Os10g0567500

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0567500| Description = Intron maturase, type II family protein| Version = NM_001071966.1 GI:115483527 GeneID:4349434| Length = 2778 bp| De...")
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Gene Name

Os10g0567500

Description

Intron maturase, type II family protein

Version

NM_001071966.1 GI:115483527 GeneID:4349434

Length

2778 bp

Definition

Oryza sativa Japonica Group Os10g0567500, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22944531..22947308

Sequence Coding Region

22944568..22946769

Expression

GEO Profiles:Os10g0567500

Genome Context

<gbrowseImage1> name=NC_008403:22944531..22947308 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22944531..22947308 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctccgcctccgcctcgccgcgcgctcctcgcccccctcctccgcctccgcgccttctcctcctcctcctcctccctcgcccaccaccccccgttgccgcctcccccgcgccgccaccagttcgtcgccgccgacgccatcaccggccagggcggcggcggcaatccactggacccggcgcagctcctccgcgacgatccggtcgccataaccgcatcgctgtgggtctcctccttccgcccgcagccgaccgccgcagcgccaccgccgccgtcgctgtcgccgttcctgtcgcgcctcgagctctgggtgctcgcgtaccagaaggcctacgccgacgagacgggctcctacctgccccgctcctccatcccggcctccacgctctcctccctcctcgcgctccgcaacgccgtcctcgacgcccgcttccgcttcggcaaccgcctcacccccttcctccgctccccgcgcgccgccgccgcggcgcaggaccccgccacgctctccaagcgcaagctccgcgccctcctcaccaccccggggccggccccgttccaggaccgcgtcgtgcaggagctcctcctcctcctgctcgagcccgtctacgaggcgaggttctcacccaagtccttcgcctttcgccccggccgatctccgcacgccgccatccgcaccatccgccgcagcttcgcgccctacctctggtacatcaagggtgacctctccccgctcctccactccccggaccctgccctggtcgtcggcgcgcttatccgcgatgtgcgcgacaagaaggtcgttgatttggttcgttcggcattgctcaccccacctgtgaccgcgaggcccggcgatgaagatgcggcgaagaagaagaagaagaggaagtaccagaagaagaaggtgcttccagagggagagccgaagcctgacccctactggttacagacattctttgggtttgcgccggaggaggcactcacccagcctgattgggggcattgtggagtgctgagcccattgcttgccaatgtgtgcttagatgagcttgataaatggatggaggagaagattaaggaattgtacaggccgtccaagtcggatgttgtgggaggggaggatggagttgagcaggggaacacttcatggccagagtttgtccccacgagcggccctgacaaaacgaggaaggtggactacattcgattcggtggccatttcttaatcggggtgaggggtccgagggcagatgcagcagtgctccgaaaacagcttgttgaattctgcgaccagcggttcaggatcaagcttgacaacgagagcctcccgatcgagcatatcactaaagggatcatgttccttgatcatgtgctgtgtcgtcgtgttgtgtacccgactctccgttacacagccactggaggcaagatcatcagcgagaagggggttgggactctgctctctgtgacagccagtttgaagcagtgcatcaagcagttccggaagcttgagtttttaaagggggaccgtgaaccagacccacaaccgtgcttcaggatgttccatgccacacaagctcacacaaacgcgcagatgaataagctcttgctgacaatggcagaatggtatcgttatgctgataaccgcaagaaggttgtcaacttctgctcatacattataagggggtccttggcaaagttatatgctgccaaatacaaattgaggtcgagggcaaaggtctacaagattgcttcaaggaatcttagtcgaccattgaaggataagaaagggcagtcgccggagtaccacaatctgctgagaatgggtcttgtggactcaattgatggacttcagtatacacggatgtcgatggttcctgatcctgattacacaccattaccaagtggatggcgccctgaccatgaaaagattttgctggagtatataaagctcacagatcaacaaaccctggatgagcagcgaagctgcattagggaggaaggacttataactccacaggactacatttcaatgcttgtatggagctacaagaaaaatgcagttttactaccttcgttcaaagagaatgatcacaaaggatccacagaggacttgggttcagatacagatgaattgggtgatgaggaaataggaaatctggaccatgtcgattccccaaaggttgctgaaatgccatga</cdnaseq>

Protein Sequence

<aaseq>MPPPPPRRALLAPLLRLRAFSSSSSSLAHHPPLPPPPRRHQFVA ADAITGQGGGGNPLDPAQLLRDDPVAITASLWVSSFRPQPTAAAPPPPSLSPFLSRLE LWVLAYQKAYADETGSYLPRSSIPASTLSSLLALRNAVLDARFRFGNRLTPFLRSPRA AAAAQDPATLSKRKLRALLTTPGPAPFQDRVVQELLLLLLEPVYEARFSPKSFAFRPG RSPHAAIRTIRRSFAPYLWYIKGDLSPLLHSPDPALVVGALIRDVRDKKVVDLVRSAL LTPPVTARPGDEDAAKKKKKRKYQKKKVLPEGEPKPDPYWLQTFFGFAPEEALTQPDW GHCGVLSPLLANVCLDELDKWMEEKIKELYRPSKSDVVGGEDGVEQGNTSWPEFVPTS GPDKTRKVDYIRFGGHFLIGVRGPRADAAVLRKQLVEFCDQRFRIKLDNESLPIEHIT KGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKQCIKQFRKLEFLK GDREPDPQPCFRMFHATQAHTNAQMNKLLLTMAEWYRYADNRKKVVNFCSYIIRGSLA KLYAAKYKLRSRAKVYKIASRNLSRPLKDKKGQSPEYHNLLRMGLVDSIDGLQYTRMS MVPDPDYTPLPSGWRPDHEKILLEYIKLTDQQTLDEQRSCIREEGLITPQDYISMLVW SYKKNAVLLPSFKENDHKGSTEDLGSDTDELGDEEIGNLDHVDSPKVAEMP</aaseq>

Gene Sequence

<dnaseqindica>38..2239#ggccaccgcgagggtttagctttccttctcctccccgatgcctccgcctccgcctcgccgcgcgctcctcgcccccctcctccgcctccgcgccttctcctcctcctcctcctccctcgcccaccaccccccgttgccgcctcccccgcgccgccaccagttcgtcgccgccgacgccatcaccggccagggcggcggcggcaatccactggacccggcgcagctcctccgcgacgatccggtcgccataaccgcatcgctgtgggtctcctccttccgcccgcagccgaccgccgcagcgccaccgccgccgtcgctgtcgccgttcctgtcgcgcctcgagctctgggtgctcgcgtaccagaaggcctacgccgacgagacgggctcctacctgccccgctcctccatcccggcctccacgctctcctccctcctcgcgctccgcaacgccgtcctcgacgcccgcttccgcttcggcaaccgcctcacccccttcctccgctccccgcgcgccgccgccgcggcgcaggaccccgccacgctctccaagcgcaagctccgcgccctcctcaccaccccggggccggccccgttccaggaccgcgtcgtgcaggagctcctcctcctcctgctcgagcccgtctacgaggcgaggttctcacccaagtccttcgcctttcgccccggccgatctccgcacgccgccatccgcaccatccgccgcagcttcgcgccctacctctggtacatcaagggtgacctctccccgctcctccactccccggaccctgccctggtcgtcggcgcgcttatccgcgatgtgcgcgacaagaaggtcgttgatttggttcgttcggcattgctcaccccacctgtgaccgcgaggcccggcgatgaagatgcggcgaagaagaagaagaagaggaagtaccagaagaagaaggtgcttccagagggagagccgaagcctgacccctactggttacagacattctttgggtttgcgccggaggaggcactcacccagcctgattgggggcattgtggagtgctgagcccattgcttgccaatgtgtgcttagatgagcttgataaatggatggaggagaagattaaggaattgtacaggccgtccaagtcggatgttgtgggaggggaggatggagttgagcaggggaacacttcatggccagagtttgtccccacgagcggccctgacaaaacgaggaaggtggactacattcgattcggtggccatttcttaatcggggtgaggggtccgagggcagatgcagcagtgctccgaaaacagcttgttgaattctgcgaccagcggttcaggatcaagcttgacaacgagagcctcccgatcgagcatatcactaaagggatcatgttccttgatcatgtgctgtgtcgtcgtgttgtgtacccgactctccgttacacagccactggaggcaagatcatcagcgagaagggggttgggactctgctctctgtgacagccagtttgaagcagtgcatcaagcagttccggaagcttgagtttttaaagggggaccgtgaaccagacccacaaccgtgcttcaggatgttccatgccacacaagctcacacaaacgcgcagatgaataagctcttgctgacaatggcagaatggtatcgttatgctgataaccgcaagaaggttgtcaacttctgctcatacattataagggggtccttggcaaagttatatgctgccaaatacaaattgaggtcgagggcaaaggtctacaagattgcttcaaggaatcttagtcgaccattgaaggataagaaagggcagtcgccggagtaccacaatctgctgagaatgggtcttgtggactcaattgatggacttcagtatacacggatgtcgatggttcctgatcctgattacacaccattaccaagtggatggcgccctgaccatgaaaagattttgctggagtatataaagctcacagatcaacaaaccctggatgagcagcgaagctgcattagggaggaaggacttataactccacaggactacatttcaatgcttgtatggagctacaagaaaaatgcagttttactaccttcgttcaaagagaatgatcacaaaggatccacagaggacttgggttcagatacagatgaattgggtgatgaggaaataggaaatctggaccatgtcgattccccaaaggttgctgaaatgccatgagtgttgaattgatgaaaatgactactactctcatactctgaaggggcagttaacaagatagctgactgatgctgctggagttgcaagaaatcaactaactcgtggtgaacataaactatggtatagagctgtaatgtgcctgtcaaatctcttgcaatcagctgggctggttcctaagtgcctaactagatgtctgattcctactcagggacatcaaattttgtgcagcttcaacttcaacaatatttctcaatactcaggattatattggatgcttgctgcggtgagaaagaagccagaatggacattcagaggatcaaactttgctgccagactgtgcatctgcatgcagaaccagctgcttaccgccaagcttatattttagtaagactagcggccttaccaatcctatttatacatctccagcgcatttggaaaaatcacagtgtacacattctgcccaaacgtcctgttcgtgcaattttctactcatctgtagaatgttttacagaaagcagaggtcacagaatttacttata</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0567500, RefSeq:Os10g0567500

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os10g0567500&oldid=3059"