCCAGACTGTGCAAGGAGAGCTGCAACGTCAGAAAGACAATGCTGTGAAAGAAGCTGAAAAGATGAGCCAAATAAACTGCAACAATGTATCTTGTTCTACTGGTGCTGTTGCCTTGACAGAGTTCACCTACACAGAGATTAAAGAAGCGACTAACGACTTTGATGAATCCAAAATGATCGGACATGGTGGATGTGGAAGTGTCTACAAAGGTTTTCTCCGTCATACCACTGTGGCTATAAAGAAATTCAACCGTGAAGGCATAACAGGAGAGAAAGAGTTCGATGATGAGGTATTTTTCACCAATCCTTCTAACTTATGGCTATATATTTACATGAGAAAGAGAGTAAAAAACTTTATATAAATATGTGATTTTGCCAATACATTACAGGTAGAGATTCTGGGAAGGATGAGACATCCAAACCTTGTGACCCTGATAGGAGTGTGCAGGGAGGCCAAAGCTTTGGTCTATGAGTTCTTGCCAAACAGGAGCCTAGAGGACCGTTTGCAATGTAAACACCAAACAGATCCACTTCCATGGAGAATGAGGATCAAAATTGCTGCTGACATCTGCACAGCACTTATCTTCCTTCATTCCAACAAACCAAAAGGCATTGCCCATGGTGATCTGAAGCCTGATAATATTCTCCTTGGAGACAACTTTGTAGGCAAGCTAGGGGACTTTGGGATATCTCGTCCGTTGAATCTGACAAACACCACCATCACACCTTACCACCGAACAAACCAAATTAAAGGCACATTGGGATACATGGATCCAGGATACATTGCTTCAGGGGAGCTCACAGCACAGTATGATGTCTATTCATTTGGAGTAGTGCTGCTAAGATTGCTAACTGGCAAGAGTCCACTAGGCCTTCCTAGTGAGGTAGAGGCAGCCCTGAACAATGAAATGCTGCAACAGGTAGTTGATGCTTCTGCAGGGGAATGGCCACCTGAGTATAGTAAAAAGTTGGCAATCCTAGCACTGAGATGTTGCCGGTATGACAGAAAGGAGCGCCCTGATCTTGCCAAGGAGGCCTGGGGTGTTTTACAAGCCATGGTGAACTATCCAGACAACAAATGCAAGATACCATCATTTTTCATCTGCCCAATGACACAGGTCAGTTACATCATGAGACAGTAGATTAATAGAAATTTCAAAGCATCTCTACCACTGTATATCTATTGCATAAACAATATTAAGCACCAGCACAAATAGAGCACATGAGAAATTACTCTATTGATGGTCAACATGGATAACAAATCAAAGAAATTAAGCACTCAAATCGTGTGATGGCTTATGCCAAACCAACAACTCTTCGCGTTCGCCAAATCTATTATCAGTATCATCATCACCTTCTCCTGAATTTATGTTTTTACTTTTAATTTGAAATAATCTAGCATCTTTTGAATATTTCAGGAAATCATGAAGGATCCACATATTGCTGCTGATGGATTCACATATGAAGGTGAGGCTATAAAAGACTGGCTTCAAAGGGGGCATAAGACGTCCCCCATGACCTACCTCAGTTTCACACACCACGAGCTGATTCCCAATAATGCCCTTCGTTTTGCCATTCAAGAGTGGCAAATGAAACAGCAACTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031302