BGIOSGA031416

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Revision as of 04:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031416, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA031416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031416, complete gene.

LocusTag

OS10G0558900

Ensembl Transcript ID

BGIOSGA031416-TA

Ensembl Protein ID

BGIOSGA031416-PA

Length

4184

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21017560..21021743

Sequence Coding Region

21021489..21021743,21020428..21020675,21019987..21020311,21018963..21019210,21018522..21018846
,21017560..21017805

Genome Context

<gbrowseImage1> name=IndicaChromosome10:21017560..21021743 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:21017560..21021743 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAAGCAAGAACCATTGGTTCTATCTCGGTGCCTAATGTGCAGGAGCTTGCAGGAACTTGCAATGGCATAGATGAGGAGATACCTGAAAGATACATCAGGCCAGAAGTTAGTTCCGACGAGGTCATCAAGAACAACCACGGTGATATGTCGATTCCGATCATCGATCTCGACAAGTTGATTTCTCCTCAATCATCACAAGAGGAGTGTGTCAAGCTGATATCTGCCTGCCAGTATTGGGGGTTCTTTCAGCTCATCAACCATGGAGTGCCAGATGAAGTGATTGCAAATCTCAAGAACGACTTGGTTGAGTTTTTCAGTCAGCCACTGGATGCCAAGAAGGAATACTCACAGCTGCCCAATAACCTTGAAGGTTATGGACAGGCCTTCGTTGTGTCCGACAACCAGAAACTAGACTGGGCAGACATGCTATACCTTCAAGTCTGTCCTACCGATTCAAGGGACTTGAGATTCTGGCCCAATTACCCTGCCTCTTTCAGGCATTCCATTGATGCATACTCATCAGAGACAGAAAATATTGGACTCTGCCTGCTGCAATTCATGGCCAAGGCCGTTGGTGTTGAGCCGAAGTCGTTGTTAAGTGTATTTGAAGGGCAAGCTAGGGGTTTGAGGATGAACTACTATCCACCGTGCTTGAAAGCTGACAAGGTGTTGGGTTTGTCACCGCACACTGATCCAGGTGGCTTGACACTGCTTCTCCAGGTGAATGATGTACAGGGCCTGCAGATCAACAAGGATGGCAAATGGTTCTCCGTGAATGCTCTGAATGGTGCACTCATCGTTAACATTGGCGACACACTTGAGCTCATCAACCATGGAGTGCCAGATGAAGTGATTGCAAATCTCAAGAACGACTTGGTTGAGTTTTTCAGTCAGCCACTGGATGCCAAGAAGGAATACTCACAGCTGCCCAATAACCTTGAAGGTTATGGACAGGCCTTCGTTGTGTCCGACAACCAGAAACTAGACTGGGCAGACATGCTATACCTTCAAGTCTGTCCTACCGATTCAAGGGACTTGAGATTCTGGCCCAATTACCCTGCCTCTTTCAGGCATTCCATTGATGCATACTCATCAGAGACAGAAAATATTGGACTCTGCCTGCTGCAATTCATGGCCAAGGCCGTTGGTGTTGAGCCGAAGTCGTTGTTAAGTGTATTTGAAGGGCAAGCTAGGGGTTTGAGGATGAACTACTATCCACCGTGCTTGAAAGCTGACAAGGTGTTGGGTTTGTCACCGCACACTGATCCAGGTGGCTTGACACTGCTTCTCCAGGTGAATGATGTACAGGGCCTGCAGATCAACAAGGATGGCAAATGGTTCTCCGTGAATGCTCTGAATGGTGCACTCATCGTTAACATTGGCGACACACTTGAGATCCTGAGTAATGGAAAGTTCAGAAGTGTTGAGCACAGGGCCGTGGTACATCCAAGCAGAGAGAGGATTTCAGCGGCACTGTTCTACTATCCGTGCCAGGATATGGTGATCAGCCCTCTGCCGGACTTTGTGAAAGATGGTAAAGTGAAATACAAAACAATAAGCTACCAGGATTTGCTGACAGAGTACTTCACAGCAGAGCTTGATGGAAGGAACCGGCTAAAGAAAATGAAGCTGGAACCGTAG</cdnaseq>

Protein Sequence

<aaseq>MAEARTIGSISVPNVQELAGTCNGIDEEIPERYIRPEVSSDEVIKNNHGDMSIPIIDLDKLISPQSSQEECVKLISACQYWGFFQLINHGVPDEVIANLKNDLVEFFSQPLDAKKEYSQLPNNLEGYGQAFVVSDNQKLDWADMLYLQVCPTDSRDLRFWPNYPASFRHSIDAYSSETENIGLCLLQFMAKAVGVEPKSLLSVFEGQARGLRMNYYPPCLKADKVLGLSPHTDPGGLTLLLQVNDVQGLQINKDGKWFSVNALNGALIVNIGDTLELINHGVPDEVIANLKNDLVEFFSQPLDAKKEYSQLPNNLEGYGQAFVVSDNQKLDWADMLYLQVCPTDSRDLRFWPNYPASFRHSIDAYSSETENIGLCLLQFMAKAVGVEPKSLLSVFEGQARGLRMNYYPPCLKADKVLGLSPHTDPGGLTLLLQVNDVQGLQINKDGKWFSVNALNGALIVNIGDTLEILSNGKFRSVEHRAVVHPSRERISAALFYYPCQDMVISPLPDFVKDGKVKYKTISYQDLLTEYFTAELDGRNRLKKMKLEP</aaseq>

Gene Sequence

<dnaseqindica>1..255#1069..1316#1433..1757#2534..2781#2898..3222#3939..4184#ATGGCAGAAGCAAGAACCATTGGTTCTATCTCGGTGCCTAATGTGCAGGAGCTTGCAGGAACTTGCAATGGCATAGATGAGGAGATACCTGAAAGATACATCAGGCCAGAAGTTAGTTCCGACGAGGTCATCAAGAACAACCACGGTGATATGTCGATTCCGATCATCGATCTCGACAAGTTGATTTCTCCTCAATCATCACAAGAGGAGTGTGTCAAGCTGATATCTGCCTGCCAGTATTGGGGGTTCTTTCAGGTATGCAACTTTAAGTTCTTGGCTTTTGCTCTTGAAGAGTAATAGGTAAAAATGGAATTGGCTAGCTATAAGTACTATTTTATTCTTACTAAACTCTTACTACTAACACAGTGGTGAGTACGATATTTTGGAAATCCCATCTAATTAAATTAAACGGTTGATATTATTGTTTGTAAGAGTTATGTAATAAATTTTTTAAGTACATCTAGCAATATTCGTGGGAAAAAAAGAGGGGAAAGTCAGTTTACGAATAGAGTCACCTAAATAGCCTTAAGAAAATTTAAAACAATTGATTACATACTAAATTAATATTCATAACAAAATTTGTACTTTAGGTTGTAAGGATGTATAGATTGAATTTAGTTTTGCATGTTTATAGAGCGATATATAACTTAATTGGCATGCATAATATGAGGGCACATGCACTCGAGTTGTAAAAATCCTACTCTGAAAAAAAAACGTAGATTAGTTAAGACATTAGAGGTAGTAATCTATGCTTTTTATAAAGTTCAAGCTCACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTATTATTTGACTGGATAAACCCTGATGCTTCATTATTTTTGTTCTTTTTACTCCTAACTTGATTGTCAAAAAAGATATTGAAAATTGTTTAGTAATTCCCGTAGCCAAGCGCGGGGAATCACCTAGTAATTCAATTAAGCTGATGCCAGAAAAATACATGTACTGACAGTAGCTCTAGCTCAGTTTGAGATGTGCAAATAGTATAACAAAAGCATTACTTATGCAACAAAAACTACAGCTCATCAACCATGGAGTGCCAGATGAAGTGATTGCAAATCTCAAGAACGACTTGGTTGAGTTTTTCAGTCAGCCACTGGATGCCAAGAAGGAATACTCACAGCTGCCCAATAACCTTGAAGGTTATGGACAGGCCTTCGTTGTGTCCGACAACCAGAAACTAGACTGGGCAGACATGCTATACCTTCAAGTCTGTCCTACCGATTCAAGGGACTTGAGATTCTGGCCCAATTACCCTGCCTCTTTCAGGTGATACTACCGACAAATTATTATGCAACTAATTACTCCATTGATAAGCATATGTTCATTATAACTTTTAAAGCATACATATGTCCATTTATTAACTTGAAATATCTGAAAATTAGGCATTCCATTGATGCATACTCATCAGAGACAGAAAATATTGGACTCTGCCTGCTGCAATTCATGGCCAAGGCCGTTGGTGTTGAGCCGAAGTCGTTGTTAAGTGTATTTGAAGGGCAAGCTAGGGGTTTGAGGATGAACTACTATCCACCGTGCTTGAAAGCTGACAAGGTGTTGGGTTTGTCACCGCACACTGATCCAGGTGGCTTGACACTGCTTCTCCAGGTGAATGATGTACAGGGCCTGCAGATCAACAAGGATGGCAAATGGTTCTCCGTGAATGCTCTGAATGGTGCACTCATCGTTAACATTGGCGACACACTTGAGGTAATGACTAATCCCGTTCTCGGGGCAATTGTATCGTATCGATGTAATTTCATGAGTTAAATAAAGCTTTTATCTTTATACTATTATAAAAGTTGAAGATATTTTTCCCGGTATTTTGGTGCGTCATCCATGTATGAGTCAGTTTCTAAGTTCGTTCGCTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTAAAAATCCTACTCTGAAAAAAACGTAGATTAGTTAAGACATTAGAGGTAGTAATCTATGCTTTTTATAAAGTTAAAGCTGCGCTAAGTCTAAAGCTCAACATGCAACCATACCACATCATCACCCACTAGCAATAATTACATATTTAATCTCGTGCAAGCTTACAACATGTTCTATAATTTATTTAATTCTACAAATCAAAATGAAAGCATATCCAATCATCACCCCTCATATCATTTGCATAATATTTTAACAAATCTATCTATCACTTTTACAATATTTAACATATACTTATCAATATGTTTCACACTAAAGCACGGGTATTATTTGACTGATAAACCCTGATGCTTCATTATTTTTGTTCTTTTTACTCCTAACTTGATTGTCAAAAAAGATATTGAAAATTGTTTAGTAATTCCCGTAGCCAAGCGCGGGGAATCACCTAGTAATTCAATTAAGCTGATGCCAGAAAAATACATGTACTGACAGTAGCTCTAGCTCAGTTTGAGATGTGCAAATAGTATAACAAAAGCATTACTTATGCAACAAAAACTACAGCTCATCAACCATGGAGTGCCAGATGAAGTGATTGCAAATCTCAAGAACGACTTGGTTGAGTTTTTCAGTCAGCCACTGGATGCCAAGAAGGAATACTCACAGCTGCCCAATAACCTTGAAGGTTATGGACAGGCCTTCGTTGTGTCCGACAACCAGAAACTAGACTGGGCAGACATGCTATACCTTCAAGTCTGTCCTACCGATTCAAGGGACTTGAGATTCTGGCCCAATTACCCTGCCTCTTTCAGGTGATACTACCGACAAATTATTATGCAACTAATTACTCCATTGATAAGCATATGTTCATTATAACTTTTAAAGCATACATATGTCCATTTATTAACTTGAAATATCTGAAAATTAGGCATTCCATTGATGCATACTCATCAGAGACAGAAAATATTGGACTCTGCCTGCTGCAATTCATGGCCAAGGCCGTTGGTGTTGAGCCGAAGTCGTTGTTAAGTGTATTTGAAGGGCAAGCTAGGGGTTTGAGGATGAACTACTATCCACCGTGCTTGAAAGCTGACAAGGTGTTGGGTTTGTCACCGCACACTGATCCAGGTGGCTTGACACTGCTTCTCCAGGTGAATGATGTACAGGGCCTGCAGATCAACAAGGATGGCAAATGGTTCTCCGTGAATGCTCTGAATGGTGCACTCATCGTTAACATTGGCGACACACTTGAGGTAATGACTAATCCCGTTCTCGGGGCAATTGTATCGTATCGATGTAATTTCATGAGTTAAATAAAGCTTTTATCTTTATACTATTATAAAAGTTGAAGATATTTTTCCCGGTATTTTGGTGCGTCATCCATGTATGAGTCAGTTTCTAAGTTCGTTCGCTTTTAGAAATACATATACCGTATTTGAGTCGGTTTTTAAGATAGTCACTTTTGATAATACAGAAGGAATAATATAAGAAATCTGTTTAAAAAACTCGCATGCTAACATGAGGTGATCGGACTCCTAACTGCAGCTCATGATTTTCTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCAAACGAACTCCCACAATAAATTTCATCTTAACTAAACCATATAACAATAATAATATTAAAATAGACTCCACCAGTTGCAACACACGAGCATTTTTTCTAGTTATTTAAAAAAAAAGAACTAATCCCGTTTGATATAGGATATTAGGCAGATTATTTTATTGTGAATCAAAATATTTTTAAGAAATAAATTTAACAAATAGCTTAAAACAAATGATCAGTACAAAATCATTTTGGTTGTGGCCGATAAGCCAATGAGTAGACAATCAAAGCCGCTGATGCTCAACTTTTGGATCAACATGTTTTTCTGATGTACAAGTACGGTCGATGTGCGCTGTTGATGTGTGCAGATCCTGAGTAATGGAAAGTTCAGAAGTGTTGAGCACAGGGCCGTGGTACATCCAAGCAGAGAGAGGATTTCAGCGGCACTGTTCTACTATCCGTGCCAGGATATGGTGATCAGCCCTCTGCCGGACTTTGTGAAAGATGGTAAAGTGAAATACAAAACAATAAGCTACCAGGATTTGCTGACAGAGTACTTCACAGCAGAGCTTGATGGAAGGAACCGGCTAAAGAAAATGAAGCTGGAACCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031416