BGIOSGA031328

From RiceWiki
Revision as of 04:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031328| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031328, complete gene.| tag = CPCT| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031328

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031328, complete gene.

LocusTag

CPCT

Ensembl Transcript ID

BGIOSGA031328-TA

Ensembl Protein ID

BGIOSGA031328-PA

Length

2051

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22145750..22147800

Sequence Coding Region

22147616..22147800,22147362..22147475,22146796..22146891,22146647..22146689,22146403..22146558
,22146198..22146266,22145968..22146078,22145750..22145845

Genome Context

<gbrowseImage1> name=IndicaChromosome10:22145750..22147800 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:22145750..22147800 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAGATTTAGGCGTAAGCTATGTTAAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCCGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MARVSHSRKRTRAPSNSNSKPTSQTQPPPPELTDRPVRVYADGIFDLFHFGHARALEQAKLLFPNTYLLVGCCNDELTNRYKGKTVMTQDERYESLRHCKWVDEVIPDAPWVLTQEFIDKHQIDYVAHDALPYADTSGAANDVYEFVKKIGKFKETKRTDGVSTSDLIMRILKDYNQYVMRNLARGYTRKDLGVSYVKEKQLQVNMKINKLRETVKAHQEKLQTVAKTAGINHEEWLANADRWVAGFLEKFEEHCHNMETAIKGRIQEKLRRQTSRGIIGGLMQQPVAA</aaseq>

Gene Sequence

<dnaseqindica>1..185#326..439#910..1005#1112..1154#1243..1398#1535..1603#1723..1833#1956..2051#ATGGCGCGCGTTTCGCATTCCAGAAAGCGGACTAGGGCTCCCTCCAACTCCAACTCCAAGCCCACTTCACAAACCCAACCGCCGCCGCCGGAGCTCACCGACCGCCCTGTCCGCGTCTACGCCGACGGCATCTTCGATCTCTTCCACTTCGGCCATGCCCGCGCCCTCGAGCAGGCCAAGTTGCTGTCAGTTTCTCTCTCTTCTCTTCTTTACATTACATTACATGGATCCCCCCGATCGATTTCTCTTGGATCTGGGCCTCTATGTTAGAATAGATCGAGAGATCTGTTCAATTCCAATTCCTGATTGCTCATGGCGATCGCAGGTTCCCCAACACGTACCTGCTAGTGGGCTGCTGCAACGACGAGCTCACCAACCGCTACAAGGGCAAGACCGTCATGACCCAGGATGAGCGATACGAGTCCCTTCGCCACTGCAAGTCCGTCTCCTTCCTTCCTTCTTCACCTTACCACATACGTACATGGATTTTCATCAACTGCTCTTACTGGATTCTAGTATTACATATCAATATATATGCAACAACTGCATTTGCATTGGATTGGACTAGACTCCTTAATCACACGTAGAGAACAGAATTGGATTACAGCACACAAGGAAGCCACCAACGTTTCTATTTCCCTTTCCTAGCCACAATATTATGCTCGCGGCTTGAGTCTCCCTTCTGCTGTGCTCTTTGCAAACTACATTTCTGGATTAACTTATTTCAAGGGGCCTCTTAATCTTTAATTTAGTGCTGTAAATTTAGGTTCCATAATTACTTCTCACCTTGCTCCTCTCAGCTACTTTCATAGCTCCACTGATCCTGGAAATTTTTTTACATCAGTCAATTTTTTTCCTTCCCTCTTGTGTTGTGCTGATATCAAGCTTCATTATTGTCTGCCTTCTTAGATGGGTTGATGAGGTCATTCCTGATGCTCCATGGGTCCTCACGCAAGAGTTCATTGACAAACATCAGATTGACTATGTTGCTCATGATGCACTGCCGTAAGTTTCAGCAGCACACCAACTATTATCGAATTCCCATTTTTTGTCCCTTTAATACTGTGCTCTTTCAGCTTAACTGACCGGAGTTCCTTTTTTTTTGCCACAGTTATGCCGATACTAGTGGAGCTGCTAATGATGTCTATGAATTTGTAAGTCAGAGTAGCTATATTTGCTACTAGTAACTACAGATATTTCTCTTGCATTGCTCCTTACTGATGGCTGTCTTCATGTACTTAGGTTAAAAAGATTGGCAAATTCAAGGAAACGAAACGGACAGACGGTGTATCCACATCAGACCTCATAATGAGGATATTGAAGGACTACAATCAGTATGTCATGAGGAATTTAGCACGTGGATACACAAGGAAAGATTTAGGCGTAAGCTATGTTAAGGTTAGTCTCATCTCTGTGTNGGTTTACCTTCATCTTCTTGCAGACAAATTCAGATGCATNTTTATTATTTGCATGGTTTCGCTGCTTTAGCAAGTATGACATGCTTGTTTATGGGTTCTTACTATCATTCTATCAGGAAAAGCAACTCCAGGTCAACATGAAGATAAATAAACTGCGAGAGACTGTAAAGGCGCATCAAGAAAAGGTAAACCATGCATGTGACTCTAAGATATTTCTGCTGTGTCACATGGAAGGACAGGGAGTTCCCCTTGTGTTTACGACTTTACAGATATCCTGACCCGCTGGGTAAATTATTTGGTGCAGTTGCAAACGGTGGCGAAGACAGCTGGAATAAATCATGAAGAATGGTTGGCCAATGCAGATCGCTGGGTTGCTGGTTTCTTGGAGAAGTTTGAGGAACACTGCCACAACATGGTAAGTTTATACATGAAACTTGAGACAAGGTTGCCGAGAATTCGTCGACAGCCAGATTGAGGGTAAAATGCAAAATTATTTGGACGTGGTACCCAACACTGATTCCTCGTTGGTATGGTCAGGAAACTGCCATCAAGGGGCGTATCCAGGAGAAATTGAGGAGGCAAACAAGCCGAGGGATAATTGGGGGTCTAATGCAGCAACCGGTGGCAGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031328