BGIOSGA031457

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Revision as of 04:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031457| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031457, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA031457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031457, complete gene.

LocusTag

OSJNBA0082M15.19

Ensembl Transcript ID

BGIOSGA031457-TA

Ensembl Protein ID

BGIOSGA031457-PA

Length

2603

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20480283..20482885

Sequence Coding Region

20482705..20482885,20482405..20482445,20481776..20481897,20481358..20481505,20481126..20481266
,20480617..20481021,20480283..20480480

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20480283..20482885 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20480283..20482885 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCGGCGACGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAGAAGGTGTTCGTGGCGCTGCCGGCTGAGAAGGGGAAGACGACGCTGTCGTGGGCGCTCGGACATTTCCGCGGCAGCGGAGCCAAGCTCGTCGTCACGCATGTGCATGTGCCGCCGCAGACGATCCCCGTCATGGGAGTTCAGTTTCATGTTAGTAACGTGAGTCCGGAGCAAGTCAAATGTGAGAAACTAGTCATTGAGAAAGAAGATGTTGTAGCTGGTCTTCTTGAACTTATTGCCTCTCATGGCATCACCAAGTTAGTAATTGCAGCTACTGCAGACAAGCACTACTCAAGAATCTCTGATTCAGTTCTCCATGACAGGGACAAGAAAGTAGAAACCACACAATCAGTTACACCTCTCAGCCAACTTTTCAAGATTGATACTCCTCCCAGCCCTGATATTGGTCAGACCATTCTGCAACCGTCAGCTGAACAGGAACAGAATGACAATGAGATGGAATTGGGGTTTTCTGATGAGCTCAATGATGCACGCGTAGCAGCTGAGAACTTGATGGAGAGAGCTTTAAGCGAATCTTTGAGGCGCCAGAGAGCAGATGAACAAGTGGTTTCATCTCTTCAGAAAGTCAAACAATTCGAGGAGTTGTACTTGGAGGAGGTGAAAAGGAGGAAAGAATTGGAAGGAGCTCTTGTCAAAGCAAACTTAGAACTTACACGGTTAAAACAAGAAATGAACATACCTAGGAATCACCAGAGCACAATCTTGGGGGATCGACAAGAAGTGATTACCGATAAATTTATCTTGAGACAACAAACTGTCGACATGAAGAGTGATTTCGGAGCCACAGGACAACTAATCAAGCCACAGCAGGAGTATCTTCAGTTACATCCTGACCATGACAATGGTGTCAGACAACCGGAAACGTTGCTACACCGAAGGAGCCTGACTGCATTTTCTCCAGCATCAACTGTACCATCACAGTTTGATAAAGACTCCATTCCTTCCCACTTCATCTGCCCGATTTCTCAGGAGATCATGAGGGAACCCTGCATTGCAGCAGACGGGTTCACCTATGAAGCTGAAGCGATCATCAATTGGTTTGATGAAGGGCACGAAGTGTCTCCCATGACCAAGCAGCCTCTTGTGCACCGCGACCTGATCCCAAACTTTGCTCTTCGTTCTGTAATCCAAGATTATACAAGGAGAAAACAGTATTCATTTTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MDPATRAAAAAAAAAVEKVFVALPAEKGKTTLSWALGHFRGSGAKLVVTHVHVPPQTIPVMGVQFHVSNVSPEQVKCEKLVIEKEDVVAGLLELIASHGITKLVIAATADKHYSRISDSVLHDRDKKVETTQSVTPLSQLFKIDTPPSPDIGQTILQPSAEQEQNDNEMELGFSDELNDARVAAENLMERALSESLRRQRADEQVVSSLQKVKQFEELYLEEVKRRKELEGALVKANLELTRLKQEMNIPRNHQSTILGDRQEVITDKFILRQQTVDMKSDFGATGQLIKPQQEYLQLHPDHDNGVRQPETLLHRRSLTAFSPASTVPSQFDKDSIPSHFICPISQEIMREPCIAADGFTYEAEAIINWFDEGHEVSPMTKQPLVHRDLIPNFALRSVIQDYTRRKQYSFS</aaseq>

Gene Sequence

<dnaseqindica>1..181#441..481#989..1110#1381..1528#1620..1760#1865..2269#2406..2603#ATGGATCCGGCGACGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGAGAAGGTGTTCGTGGCGCTGCCGGCTGAGAAGGGGAAGACGACGCTGTCGTGGGCGCTCGGACATTTCCGCGGCAGCGGAGCCAAGCTCGTCGTCACGCATGTGCATGTGCCGCCGCAGACGATCCCCGTCAGTACGTGCCCTGCCCCCCCCCCCCCCCCCTCCTCTTGATCGTCATTAGATGTTTAACTGTTCGGTTTAAGAATGTGTCGTCTAATGATCCTCCATGGCTGCCTGTCCTATCAAGGAAGCTCGTGTACATCGTGAAAGATTCGTGGACTGTGACTCTTTTGTTCCTTTGGGAAAGACAGCAGTAGGATGTTCATGTTGTCCTCTTTTGCAAATACATTCTCTAAATATTAACTAAGATTATCTTCTTCTTTTAATCTCAGTGGGAGTTCAGTTTCATGTTAGTAACGTGAGTCCGGAGCAAGTAAGCTTGTTCAGAAGAACTGAGCGTGAAAGGGTGAATAAGCTTTTAGACGAATACGTCCATCAATGCTGGAAAATGAAGGTGCTATCCATTTTCCCCATCTTCCTCCATTTCTCCTGCAGTTTCATGCACCTGGCATCAGATTTTTGTGCAGTAGTTATCATTAAGATGACCTTTTGGTTGGTTGCTGCCACATTAGTAGTAGTACTTTTTTTTTTCGCGAACACGCAAAGGATTGCACGTCAATATATTAGAAGAATAGAGTTTTGTTACACGACGCACTCAGCCAGACCGGCCTATGCCAAGGAAGAAAGAAAACAAAGATAAAAAACAAGGAGGAAAAGGAAAAAAAACTCGATACGACGGTAACTCTACTCCAAACAGCGGGAGGGAGCAGAAGTAGTAGTACTAATTACATTAACCGTTGAAACTTTGCACAGAATCAAAATGTTTTCGAAGGTGAAGATTCATGCTTAACCTTGATTTACAATGGTTCGTATATTTCAGGTCAAATGTGAGAAACTAGTCATTGAGAAAGAAGATGTTGTAGCTGGTCTTCTTGAACTTATTGCCTCTCATGGCATCACCAAGTTAGTAATTGCAGCTACTGCAGACAAGCACTACTCAAGGTACATCTAGCATTACAAAATTGTTTCGGTGTAAAGATTCAATTGTGCTATGTATTTGGTAGAATTAGGAAGTTCAGATTATATTTATCCTTCTCGGTTTCAGAAAGATGGACAAACCAAAGTCCAAGATAGCAACAGAAATCATGCAGAGAGCTGACGCATCATGCCAGATTTGGTTTGTGTGTAAGGAACAGCTAATCTGTACCAGGTATAATCTGATGTGTTGCACACTTTTCGATTTCTGATGACTATTGAACATCGAACCCTCAGAATCTCTGATTCAGTTCTCCATGACAGGGACAAGAAAGTAGAAACCACACAATCAGTTACACCTCTCAGCCAACTTTTCAAGATTGATACTCCTCCCAGCCCTGATATTGGTCAGACCATTCTGCAACCGTCAGCTGAACAGGAACAGGTTTCATCAGATTATGCAGTAGATATTCTGATTTTTAAAATTGTATCTTCAAAGCATGAGTATAACATGATAGCGGTGCTTTTGTTTTCAGAATGACAATGAGATGGAATTGGGGTTTTCTGATGAGCTCAATGATGCACGCGTAGCAGCTGAGAACTTGATGGAGAGAGCTTTAAGCGAATCTTTGAGGCGCCAGAGAGCAGATGAACAAGTGGTTTCATCTCTTCAGAAAGTAATTATGCTACCCATTTGACTGATTTCTTCATAAATGCTAAACTAAAAGTTGGCAATACTATTTATTTTAAAAGATTTTGATAATAACTCTGAACCTCCCAGGTCAAACAATTCGAGGAGTTGTACTTGGAGGAGGTGAAAAGGAGGAAAGAATTGGAAGGAGCTCTTGTCAAAGCAAACTTAGAACTTACACGGTTAAAACAAGAAATGAACATACCTAGGAATCACCAGAGCACAATCTTGGGGGATCGACAAGAAGTGATTACCGATAAATTTATCTTGAGACAACAAACTGTCGACATGAAGAGTGATTTCGGAGCCACAGGACAACTAATCAAGCCACAGCAGGAGTATCTTCAGTTACATCCTGACCATGACAATGGTGTCAGACAACCGGAAACGTTGCTACACCGAAGGAGCCTGACTGCATTTTCTCCAGCATCAACTGTACCATCACAGTTTGATAAAGACTCCATTCCTTCCCACTTCATCTGCCCGATTTCTCAGGTTTTCATATCCTCAGACAAACAAAATCTCAAAATTCTGTACTTTTCTTTACAGTAATATAAATACTTTTGACAAATTATGTTGCTTCAGAAGAGACGTTTGAGTTGACCATGTTTTGATTTGCATGTAATTGCAGGAGATCATGAGGGAACCCTGCATTGCAGCAGACGGGTTCACCTATGAAGCTGAAGCGATCATCAATTGGTTTGATGAAGGGCACGAAGTGTCTCCCATGACCAAGCAGCCTCTTGTGCACCGCGACCTGATCCCAAACTTTGCTCTTCGTTCTGTAATCCAAGATTATACAAGGAGAAAACAGTATTCATTTTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031457