Os10g0566900

From RiceWiki
Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0566900| Description = Conserved hypothetical protein| Version = NM_001071960.1 GI:115483515 GeneID:4349428| Length = 2190 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0566900

Description

Conserved hypothetical protein

Version

NM_001071960.1 GI:115483515 GeneID:4349428

Length

2190 bp

Definition

Oryza sativa Japonica Group Os10g0566900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22919639..22921828

Sequence Coding Region

22919785..22919916,22920387..22920505,22920613..22920789,22921096..22921143,22921303..22921367
,22921465..22921508

Expression

GEO Profiles:Os10g0566900

Genome Context

<gbrowseImage1> name=NC_008403:22919639..22921828 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22919639..22921828 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgtcggtgcggagggtgcagcagcgggtgaggaaggcgcgggaggagatggatcggtgggacgacctcaactcccgcctcctctctcagttcgcaaacgctgccgccatcgttgctcgtctcccggtgctggaagaggttaagaactatggtgtcctacgatgtgtccctaacatcagagagaatcttttgggtaagcaaatggagagtttggagatcatcttcgtctctatgagggagacagtggaggaattcaatagcattgccagatctttacataaggctttgcgggatactaatcaaatggtgagaggtgggtctgcactcagtgcaaaacagatgcagttacaagtgggaattttgccaactatagcagactgcttggatgggctacggactttatgtgaaatgcaccaggccgagtatgcactaaaatcatcagtcatctcttcgctgacatggacgagcagttccagtgacattgccgcgatgcgtcaactcttagtagaccagccaaacataccaaaagatgaagtgcaagctatttttgacattatattcgcagatgaaatctgttga</cdnaseq>

Protein Sequence

<aaseq>MESSVRRVQQRVRKAREEMDRWDDLNSRLLSQFANAAAIVARLP VLEEVKNYGVLRCVPNIRENLLGKQMESLEIIFVSMRETVEEFNSIARSLHKALRDTN QMVRGGSALSAKQMQLQVGILPTIADCLDGLRTLCEMHQAEYALKSSVISSLTWTSSS SDIAAMRQLLVDQPNIPKDEVQAIFDIIFADEIC</aaseq>

Gene Sequence

<dnaseqindica>147..278#749..867#975..1151#1458..1505#1665..1729#1827..1870#gagcaggagacccctcccgccgttcggagctcggacgctttctcgccgctgctcaccttccgttccctccccttccacgcgccgccgccgccgattctttgctccgtttggcggccgctgggccgtacgggagggggtgggactggatggagtcgtcggtgcggagggtgcagcagcgggtgaggaaggcgcgggaggagatggatcggtgggacgacctcaactcccgcctcctctctcagttcgcaaacgctgccgccatcgttgctcgtctcccggtatcctcttcctctcttctctgcaaaaaaagatatatccccttttggtggtttggagtacagttttactgtggttgtagagaaacaacactactcggtgtggcagcaattcttttctttttctttattttgacacggcagcaattcttttgttgacaaagaaatttaatggacatgtaacaagcatttagttttgtggtagcatcatgcattggggggcagatttcactaatgtaatgaaattacagattcagttagttttccccctcggataactgcagcaagttcagggctttcagctagtgctgacaggaccacttctagtattttccacctgcaagttttttcaagctagatggtcggttgctcatgaaaaacatatcaattgataatttggtagacacactgtaattctagtgagcagtaaatgcattgtgatattagctgcgtgacaaatcatatgttaaaaggtgctggaagaggttaagaactatggtgtcctacgatgtgtccctaacatcagagagaatcttttgggtaagcaaatggagagtttggagatcatcttcgtctctatgagggagacagtgtaagtggctttgctgctgttgcaatcccttttagtttcggtgtgacactagaagcagacggagaaaaaaaaattgatctgacgttgctgctgttgctattgttcagggaggaattcaatagcattgccagatctttacataaggctttgcgggatactaatcaaatggtgagaggtgggtctgcactcagtgcaaaacagatgcagttacaagtgggaattttgccaactatagcagactgcttggatgggctacggactttatgtgaaatgcaccaggccgagtaatgacctaaagaagacccccccccccccccctttttttttgctgttgtgaagctcattgtactgaacctcatccattatagttgaatcaaaattaaaccaaccttatggccgtcttacatatatgcaacaccccaagcactgttttccatttcaccaatactgacttcagttgcagcacttagtttgctatcatcatatattaagatgctctttattctgacgctgcacatattactttttttttctgtactgaagccactccgtgttgcggtcctctgaattgcctaaattccatttgacaggtatgcactaaaatcatcagtcatctcttcgctgacatggacgagcaggtaaaagttcaactatttgtttcaccaaacatctatattcctatctgtgtgctctgtatggagttctgtatctgcttttagtttatccctgaattatcaattcagacatgtttgtcagtcttcactaacttgaatgcccatggtgctctttctttgcagttccagtgacattgccgcgatgcgtcaactcttagtagaccagccaaacataccaaaagatgaaggtaaggaatgaaagaagagagaactaaagttgtcaattaaggtttctagctatccaatttatgaggctgacagttacattccaatcttgttttgcagtgcaagctatttttgacattatattcgcagatgaaatctgttgatgtacttgcacgattgctattggaagcactatgccctggagtcctggacatgttgacatcattatgttttgatgtacttgcatgcccagatggccagatgaaccaaagatgctgatgcactgtaacaaagctggaattgctgtgtctggctgccagcaagagagtaggatgtaggagtagctttctaacatacactaaaatatcttccctttttttatccccaaattttcctagttctatgttaacagtcatgtcctggagactaaaatttatctttgactgaatgcacattttcatgtcctggagactataatttatct</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0566900, RefSeq:Os10g0566900