BGIOSGA031320

From RiceWiki
Revision as of 09:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031320| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031320, complete gene.| tag = OS09G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031320

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031320, complete gene.

LocusTag

OS09G0573200

Ensembl Transcript ID

BGIOSGA031320-TA

Ensembl Protein ID

BGIOSGA031320-PA

Length

4706

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21744385..21749090

Sequence Coding Region

21744385..21744945,21745029..21745235,21745332..21745547,21747129..21747195,21747285..21747431
,21747565..21747656,21748211..21748396,21748486..21748622,21748850..21749090

Genome Context

<gbrowseImage1> name=IndicaChromosome09:21744385..21749090 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:21744385..21749090 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCGCCGCACCAAGTTGTAGCTCCCCAACCCCAATCCCAAGCCCAAGCAGGTGGCGGCGGCGGCGGCGGCGGTGGCGGGACGGCCGAGCAGTTCTGGTCGCTGCTGGACAAGGCAGACCGGCGCTTCGCCCGCGTGCGCGACCTCCCCCTCTTCGGCCGCCGGGAGCCCGATGAATACGGCAAGGCCTTCCGCATCTACACCCAGCTGTGGCGCATGCAGCAGGAGCACCGTCACCGTCTCCTCGACGCCGGGCTCCGCCGATGGCAGGTCGGTGAGATCGCCGCCCGCATCGCTCACCTCTACTACTCCCAGTACCAGCGCACCTCGGACACCGCCCTCCTCTCCGAGGCCTTCGTCTTCTACCACGCCGTCCTCGACCGCGGCTACTTCCTCGCCGACGCCGCCGACCATCTCTTTGCCCCCACCAAGCACCTCCGCTTCCTCGCCAGGTTCCTCCTCGTTGCGCTTCTACTCGCCAGGCGCGCCGACACTGTCCCTCGCCTCACCACCCACATCCGCACGCTCCTCGACGACTCCAAGAAGACCCTCCAAGAAGCCGACTACAAGGAGTGGAAGCACGTCGTCCAAGAAATCGCGAGGTTTCTCAGAGCTGACTCCCCCTTTATCAACATGAGACCACTCAGGTACAGCTACGCATTTGATCCTCCCCCTGATACTCTTCCTACCGTCCCACCTACTGTCAAGAAGCGAGGTCTGGTCTTAAGTGATGCCATGCTATGCAGCTACTATCAAAACGAGATCAAATTTACAGACCTCACCATAGATGTTTTCAGAATGCTTCAATGCCTCGAATGGGAACCATGCGGTTCTTTTGCACTAACCAATGGTTACAGTACCCGCGATGAAAGTGGACAAAATCATCCCAATCTCTTAAAAGATCTGAGAGATGCTGCGCTGCCTCCAAACCCACTTAAAACAATTCTCTATCGTCCCTCAGTGACTCATTTCCTAACAGTCCTTGCCACCAAATGTGAGGAGCTCCCGTCAAATGGTATGATGTTAATATACCTTTCAGCTGCAGGCGAGGTGGGATCTTCTGGATTTTGCCCTGATACAAATGAGATGGTTGTGAGCAGCTTGAATAAGTTTGATATATCTAATACTAGTACCATCAATGTAAATGAAGACAATGGACCTCGTCTATGGCTAGGCTGCCGTGAAGGTGAAGGTTCAAACTGTATATACCCTTGTGATCTGATTCCATTTACAAGAAGACCACTCTTTTTGGTGATCGACAGCAATGCCAGCTATTCATTCAAGTCAATTCATGGGTTTGAAAAAGGGGAGACAACGGCCATGTTACTTTCTCCAAGTTGCCGATCTTCCTCGGCAGGATTCAGTGGGGATTCTGTACGGCAGATTGGCAGTCAATTTACTATGTTTCTCACAGCTCCATTGCAAGCTTTCTGCCATCTGATTGGCAATAATGGGGTCGACATTGATAGGGATACCTATAACAAAGCTGAAGAGTTACTATCATTGTCCTTAAATGAATGGGCCACTACTTTGGTTGCATCATCTTCACTTCATCCTGTTTGGGTTGAAGTTTTAGGCGATCCACTCTTGAGGCGGCTTCTTCTCAGGTTTATATTCTGCAGAGCTGCGCATTCGATCTTCAAACCTACGTACCATAAGGTGGACTTCCTCCCAACTTGCACACCTCCTTTGCCAGAGTCGGTTGATGCAGAGAGCATGCTTTCCCAATGCTGCCTGTTGCGAGTTGCATCTTTCTTTGGCGCCACCAACCAATTCTCATTTTCTGAGGTAACCACATGGCCTGAGGTTGATGTTGAGGAGGCTGCTGTCGTCAACCCCTCGATCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSPHQVVAPQPQSQAQAGGGGGGGGGGTAEQFWSLLDKADRRFARVRDLPLFGRREPDEYGKAFRIYTQLWRMQQEHRHRLLDAGLRRWQVGEIAARIAHLYYSQYQRTSDTALLSEAFVFYHAVLDRGYFLADAADHLFAPTKHLRFLARFLLVALLLARRADTVPRLTTHIRTLLDDSKKTLQEADYKEWKHVVQEIARFLRADSPFINMRPLRYSYAFDPPPDTLPTVPPTVKKRGLVLSDAMLCSYYQNEIKFTDLTIDVFRMLQCLEWEPCGSFALTNGYSTRDESGQNHPNLLKDLRDAALPPNPLKTILYRPSVTHFLTVLATKCEELPSNGMMLIYLSAAGEVGSSGFCPDTNEMVVSSLNKFDISNTSTINVNEDNGPRLWLGCREGEGSNCIYPCDLIPFTRRPLFLVIDSNASYSFKSIHGFEKGETTAMLLSPSCRSSSAGFSGDSVRQIGSQFTMFLTAPLQAFCHLIGNNGVDIDRDTYNKAEELLSLSLNEWATTLVASSSLHPVWVEVLGDPLLRRLLLRFIFCRAAHSIFKPTYHKVDFLPTCTPPLPESVDAESMLSQCCLLRVASFFGATNQFSFSEVTTWPEVDVEEAAVVNPSI</aaseq>

Gene Sequence

<dnaseqindica>1..561#645..851#948..1163#2745..2811#2901..3047#3181..3272#3827..4012#4102..4238#4466..4706#ATGGCGTCGTCGCCGCACCAAGTTGTAGCTCCCCAACCCCAATCCCAAGCCCAAGCAGGTGGCGGCGGCGGCGGCGGCGGTGGCGGGACGGCCGAGCAGTTCTGGTCGCTGCTGGACAAGGCAGACCGGCGCTTCGCCCGCGTGCGCGACCTCCCCCTCTTCGGCCGCCGGGAGCCCGATGAATACGGCAAGGCCTTCCGCATCTACACCCAGCTGTGGCGCATGCAGCAGGAGCACCGTCACCGTCTCCTCGACGCCGGGCTCCGCCGATGGCAGGTCGGTGAGATCGCCGCCCGCATCGCTCACCTCTACTACTCCCAGTACCAGCGCACCTCGGACACCGCCCTCCTCTCCGAGGCCTTCGTCTTCTACCACGCCGTCCTCGACCGCGGCTACTTCCTCGCCGACGCCGCCGACCATCTCTTTGCCCCCACCAAGCACCTCCGCTTCCTCGCCAGGTTCCTCCTCGTTGCGCTTCTACTCGCCAGGCGCGCCGACACTGTCCCTCGCCTCACCACCCACATCCGCACGCTCCTCGACGACTCCAAGAAGACCCTCCAAGTATCTATGATTCGATTCGATTCCACTGCTTCTTTGATCCCACATCAAATCTTGCTCGGCCTTCTCATCTTGCTTGCTTGCAGGAAGCCGACTACAAGGAGTGGAAGCACGTCGTCCAAGAAATCGCGAGGTTTCTCAGAGCTGACTCCCCCTTTATCAACATGAGACCACTCAGGTACAGCTACGCATTTGATCCTCCCCCTGATACTCTTCCTACCGTCCCACCTACTGTCAAGAAGCGAGGTCTGGTCTTAAGTGATGCCATGCTATGCAGCTACTATCAAAACGAGGTAGGGTAATGCTTCCTCTGTCTCACCTTCTCTTTTTTCTGTTTTTAACACAACAAAAATAATGAGGAGTTGCCTCGCTATGTTTGTTCCACTCAGATCAAATTTACAGACCTCACCATAGATGTTTTCAGAATGCTTCAATGCCTCGAATGGGAACCATGCGGTTCTTTTGCACTAACCAATGGTTACAGTACCCGCGATGAAAGTGGACAAAATCATCCCAATCTCTTAAAAGATCTGAGAGATGCTGCGCTGCCTCCAAACCCACTTAAAACAATTCTCTATCGTCCCTCAGTGACTCATTTCCTAACAGTAAGTCTCTTCTTCCTCATTTGATGCTTGACTTACTGTCTTATCCTATGATTTAGTGAATGCATGCAATCTTAAAATGTATTTCATACACCATAGTTATCTACTAGTATAATCATCAGAGATTGAAAAAAAAAGGGAAATCACTATGGTAGACAGTTACCATATGAAGAAGTTTTTGGTGCTTGCATGTTACTACTCCCCTGAAAAATAATATTGGCAATTGACACATTTCTGCTGCATTTAGTTCACCTTAAGATGAGCTAGTTTAACTTGTTGGATGTTTCAGTAATGGGCTAGTATAACAATTGACAACGTAGGAAATTCCATGAGAAAAAAACTATATTACTAGTATTAACTAATTGATTTAATTATTCTGACAAGAAAGCATGCCAATGATCTTCTTGATTCCTCCCGAGTTCATGACATGAGGTTCAAATGCACAATGAATCTGCTTGGTGGCATACATCTGATTGTCTAATGTCTACACCAATAATATTGGTATTAATGGACCAGTAAACTTTTGACGACAAAACTACTCTTTTGGTAACCATTTCGGAGAACCACACCACTAACTATTGTTATTGCATAACAACAAGGAACCATGCTTCTTGTGGACATGATGACTTGGACCTACATGGTAACAACATAATCCTGTCTGACCCATCACATGGACATTGACTTCCACACCCACTGGCTGGCAGTAGGTATCACTTGTATATACTTGACTTCCATACCACACTGGTAGCAATAGGCATACCACTTGTCTATACTTGGAAGGGAGAGGGATGAGACTATTTGATTTCTGCTTTGTGTTGTGCGTGAAGTGGCTAGGTGAGGAGAGCCAAGATTCATCTGTTTCTTGCATTTGGTTTTCTTATTCATCACATAGATCATGTTTGTTATCCCTTTTGTTTAACAATTAGTTACATCGTTGCAAGCCTTATAAGACCAAGCAATCCACGGAATAAAGCAAGCTGAGATTAATCTGTAAACTCTATCCTCTCTCTCTCTCTCTCTATGACATGACGGCTCTGGGCAAGCAAGGTCCTCCAGTCGAGCATGGGTATGCGTTACGCAGCTTGGGGCCACCTCCAAGCCATAACATCTGTTCAGTGTATTGTTTCTTGTTTGGAATTTCTTTCATACCATGGTTCTATATTAGTTAACAAAAAAATAAAATAAAAATAAAAAACTTTCTAGATTGACTACATCCTGTCCACCTATATTTAATAGGGATTATTGAAATTTTTGGACTGCTTTACACAACTCCCTTGTATATTATAATTCCTTTTTATTTAACATGGATAATAGAGGGCTACATGTTTTTGTTAATCATATATTATCTTGTATCGTATGCTACCTCTCCATTCATGAATAGTTGTTGATTTTGACTTAAATGGATATGATTTTGTGTTTATCTTTAGGCAATATAAAATAAATAGCTCTAATTGTAGAATATTGTAGTACATTTGATTATAAATCTTCCTATACCACTTTGATGCAAAATAGTTATACAACCAGGAAATTATTGTTGGTCAAAGCATGATCAGTCAATTGTTATATGTTATGTTTGTAATCTAGGTCCTTGCCACCAAATGTGAGGAGCTCCCGTCAAATGGTATGATGTTAATATACCTTTCAGCTGCAGGTAGGTGCTGTAGGCATTTAACTAAAATGTTATTTGTAATATATTGTCTGTTGGGAGCACATTCCGATCAACACTCTATTATCTTTCAGGCGAGGTGGGATCTTCTGGATTTTGCCCTGATACAAATGAGATGGTTGTGAGCAGCTTGAATAAGTTTGATATATCTAATACTAGTACCATCAATGTAAATGAAGACAATGGACCTCGTCTATGGCTAGGCTGCCGTGAAGGTGAAGGTATATTCACAATGCTGGCTTAATTAGATTATCTTCTTGGTTAGGTTTATGGCATCCTTGAAGTTGCCCTTACATGGACTCAACTTTCCTAGAAAGAAGTATGTTATTTCTGACACATGTTCAAAACATCTAGGTTCAAACTGTATATACCCTTGTGATCTGATTCCATTTACAAGAAGACCACTCTTTTTGGTGATCGACAGCAATGCCAGCTATTCATTCAAGGCAGGTTTGTTTAATCTTATTTTTTTATCCCAAGCAACCATCATTATTCAATACTACCTCCGTCCTAAAATATAACAACCTAGTACATGATTAGACATAATCTAGTACAACGAATATGGATAGAAATATTTTGAGACGGAGGGAGTATTTGTTATGGGTCACTTATATTAATTTATTCTGGCTAGTGCGGGACTGAAGACTGAAGAATATTTCTTTAGTGGGTTATCCATGAGTGACGAACAGTTTTACTGAATCCTGTAATGCTTTTTGAGAGAAAGCACATGTGCTTGGATCTGCACATAGACAGGCTTATAGTTTTTGTAATTTTTTAGGTTGAAGCTTTTCTCAGTTTACTTCTGTGTAAAATCATGCATTATACTTATCCAAGTGCCATTCTATTGGCATTCCTCATTTTACTTTTGACTATGCACCTCTTAGATTACGAAGGAATACATCATATTTTTACTGTAGGCTGCTGGTTGGCATCATGCCATTTATTGTTAGTGCTGTCAGTACGTTGATCCCCTCTAATTTTTTCAAATTAAGCATTGCAGTCAATTCATGGGTTTGAAAAAGGGGAGACAACGGCCATGTTACTTTCTCCAAGTTGCCGATCTTCCTCGGCAGGATTCAGTGGGGATTCTGTACGGCAGATTGGCAGTCAATTTACTATGTTTCTCACAGCTCCATTGCAAGCTTTCTGCCATCTGATTGGCAATAATGGGGTCGACATTGATAGGGTACTTGCTTTTAGTTTTTGTTAACAATTTTCTCTCTCAGAGCAAGAGAAGTTTTTTTTATATTGAGCTTTGACATAAACTTTTTTTAGGATACCTATAACAAAGCTGAAGAGTTACTATCATTGTCCTTAAATGAATGGGCCACTACTTTGGTTGCATCATCTTCACTTCATCCTGTTTGGGTTGAAGTTTTAGGCGATCCACTCTTGAGGCGGCTTCTTCTCAGGTCACCTTCCAACCTTTTGCATGAGTTCTGTATGGACATCAACTTTAACATGATTCTTATCTACTAATTTCTCAATAATGAGCGTATGTTCACTTTATAAGCTGTTCCCCTCATACTGTGTTGAGCTAATATTCCTTATATTCTGCGTAATGTAAGCTGTTCCCTGATATGCATACTTGATATGCCAACGTGTAGCATTTTAAAGCTCATTTCGGTTGTTTTTGCAGGTTTATATTCTGCAGAGCTGCGCATTCGATCTTCAAACCTACGTACCATAAGGTGGACTTCCTCCCAACTTGCACACCTCCTTTGCCAGAGTCGGTTGATGCAGAGAGCATGCTTTCCCAATGCTGCCTGTTGCGAGTTGCATCTTTCTTTGGCGCCACCAACCAATTCTCATTTTCTGAGGTAACCACATGGCCTGAGGTTGATGTTGAGGAGGCTGCTGTCGTCAACCCCTCGATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031320