BGIOSGA031449

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Revision as of 04:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031449| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031449, complete gene.| tag = OsI_345...")
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Gene Name

BGIOSGA031449

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031449, complete gene.

LocusTag

OsI_34575

Ensembl Transcript ID

BGIOSGA031449-TA

Ensembl Protein ID

BGIOSGA031449-PA

Length

4541

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20610662..20615202

Sequence Coding Region

20615119..20615202,20614955..20615012,20614600..20614812,20613097..20613176,20612898..20612984
,20612645..20612697,20612354..20612414,20612207..20612263,20612023..20612100
,20611824..20611929,20611472..20611617,20611281..20611391,20610662..20610850

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20610662..20615202 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20610662..20615202 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCAGCGACACTGGCCATGGCGGCTCGCCGTGTTCGTCGCCGCCGTCGTGACGCCGGTGGCTGCCGAGGAGAGGCTGGTGTGTTCGATCGATTGCATTGCACCGCCGCTCGCCGAGCCGACGGCGAATCGCCGGCGAGTGTGCCTCGACGGGAGCCCGCCGGCGTACCACCTCCACCGGGGCTCTGGCGGCGGCGCCGGCGGCTGGGTGCTCCAGTTCGAGGGCGGCGGGTGGTGCAACGACGCGCCGTCGTGCGCGGAAAGGGCCGGCACGCGGCGAGGCTCCACGCGCTCCATGGACAGCCTCGAGGTGTTCTCCGGCCTCCTCAGCAACGATCCGGACATGAATCCAGATTTTTACAACTGGAATCGTGTCAAGCTGAGGTACTGCGATGGTGGCTCCTTCGCCGGTGATTCAGAACTCAGAAATGGCTCTTCAGTCCTCTACTTCAGAGGTCAGAGGATATGGGACGCTATCATCAGTGATCTCCTTCCAAAAGGCCTTGCAAAAGCCCAAAAGGCTTCAGAGCTTGCCCTGTTGCCTTTGTTCTTAACAAGTTCTGAATTTTTCAGGGATGACATTACTGGCAACAACACTGTTGAGCCTTTCTTTAGGAGCCTAGTAGCTTTGCAGGGAGCTGAGAAGAATTTGAACAAAGACTGTTTAAGTTCAACAGACTATCCATACCAGTGCTTCTTTCCGCAATATATACTTCCATACATCAGAACCCCTTACTTCATTTTGAATTCAGCTTACGACGTATATCAGTTCCATCACAATTTTGTGCCTCCTTCATGTGATCCTAAAGGCCAATGGAGCCACTGTAAGTCGGATCCTGGTGCATGCAGCACATCCCAAATTGCGACTCTCCAAGGACTCAGGAATGCAATGTTGACGGCTCTGAAGCCGTTCCAAAATGAACAGGGTGTAGGGATGTTCATAAATTCTTGTTTTGCACATTGCCAGAGTGAGCTGCAGGAAACATGGTTAGCACCAAATTCGCCCAGGCTGCAAAACAAGACAATTGCAGAGCTGGTTGGTGAATGGTACTTTGAGAGAGGGCCTGGCATAGAAATCGATTGCGCATATCCTTGCGACTCAACTTGTCACAATATTATACCTTCTAATCAGTTGAGATTGCTGTACGTTGCTGTGGATGTTGCTGCAGCTGCAACCACAATAACTACTAGTTTATATCAAGCTATACTAGGCTACTGCAGCGCTGTGACTGTGCAGCACTGCAGCCACAGCCACAGCCACAGCCACAGGGAACCGAACATCCCAAATGAATATGCAGACACAGTTAATCCTGATTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAQRHWPWRLAVFVAAVVTPVAAEERLVCSIDCIAPPLAEPTANRRRVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAGTRRGSTRSMDSLEVFSGLLSNDPDMNPDFYNWNRVKLRYCDGGSFAGDSELRNGSSVLYFRGQRIWDAIISDLLPKGLAKAQKASELALLPLFLTSSEFFRDDITGNNTVEPFFRSLVALQGAEKNLNKDCLSSTDYPYQCFFPQYILPYIRTPYFILNSAYDVYQFHHNFVPPSCDPKGQWSHCKSDPGACSTSQIATLQGLRNAMLTALKPFQNEQGVGMFINSCFAHCQSELQETWLAPNSPRLQNKTIAELVGEWYFERGPGIEIDCAYPCDSTCHNIIPSNQLRLLYVAVDVAAAATTITTSLYQAILGYCSAVTVQHCSHSHSHSHREPNIPNEYADTVNPDS</aaseq>

Gene Sequence

<dnaseqindica>1..84#191..248#391..603#2027..2106#2219..2305#2506..2558#2789..2849#2940..2996#3103..3180#3274..3379#3586..3731#3812..3922#4353..4541#ATGGCTCAGCGACACTGGCCATGGCGGCTCGCCGTGTTCGTCGCCGCCGTCGTGACGCCGGTGGCTGCCGAGGAGAGGCTGGTGGTGGGCATGACTCTCCTCCAAGCTGCCACATCGACAGGAGCAGGCGAGGAATTCTTCTTGTTCTTGTTCTTGTTCTTCTTCTTCTTCTCTGTGTGCGATTTCTTAGTGTTCGATCGATTGCATTGCACCGCCGCTCGCCGAGCCGACGGCGAATCGCCGGCGAGGTCAACGAGAAAGGAAATGGAGATTCATTTACCAATTTACCATGCAATTGGAAAATTCCTTAATTAGTTGACCTTGCTAGGCACACACGTACACATCGTTTGCATTCTTGATCGTGCGCGTTGTTTCAATCGATCTTTGCAGTGTGCCTCGACGGGAGCCCGCCGGCGTACCACCTCCACCGGGGCTCTGGCGGCGGCGCCGGCGGCTGGGTGCTCCAGTTCGAGGGCGGCGGGTGGTGCAACGACGCGCCGTCGTGCGCGGAAAGGGCCGGCACGCGGCGAGGCTCCACGCGCTCCATGGACAGCCTCGAGGTGTTCTCCGGCCTCCTCAGCAACGATCCGGACATGAATCCAGGTGCGAAGTGTACGGCCAATATAAATTTCCAAGTTAAGTCACTGTGTTTCTTTCTCAAACAACAACAAGTAGCATTGCGCAAAAGAAGAAAAAAAACCATTGATTTATACTCCCTTCAGATTAGTAATCTTAAAAACAAATTTTATCACACATTTTATATGATAATATCTATGCTATTTAAAATGATATTAGTGGTTGTGTCCGAGTCTGCCTCCAATATCATCTGATATGTGGGGTCATAAGTATAAAATTATCAACTCGTGAATGGTATTGGAATTGCTAATTGTAGGAATTGTAAAGGGTTACATATAAAACCTTCAAATTTACCTTTCACCTCCTTTATCTAAAAAAATTTACCTTTCACCCATAGATGAGTTATAAGCGTTCAATTTTGTATATCCGACAAAATGGCTTGTGAAAATAGACGAAGAGGATAAAAAAAAAGAAGATCATCTAGCAAAATATTTTAGTTTTGACTTTGGATATGATATTATATGTCTAATCGAGTGACTATGCTATAACTTTATAATTTTTTCTTTGCTTTTATCACTTATAATATCCACTGTAACACACGGGTAGTATACAGAAATATCAACAAATATATGATTTTAAAAGATCAATAGCGGTAACAATAAATATTATGAATCCGGAGGTAGTAGCTCGTAATGAGATGCCTTTTTCTTCAAATAACTTCGTACATTTACCAGTTCATACGGCAAGTTGTTAGCAACAACAGACGTTTCCGTTCTTGGTGGTACGTGAGTTTGCTTTTGCAAAAGGTGACAGCGAGCAAGTACAGTCACAATCGGGTAGGTACCATGAAGGGATGAACAGCTCATGGTCAAGAATAGTTAGATTCACTATGCAAAATGTGGAATCGTGCAGTAGTACATTTACTAGTCTAGACTCTAGAGTCGGCACATCGACATCAGGCTAGTGTAAATTCAGGTTCATCAACCTACAACACAACTTATTAGGTTTCTCGAGTTTTAGCCTTTCAGGTTGTTGTTTTAGAGGATTCATAATGTATATTTGCTTGTTTGGTGATGATTCAATCGTTCGACTAGTAATTTCAGACTATCTAAGTGACTAATTAAGTTGGCGTTCCTAATCTGCTATATCACTTTTTTATTCTAACTTTGATTACTTTGATGCAGACATGCAGATTTTATACAGTACTTTTGTTTTCTACTTTCTCCATTTCATATTATAAGACTTTCTAACATTGCCCACATTCATATAGATATTAATGGATCTAGGCACACATATATATCCACATATTCATGAATGTGAGCAATGCTAGAAAGTCTTATAACCTAAAACGGAGATGGTATTTGCTCTTCTTTTACCGTTCAATTATTCTATTTATCATTTAAACAAAAATGTAGGGATTTTAACATAGTGTTTGTCGTCAATTTGGCAGATTTTTACAACTGGAATCGTGTCAAGCTGAGGTACTGCGATGGTGGCTCCTTCGCCGGTGATTCAGAACTCAGAAATGGCGTACGCTTCCCTGACTGAAACAAAACATGTCTTCAATTGAATTGCTTGTGTTTTTTTTTCTTCTGCATTGTTCAGTACTCAACTCACTGTTTTGTGTTTTACCACTTTGCAGTCTTCAGTCCTCTACTTCAGAGGTCAGAGGATATGGGACGCTATCATCAGTGATCTCCTTCCAAAAGGCCTTGCAAAAGCCCAAAAGGTTCATTGGTTCTCCTGAAAACAGTTTGTTCCATTTCAGTATTTTCTGCACAAACTCATTTTACAATTTTCATCGCGATTAACTTAAGCTGGAATCCAATTCTTTGATGCCAATGTAAGCTTTTCAGAACTAACAATAACTTACTAGCTACTCCGAGAATCCTAAACGGCATCATAATTCATAACTCACTCATTCTTCAGGCTTCAGAGCTTGCCCTGTTGCCTTTGTTCTTAACAAGTTCTGAATTTTTCAGGTATTGCTCTCAGGCTGTTCAGCAGGAGGCCTAGCTACATTCTTCCACTGCGACGACCTCAAAGGACGTCTCGGAGATGCTGTCATTGTGAAATGCTTGAGTGACGCAGGATTTTTCCTTGATGTGTAACAGTGGAGTCTAATCAAGCAAAAAAAAAAAAACTTTGGTTGACTGATTCTTGAACTCATTGGGTTGAAACACAAAAATTTACTTTGGTTGGTGTCCTGCAGGGATGACATTACTGGCAACAACACTGTTGAGCCTTTCTTTAGGAGCCTAGTAGCTTTGCAGGTAACCGACTAGTTAAGCGTGTTTCTGCACATTGGATTTCACATTATTTGGTAGTGTTTTAATTTTTAAAGCCATGAGTTTTTCACGCAGGGAGCTGAGAAGAATTTGAACAAAGACTGTTTAAGTTCAACAGACTATCCATACCAGGTAGTATCAATTAAGATTTTTTTTTATCTTCCCTTTCAAAGTACTGAATTTCATTGTTCAAAAGTTACAACTTTTTATAATCTTCTTGTCTCACTTCTCTGCGCAGTGCTTCTTTCCGCAATATATACTTCCATACATCAGAACCCCTTACTTCATTTTGAATTCAGCTTACGACGTATATCAGGTAAAAAAATGACATGGCGCAACTTGATGTTTTTTAGCATATGGTTATACAACTCGCAAGCAAAAACGCATGATTTTTACCTTTTTTGAACAGTTCCATCACAATTTTGTGCCTCCTTCATGTGATCCTAAAGGCCAATGGAGCCACTGTAAGTCGGATCCTGGTGCATGCAGCACATCCCAAATTGCGACTCTCCAAGGTTACCTTTTTTTTTTTCTTTCTTGGTAGAGCTAAATACTAATCTGTGCAATTTTCATATAAACAATAGGTGCAAGTCTATTGCTCTTACGAAATTCACACTAAAGATTATTCAGATTTAGATTCCATTGAACAGGCATATGTGAAATTTCTGGATTCAAGTTGTTGTCTTCGTGACATTCTTCAGAGTTCTGAATCTGTCTGCAGGACTCAGGAATGCAATGTTGACGGCTCTGAAGCCGTTCCAAAATGAACAGGGTGTAGGGATGTTCATAAATTCTTGTTTTGCACATTGCCAGAGTGAGCTGCAGGAAACATGGTTAGCACCAAATTCGCCCAGGCTGCAAAACAAGGTACTGGCAATCTACATGAAAATGTTGTGTATATGCGGTGTATTTGCAGGCAGACATAGATGATATCTGGTTTGTTTCAGACAATTGCAGAGCTGGTTGGTGAATGGTACTTTGAGAGAGGGCCTGGCATAGAAATCGATTGCGCATATCCTTGCGACTCAACTTGTCACAATATTATACCTTCTAATCAGGTTTGTTCCATTCTAGAGGAGTTTTTTTTTTAACACAAAAATACAGCATTGTATCATGTACCATATCCAAATAACTGTTTGCTTGCAATTCAAACAAAATGAATGAAACTGACAAAAAATGCTTGGTGACTAGGAATTGGGGATTTAGGAGTTTGGCAGGGGAGTATCCATGCCCAACTGTGATCAAATAACAAAGATTTCATTTAGTTTGGTGAATAAACTGAAGGATGAACACTGTTACAATGTAAGTACACTTCTCTGCAGAACAAAAAAACATCTTAATTGGATAGGATCATCGGACAGAAGGTTAGCATTAATACAATTCATATCTACTGATCCATTAAAGTAAATGCAAGAAAAAATCCAAAACAAAAATAAAGTAAAATGTATGGACTACTTGATCTTAGCCTGATAGAAATTGGGTGTTCAGTTGAGATTGCTGTACGTTGCTGTGGATGTTGCTGCAGCTGCAACCACAATAACTACTAGTTTATATCAAGCTATACTAGGCTACTGCAGCGCTGTGACTGTGCAGCACTGCAGCCACAGCCACAGCCACAGCCACAGGGAACCGAACATCCCAAATGAATATGCAGACACAGTTAATCCTGATTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031449