BGIOSGA031456

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Revision as of 04:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031456| Description = BGIOSGA031456| Definition = Oryza sativa Indica Group BGIOSGA031456, complete gene.| tag = | tid = BGIOSGA031456-TA|...")
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Gene Name

BGIOSGA031456

Description

BGIOSGA031456

Definition

Oryza sativa Indica Group BGIOSGA031456, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA031456-TA

Ensembl Protein ID

BGIOSGA031456-PA

Length

1781

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20483820..20485600

Sequence Coding Region

20485333..20485600,20485107..20485262,20484833..20485008,20484157..20484302,20483820..20483838

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20483820..20485600 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20483820..20485600 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCCTCGAGATTGCGTCAGGCCTTCTTGGGAGGGACAACATCTATCAACATCCTTGCATCTGTGGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGAGGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTNGGATGGTGTAAAGGAACTAGGCCCACGTCGAATTGTCACAGTATTACGCATTGAAGTTCCTGCTATGATGTTTGATGTAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGAAAAACCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGACCATGGAAGAATACTTGAAGCATGGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTACATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACGAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGGCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGA</cdnaseq>

Protein Sequence

<aaseq>MGSSRLRQAFLGGTTSINILASVAVGVAVGAPLEDIVKGIEEVDAIPGRCELIEEEQAFGVIVDHARTPESLSRLXDGVKELGPRRIVTVLRIEVPAMMFDVVIGCCGERERGKRPVMTKVAAEKSDVVMLTSEKPANEDPLDILDDMLAGVGWTMEEYLKHGTNDYYPPLPNGHRIFLHDIRRVAVRAAVAMGERGDVVVITGKGNDTYQIEGDKKEFFDDREECREALQYVDQLHRAGIDTSEFPWRLPESH</aaseq>

Gene Sequence

<dnaseqindica>1..268#339..494#593..768#1299..1444#1763..1781#ATGGGATCCTCGAGATTGCGTCAGGCCTTCTTGGGAGGGACAACATCTATCAACATCCTTGCATCTGTGGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGAGGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTNGGATGGTGTAAAGGAACTAGGCCCACGTCGAATTGTCACAGGTATTGTACTTTCGTCCATAGCTTCATTAAGATTGTGAATATGTTGGACATCTTTTCTATTTTGTTGTAGTATTACGCATTGAAGTTCCTGCTATGATGTTTGATGTAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGAAAAACCAGCAAATGAAGATCCATGTACGGTTCTTTCTATTTGATTATGATATCCTATTGTGATGTCAATGCATTGGGGGAGCTGAAGTTTTACACAAATTCTGTGTCCTATTTCTTAGCAGTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGACCATGGAAGAATACTTGAAGCATGGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTACATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACGAGGAGATGTAGTTGTAAGTTTTCTATGAAGTTCTTATTGTCAAGTAACCTTCTTACAATCTTATTATATATAACCCTGTAGATTGATGAAACATGCTACACTTGAGTCACCATGCATATACTCCTGTATAGAAATGCTTAATAGAGGCTGGACTTAAAATTTCAAGAATGAAGTAGTTCAAGTACCTAATCCCATTAGATGAGGAATAAAAACTTGCAAAATAGGCTATTGTGTTGCGATCTATCTGTTTTTGGGCAATTCTATCTAGTAATAAGCTGCTCTAGTTTTTGTATATTTGTACTCTCTTTCCATTGGAATTGCTAGTTAAGAGTGAGTTGGTAGCATTGATCTTCTGAGATAACAGGCTTGGTAGTTGAAGTAATTAATTATATGGTTTTAGCATTCACCATCTGCCCCGCTCTCCAGTTGGGAAGTAAGGGTTGGAGAAGGGCAAATGCTCATTCTTCAAACCAACATTTAAGATCAAAGAGACAGGTGGAGCACTTCTTGTTCATCATGCTGACAGTTCTGCTTCTCCTTCAGGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGGCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTGTGTTTCCTTTTAAACCGCTAATTGTTAGGGCTTGTTCACTTTCTAATACTTTAGGCTTTGCCTTTGTTTTACCAAAAGAAATCCAGAAAATTTTCCAGACAATCACCACCTTTTCATCTAATGCACACTTTGTGTTTTAGTTTAGCATAATTTCTTGTTTTTAAGAAAAAGTTTGGTATAACTTGCTCAGAGTTCTTTTATGAAAAAGTTTACTTCAAACCAGACCCTCTGTTATACTGATTCCGTCGCTCGATTTCTTTGGTTTCATGTGAAAACCACCAAATCGCTTATTTTGCTTCGTTGTGATTTCCGCAGGTTACCTGAAAGCCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031456