Os10g0568200

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Revision as of 08:49, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0568200| Description = Chaperonin Cpn60/TCP-1 family protein| Version = NM_001071972.1 GI:115483539 GeneID:4349440| Length = 5790 bp| Defi...")
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Gene Name

Os10g0568200

Description

Chaperonin Cpn60/TCP-1 family protein

Version

NM_001071972.1 GI:115483539 GeneID:4349440

Length

5790 bp

Definition

Oryza sativa Japonica Group Os10g0568200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:22982213..22988002

Sequence Coding Region

22985409..22985516,22985843..22986013

Expression

GEO Profiles:Os10g0568200

Genome Context

<gbrowseImage1> name=NC_008403:22982213..22988002 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:22982213..22988002 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtgcattggatgggatcccactagccctagctgaaaacagtggtttgcccccttttgatacgtcgactgcagtaaatcctcagcaagtgaagttttttttttttttgcctcctgaactacctttgcaagatagcaatcctcatcatggtattgactgcaattgcattcgaacaaacggcatcagagaacaaaacaagcagcagcagatcgtgctgacaactcaggtggtgaaaatgattctcaagattgatgacattatcacacagtctgactgctga</cdnaseq>

Protein Sequence

<aaseq>GALDGIPLALAENSGLPPFDTSTAVNPQQVKFFFFLPPELPLQD SNPHHGIDCNCIRTNGIREQNKQQQIVLTTQVVKMILKIDDIITQSDC</aaseq>

Gene Sequence

<dnaseqindica>3197..3304#3631..3801#aatgtatcatcattcatcagcaaaacagacgaacaggttgaggagtgtcatattctggtgatggaagcggaagcagccgacggcttggggcgccgccttgtcaagcatcatccaccgccgggggaggaagcggccgtccatggcgccgctctgcgagcagcggggatccaccgagcacagccgccacggccggcacacggcgcggaagcggatgtagtcggcgacgtcgttggcgaggacgcgctcggcgatcaacccggcggcccctccccaccaaggttcgaccagtccatcctcctcctcctccttccccgcacgctccgccgccaccaccgatggggaactcggctcgccgccgtcgccgccggtgggagtgggagttagagtcggccggtggccttctgatgggccaagttgccacccctacctatctcggcccatctaggcctctgtccacgaagcctctgatgggcccatctagccttctgatgggcccatgaagcgtttttttttttcctcctcggctcctcgcgccgccgcctaatggattccccaactccgatgcttctagaaccttccgagcctcgcgcgcgccgccgccgccgcggccatggtgctggcctccgacgagttcggctggtcgatctcgttcaccatcctcgaggaggaggaggaagaaggagtagaagacgcgtcacgcgactgtgggggctcgactcgacgcgcagaaggcgggccaatgtcgccgccggcgaggccgtggcggcgcgcatcctccgcgcctacctcgacaccaagggagatggtccagttcccctgacggcgaagccaccattagtaaccacctgctaacctcctctcctgtcttccctgtttggcttgcttcctgtttgttgggtgagttgcttgcttccatgggatctggagttctggacattgcaagccggtttgcttttgaagcttagtgcctttcccttagatcaacatgcttgtttgattgttgattccactggagtgttctgtgcgaggtgttaagtgtagcccgtcgtttctgcagttgggttaattgccgccctagtgagggaatgtgcaccctaaagattaagatctgtttgatggatcagttcttgtcatacatgtgtctttgtggggatctgggtttgtggttttagcagttgatcgtggggttatgcatataggttacttatctgaattggtgtttcttcgtacagttgttgacccatttactgattgaacacctttacctatgaattgcagcaaatgctggagcaatgatgctggacagctggaggcctggagcaaatggatgttgataaccagattgctaagctgatggtggagctctcccgcatcaagattgtgaaattggggatggtaccactgcgatggtggtcatgtttggatcacttctagaccaagctgagaaactgttagaatatggtattcttccaattaggatttctgaaggttatgagatggcgtcaaggatagtttttgattatctcgaacacatctcccaaaagttttagttcagtgctacaaatatagaacctgtttttttgtacaaacctgtacgataattgacaaccctaaccccatcattatcttcatatgctttgtttgttcaagtttttattttgggtactttcaccccatcattggtgaatctaaccaagacaccttgtgctagctgttagcagaatttatctgtaggtggtttgaacattctgcattgattttgcaggaaacgaaatgattattgaggagaccaagtgaagtattcatgatgctctgtgtggctaggaatctgattcgcaagaactctattgtttatggtggtggctcagctcagatatcatgctcaatctattatattattaaaggaatagaaaaaggagtctccacgttcgctctcatggcctagaaattctcacattaatcggagaaaaagaaaaagcagagtccatatagaaatacaatttagaaagagctgaaattcggaattaaaaaaataagaaatattagaagaggagactagagtccatatagaaatacaatttagaaataattgaaattcggaattaaaaatataagaaatattagaagaagagactagagtccatatagaaatacaattaggaaataactgaaattcaaaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaggaaacaatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatataaaaatacaattaatacaattaagaaaaaaaatagaaatacggaattaaaaaataagaaatattagaagtagagtatagagtccatataagaatttaaaactaactaaaattcggaataaacatagtaaaattaaaagtaaagttttgagtccgtataaaaatacaatttacaaataactaaaattcgaaattaagaaaaacatgggaagaagagtttaaagtcaatataggaatacaatttagaagtaactgaaattcgaaattaaaaattaaataatattgagagatgagtttagagtccacatagaaacacaattaaaaataataaaaattcagaaataaaaataaataatattagaagaagagcctaaagtctatatagaaatacaatttacagaaaattcggaattaaaaaaagaaatattaaaagacgagtctagagtccatataggaatatatataatttacaaataactaaaatttgatattaaaaataattactaaccaacacgtatataaaatacaatatgaatattactcatttgtagtttcgtaaagttattgcaaaatttaaaattatgatatcattttaatatatttgaataatataatgagaaaacatatatgctattatatgagagaaaatataatgatgctagccgagcaatctgcgcgggtcaccatgctagttgctgttaaaactgcagcagatcaacagcctggagttgaccaagtaagtactgacattggacatttaagttacaaaatgaagcaatgtctgcctgtcttctgattgtgtctgtgtacctggagtatgctatcattatctgatacctgaaaactgtacgtgcagatctccctgagacgtctctcccacacatcgctcatgccatttgaggtgcattggatgggatcccactagccctagctgaaaacagtggtttgcccccttttgatacgtcgactgcagtaaatcctcagcaagtgaagttttttttttttttggtaatccttaaactttattctgttgctttagttatagacttatagttgacattaattgactacatttagtctgattaggtcgccccactcctagtatgttttgggctcataaaaaatgcttcatatgccatcaactcaaccagcacatacgcctactatctgttagttaatctggtggatgcaagaaaatatatagaatgctatataatagagaaccctctagttataggatgatatgctaaggaacctatgttctttctattatatagcatcctcgcacatcagttattttgaagcattgtgtaatattgtgggtaacttcccagcctcctgaactacctttgcaagatagcaatcctcatcatggtattgactgcaattgcattcgaacaaacggcatcagagaacaaaacaagcagcagcagatcgtgctgacaactcaggtggtgaaaatgattctcaagattgatgacattatcacacagtctgactgctgaatgctgatgacaacctgcccagctggtgaatccattatttcttccttgcctctttttctcaacataaaatatgaaaaggaaaaagaaagaactggtctcttgttttgtcttgctaccatctgccaaacctttgtttcaggcaagcctgtgcatcgcatgaaaacataacaagtcacatctgaattagtgtaactttttttatggagaaggaccttttgctgtattcttttcatatgatcgatgctagtgggctgcttagtatcatacttttactggtgagctgaagttaggaacacgtttgctctgttttgattgtttgtaatattttctcttctcttagcgaggaagaaagggttatcataatgaggaaggtttggttatctggtgaacatggaaagtgatgtttaaagaaattataattttatactatacagttgtttatgttttacctgtatattaagaactcacatcacatacattgcatgtacaggggtgatgcaacatggtaagaaaagcaaggcaatttttcctggctctaattaatcagcatttggtgtgcttgagctttcgaccggacagcatgctctcgatggaagccttccagaccttgcagtgcatctggttgtccagcagcagctgcaccgtccctgctgccgtgctcagcgccacggggaagaacttccgacaatccaccaccgcctcgccaccgccagagactgccaacacctcatctggaccaagcacaaacaacagggttcaggcatcatcaccgacaagcagaacgaagatcaatacactagtggcaagcagttcagctggttcatgcaggtaaatttttttaattattacagtgctggtatgttgtgaatgctccatgcaggcgcttcttccccagcctcagagccaccgtgccgcactccgggaagacggccaccgtcctcagccgcaaccttcctgtaatgccacccaaataccccaatatcatattatcattagattgcttgctgcaccatgctcaatgctagatcctaggagctagtactaccttctttctttataacagataaaatatcctaggagtactatatatcttcatttttaagaaacaaaatctcttagaattactatctttttttaatattttggggaaggaaatataatctcttaggacttaggagtagtactatcttagtactcctcatagtcagagtcttagtactttgtactagggcataacaatgtagtactactagtagtgatgctattttttaaggtactaatatcattggtttggtctcttaccacaaggcaggcaaaccctgagaattgtgcctttctgaatgctagctgtattggtgctcatcatcatcatggagttgctggtgctgctgctgatccctctgctgacgtctgctctcagcttcagcacagctgctcctctcagacctggaaaaagcatacaagaagctcagcatcatagcatcagtgagtttgtagcttcgatcacttggttgagtttcaccactgaagtgttgattacatgtggcagcggtggcggtgagggtgagcagctcggcgggggagcggctgtcgaggccggccttcacggcggaggtgacccgggacctgtcggcaccggcagactccgcgaactcggcacagacggtggccaccagcgcggcagccgaggcaagcaccgtgctcagcttcctgtcagccccagcacccccagagctgctcctcagctcgcaagctgacacgacgccggcgatcgcagctgcgagctgggccaccgagacggcggcgtgggcctgcgccgtgtgcagccggagctcgtcgcgcctcttcctccgactcccggcgatggggatgctgtccatcaagtatcctctcagaattgccctcatgtgtcccatgttcagctgctcattttcagtggaaaccaaaagctttcgtcaattcacttcactgtgccagatccgacaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0568200, RefSeq:Os10g0568200