BGIOSGA031346

From RiceWiki
Revision as of 04:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031346, complete gene.| tag = OsI_347...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031346, complete gene.

LocusTag

OsI_34760

Ensembl Transcript ID

BGIOSGA031346-TA

Ensembl Protein ID

BGIOSGA031346-PA

Length

3549

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21894003..21897551

Sequence Coding Region

21897471..21897551,21897124..21897242,21895904..21896333,21895454..21895714,21894994..21895050
,21894579..21894701,21894183..21894284,21894003..21894110

Genome Context

<gbrowseImage1> name=IndicaChromosome10:21894003..21897551 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:21894003..21897551 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGACTCCTCCTCCTCCGCTGCCGCCGATAAGAACACCGTCTTCCGCAAGCTCCGCGCCAAATCAGACAACAAGATGTGCTTCGACTGCAACGCCAAGAACCCGACCTGGGCCTCCGTCACCTACGGCGTCTTCCTCTGCATCGACTGCTCTGCCGTCCACCGTAGCCTCGGCGTTCACGTCTCCTTCGTCAGGTCAACAAATTTGGATTCGTGGACCCCAGAACAATTGAAAATGATGGTTTATGGAGGTAACAACCGTGCACAAGCTTTCTTCAAGCAGCATGGTTGGACAGATGGTGGAAAAATTGAAGCAAAGTATACTTCAAGAGCTGCTGACTTATACCGGCAGTTGCTCGCTAAGGATGTTGCTAAAAATTCCACTGAAGATGGGAACAACAGTTGGCCGTCCTCCCCAGTTGCAGCTTCACAACCTACAAATCAAGCTGATGCAATTCCAGATCTTAAGCTGGCAGAGGCATCTAAAGAAGTTGCAAATGAGAAGACTGAGCCTGAGGTTATTCGTTCACCAAGGGCTCCAACTCATTCTTTCAAGAAGCCAATTGTTGCGAAGAAGCCTGGAAATAAGACCGGTGGACTTGGTGCACGGAAACTTACGTCAAAGCCAAATGAAAGTCTCTATGAGCAGAAGCCTGAAGAGCTAGCTCCTGCGCTGCCACCAGTGACTGAGAACAGTACAGCAAAGAGCAAATCTCATACTTCACGATTTGAATATGTGGAAAATACACCTTCTGCTGGGAGCAATTCAGAAGAAAACCAGGTCATTGGACATGTTGCGCCCCCAAAATCTTCAAACTTCTTTGGCGAATTTGGGATGGACAGTGGATATCACAAAAAATCTGCCCCTGGCCCATCCAAAGTGCAGGCATGCTACACTCCACACAAAGCTTTTCTGCTAACAAACAATTGGCTACTAATACTTATTGAAGAAAGTAGTGAAGCAAGACAGAAGTTTTCAAATGCAAAGTCAATTTCATCTTCTCAGTTTTTTGGAGACCAGGCCAGTTTTGAAAAGGAGGCTCAAGTTTCCCTCCAAAAGTTTTCGGGATCTTCTGCCATTTCAAGTGCTGATCTATTTGGTCATCCAACCAATAGTTCCAACGTGGATCTGAGTGCTTCAGATTTGATCAACCGGCTTTCTTTCCAGGCTTCCCAGGATCTGTCTTCTATCAAGAACATGGCTGGGGAAACTGGGAAGAAGTTGACATCTTTGGCATCGAACATCATGTCTGATCTTCAAGACCGGATCCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MATDSSSSAAADKNTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLLAKDVAKNSTEDGNNSWPSSPVAASQPTNQADAIPDLKLAEASKEVANEKTEPEVIRSPRAPTHSFKKPIVAKKPGNKTGGLGARKLTSKPNESLYEQKPEELAPALPPVTENSTAKSKSHTSRFEYVENTPSAGSNSEENQVIGHVAPPKSSNFFGEFGMDSGYHKKSAPGPSKVQACYTPHKAFLLTNNWLLILIEESSEARQKFSNAKSISSSQFFGDQASFEKEAQVSLQKFSGSSAISSADLFGHPTNSSNVDLSASDLINRLSFQASQDLSSIKNMAGETGKKLTSLASNIMSDLQDRIL</aaseq>

Gene Sequence

<dnaseqindica>1..81#310..428#1219..1648#1838..2098#2502..2558#2851..2973#3268..3369#3442..3549#ATGGCGACCGACTCCTCCTCCTCCGCTGCCGCCGATAAGAACACCGTCTTCCGCAAGCTCCGCGCCAAATCAGACAACAAGGTGTGTTACTTTGCCCTACCCTAGCCACCCCACCCTCACTGATTCATTTCACCGTCTACCGGTAATCTACCCGCTTGCCTCCTCGATTTTCAATTTACTCACCTCCCTCTAATTTCTCTCTTCACTGTGGTTGTGTGTGTGAGAGAGACTGTGTTCTTCTGTAATTCGTGTGATTTTTTTTCTCTTACGAGTCGACTATATTTATATGTGCGTATGCCTAATTTGCAGATGTGCTTCGACTGCAACGCCAAGAACCCGACCTGGGCCTCCGTCACCTACGGCGTCTTCCTCTGCATCGACTGCTCTGCCGTCCACCGTAGCCTCGGCGTTCACGTCTCCTTCGTCAGGTTCCCCCTCATACACCCCCGCACTCCTTCTATGTCTGCCTGCCTTACAATTCATATCATTTACTGAGGTGCCTTGAGCTAATCATGTATTTTTTTCTCTCTACTAAATTCTGAATTTCGGCCTGCCGGTTATGTTTTCCTTTGCAATTTATCACATTCTGTTATGATTCGCAGCCGTGTGCAAACTTATCATCTTTATGTCATATCTATTAAACTGTACAGAGATATTTACTTGGTATCTGATAATCCAATATATTCTTACATCTAAAAGAAAATCCAATATGGCTTGCAGTGTCGGTTTGCATCATATTCTCTTTGTACTTCTGCAATCTACATTCTCCTGGAAGTTCTAGATTCTCATGATAATTTCTTCAAAGCTAGATATTTTCATGGTGCTGTTCCTTTTCTTTTTCAATCTACTAGGGGCGATATATTTTTGGGATGCCAATATAACACTGTTCCTTTTTAGGTCACTCAATTAAACTGGCACAATAGTATCTTGTAGTAAATTGGCTGAAGATTTCATGGGTGGTGCGCTTGAAGTTATTTTGTCTGTGTTGTAATTCTGTTTGCCATCAACTACACAATCACACCATTTCTACTTATGAGTAATTAAATTTTAAGCTCTGTCAAATTTGGTTTAGAGATCGACGTAACTACAACGCTTCGTTAGATATGTTCTTACCATTTGACTACAGAATTTACATGCTAAACAATATAAGAACTTCTTGTTTAGTTGTGGCCTTCTTTTTTTCTGGAAACCCGTTGAGTTGACTGCTGCAATCTGCAGGTCAACAAATTTGGATTCGTGGACCCCAGAACAATTGAAAATGATGGTTTATGGAGGTAACAACCGTGCACAAGCTTTCTTCAAGCAGCATGGTTGGACAGATGGTGGAAAAATTGAAGCAAAGTATACTTCAAGAGCTGCTGACTTATACCGGCAGTTGCTCGCTAAGGATGTTGCTAAAAATTCCACTGAAGATGGGAACAACAGTTGGCCGTCCTCCCCAGTTGCAGCTTCACAACCTACAAATCAAGCTGATGCAATTCCAGATCTTAAGCTGGCAGAGGCATCTAAAGAAGTTGCAAATGAGAAGACTGAGCCTGAGGTTATTCGTTCACCAAGGGCTCCAACTCATTCTTTCAAGAAGCCAATTGTTGCGAAGAAGCCTGGAAATAAGACCGGTGGACTTGGTGCACGGAAACTTACGTCAAAGGTATGCTCTCTGCATATCCGATTGAGTTAGAGCTTCATCTTCTTAACAAACCATAGCCCTGATTTGAATTGCGTTGCCAACAATGAAATATACCCAAATACCCAGTGAATTTCAATTACAAAGTGTCCATCCTTTTCTCCTCAAGTAAATTGAAAATTCTGTACTAACAACTTTTGTCATTTGTTCCAGCCAAATGAAAGTCTCTATGAGCAGAAGCCTGAAGAGCTAGCTCCTGCGCTGCCACCAGTGACTGAGAACAGTACAGCAAAGAGCAAATCTCATACTTCACGATTTGAATATGTGGAAAATACACCTTCTGCTGGGAGCAATTCAGAAGAAAACCAGGTCATTGGACATGTTGCGCCCCCAAAATCTTCAAACTTCTTTGGCGAATTTGGGATGGACAGTGGATATCACAAAAAATCTGCCCCTGGCCCATCCAAAGTGCAGGTAATGTTTATTTAATACAATCGCTATATTGTATATAGAGTGATGATTGTGAGCATGTGAACTCAATTATATTATGTTGGTCCTCTGTTAGTCTGTTGTCTTAGTTTACATCTTTACATAAACTTGTATATTTGTAGTACTAGTTCAGATGTCCAAAGACAAGATCACAAGCATTTAGTTCCAAACAAGGAAAACACATGAGCTGGTTGACATTTAGCTTCAAATGGAGTAATACTCCCTTCTTGAGTTTTAGTTCCCAACAATCAATAGTTTTGATACTGCTTACTTGGTTCTTGGTAGTAGGCTGGTAGCCAGGGTATTGATGGTACCATGGTTATGTGTCACCTATACTGATCTAACATGTTTTAAAATATAAAGTCATTGTTGACTTTTATTGATTTAGGCATGCTACACTCCACACAAAGCTTTTCTGCTAACAAACAATTGGCTACTAATACTTGTAAGTTTGCAGTCAGCTATATCACACTATGGCTCGCTCTAGTTAGTTTTCATATATCAGCTAAGATACGGTCTTTCTAGTTTCTGTAGCCCAACTATGCATAACGAAATATGTGAATGTGTTCCTGCTGGAAATAAGAAGCTTTGGCGGTGCAAGTGTAGCCCAACTATGCATAACGAAATATGTGAATGTGTTCCTGCTGGAAATAAGAAGCTTTGGCGGTTTCAGTATTTGTTTGCTCAGCGCCAACTTCCAAGAAGTCTGTTAACTAATCAATTTCAGTATTCTCCAGATTGAAGAAAGTAGTGAAGCAAGACAGAAGTTTTCAAATGCAAAGTCAATTTCATCTTCTCAGTTTTTTGGAGACCAGGCCAGTTTTGAAAAGGAGGCTCAAGTTTCCCTCCAAAAGTTTTCGGTAAGTATTTTTACTGTGCTATACTGCCATTGCTGTGGTGTGGTGTTACCAAAATTGATACTTATCTTGTAAAAAAAAGAGGATGCGATAGATGTGGCCTTGTCCTTTTTCTTAAGATCAGGCGGGGTCCTAAGTGAATAAGCAGTGGTTATAATTTGTCTTTAGCTGGTGTGTATCATGGGGAATGGGGGATTAGTCTGGGGCCATGTTCTTATGGTGTATCGGTTATTACCTTTGGAATATCTGCATTGACCTATACAGTCTTATGTTCTTTACCACTTTACCTTGCTGTAGGGATCTTCTGCCATTTCAAGTGCTGATCTATTTGGTCATCCAACCAATAGTTCCAACGTGGATCTGAGTGCTTCAGATTTGATCAACCGGCTTTCTTTCCAGGTAAATTAAGAGTAGCATAGTACAGCTGGGTTTATTGATAGACCTATGATTGATGTCTTGTTATCTCTGTAGGCTTCCCAGGATCTGTCTTCTATCAAGAACATGGCTGGGGAAACTGGGAAGAAGTTGACATCTTTGGCATCGAACATCATGTCTGATCTTCAAGACCGGATCCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031346