BGIOSGA031459

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Revision as of 04:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031459| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA031459, complete gene.| tag = OS10G05...")
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Gene Name

BGIOSGA031459

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031459, complete gene.

LocusTag

OS10G0548700

Ensembl Transcript ID

BGIOSGA031459-TA

Ensembl Protein ID

BGIOSGA031459-PA

Length

4797

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20468758..20473554

Sequence Coding Region

20473272..20473554,20472329..20472450,20472125..20472246,20471937..20472041,20471351..20471762
,20471135..20471275,20470513..20471061,20469662..20470426,20468758..20468958

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20468758..20473554 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20468758..20473554 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCGAGGGGCGGCGGCGCCGACGCGTGGGAGACGGCGAGCGCGCGGAGCGGCGTCTCCTCCTCCTCCTCCGGCCGCGCGACGGCCGCGGCGGCGGCGCCGGCGCCGGAGAACAAGGTGTTCGTGGCGCTCCCGGCGCAGCACAAGAGCGGCAGGTCCACGCTCGCGTGGGCGCTCCGGCACGTCGCCGAACTGGCTCCGGCGGCGATCGGCGGCGGCGGCGAGGTGGTGGTGGTGGCGGCGCACGTCCACTCGCCGGCGCAGATGATTCCGATTAGCATGGGAGGCAAGTTCCATGCAAGTAAATTGAGACCGGAACAGGTCAGTACTTACAGAAAATATGAAAGGGAGCAGGTGGAGAAGAATTTGGATGAATACCTCGAGCAATGCACAAAAATGAAGGTCAAATGTGAGAAAATTGTTATTGAGAATGAAGACATTGCTAATGGGATTACAGAGCTTATTTTGCTGCATGGGGTAAGTAAACTCGTCATGGGAGCAGCTGCTGACAAGCAATACTCCAGGAAAATGAAATTGCCCAAGTCCAAAACAGCACTCTCAGTCACGGTTAAAGCAAATCCTTCATGCAAGATTTGGTTTGTTTGCAAGGAGCATCTGATATACACTAGAGATTTTGTTGCTCCTATTTCTCCAAATTCACAATCACCTGACACTATCAGAGGCTCAATATCCAATCTAGCTGCACGGGGAGGAACTACAAACCAATATGCAAACAATGCAGTTAACGGTTACGTACAGAGGTCCATGTCTGAAATGGTTGTCCCTGCATCTAGCAGGGTATCATTGCAACTGCATTCTCGATCATCGTTACAGGAGTCCCTTAGCAGGCTAAACATGGAGGGTACCTCTGTTGATTCCTGGGATAGCTTCCGCAGAGGAAGCTTTCCAAGTTCATACCGAGCTTCTTCTACTGTGACTGAAGAAGTGTTGAGCGATTCTAGTTCATCTGGAATACCTAGAGATGGCATCTCAACACTTGCAGGTTGTGACTTTCCAAACTCAGCACTGCACCATGAACAGGGTGACGCAGGTTCAAATGCTAACCTATTTGATAAACTTGAAGAAGCCTTCGCAGAGGCTGAGAGGTATAGGAAGCAAGCATATGATGAGTCACTGACAAGACAAAAGACAGAAGAAGAATTGATTTCATATCACCAAAAGGCCAGGAAATCTGAGGATTTGTTCTTAAATGAGGCCAAGCAAAGGAAAGAGGTTGAGGAAACCCTAGCAAAGGCAAATGTGGAGATACAATTATTGAAGGAAGAAATGGATGCACTGAAACACAACCGAGATGACCTCAGCAGTAAGCTTTCCGAGGTGAGTGAACAGAAAGTGACACTAGAGCAACAGGCCGTGGAATATGGAAGCATTATCATTGATCTCAAGGATACAGTTGCAGCAAGCCAAGCCCTCATTGATTCAATGCAAATGGAGTTTGAACAATTGAAGCATGAAAGAGACAATGCACTCAAACATGCAGAAGAGCTGCACAGAGAGAAACAAAACATGGTATCGAGCTCAGGCTTGGAATGGAGCACTGAATTCTCTTTGTTGGAGCTGCAGCAGGCAACACAAAATTTCAGTGATGCAATGAAAATTGGAGAAGGTGGGTTTGGGTGTGTCTACAGGGGTCAGCTTCGTAACACCACTGTTGCAATTAAGATGCTTCGCTCTCAGAACTTGCAAGGGCAGTCACAGTTTCAGCAAGAGGTTGCTGTTCTTAGTAGAGTAAGGCATCCAAACCTTGTAACTCTTGTAGGTTATTGCTCAGAAGCTTCAGGTCTTGTGTATGAATTCTTACCAAATGGAAGCCTTGAAGACCATCTAGCCTGTGAAAGCAACACGTCTCCGCTTACATGGCAGATCCGTACACGGATCATCGGTGAGATATGTTCGGCGCTCATCTTCCTTCACTCTGACAAGCCTCACGCAGTCATCCATGGTGATCTCAAGCCAGCAAACATTCTTCTTGATGCAAATTTGGTCAGTAAGCTTGGTGACTTTGGAATCTCTCGCCTCCTAAATAGGTCTAGCACAGTGTCCACGAGCTTCTACCAAACAACAAATCCAAGGGGAACTTTTGCTTACATGGACCCTGAATTTCTTACAACTGGGGAACTAACAGCACGGTCTGACATATACTCATTTGGCATTATCATACTGCGACTGGTGACTGGGAAGCCAGCTTTAGGCATTGCAAGGGAGGTGGAGGTTGCACTTGATAAGGGTGAGTTGGAGTTGCTTGTTGACCGATCTGCTGGAGACTGGCCGTTTGTGCAGGCTGAGAAGCTGATGCTTCTTGGCCTGCAGTGTGCAGAGCTTAGCAGAAGGAAGCGCCCTGATCGTATGAATCATGTGTGGAGCGTGGTCGAACCCCTTGTAAAGTCTGCTTCGCTGCCAGTAGAACCAGAATCCATTGGACATTGGGTGAATAAGAACCGCACGCCATTCTACTTCATATGCCCAATTTCTCAGGAGGTCATGAGGGATCCTCACATTGCAGCAGATGGGTTCAGTTACGAAGAGGAGGCCATCAAAGGATGGCTCGGCAGCGGGCACAACACCTCCCCGATGACAAAATCAACTCTGGAACATCTTCAGCTGATCCCGAATCTCGCTCTTCGTTCTGCCATTGAGGAATTTATGCAGCAGAAGCAGCAGCAGATTCCATCATAG</cdnaseq>

Protein Sequence

<aaseq>MGSRGGGADAWETASARSGVSSSSSGRATAAAAAPAPENKVFVALPAQHKSGRSTLAWALRHVAELAPAAIGGGGEVVVVAAHVHSPAQMIPISMGGKFHASKLRPEQVSTYRKYEREQVEKNLDEYLEQCTKMKVKCEKIVIENEDIANGITELILLHGVSKLVMGAAADKQYSRKMKLPKSKTALSVTVKANPSCKIWFVCKEHLIYTRDFVAPISPNSQSPDTIRGSISNLAARGGTTNQYANNAVNGYVQRSMSEMVVPASSRVSLQLHSRSSLQESLSRLNMEGTSVDSWDSFRRGSFPSSYRASSTVTEEVLSDSSSSGIPRDGISTLAGCDFPNSALHHEQGDAGSNANLFDKLEEAFAEAERYRKQAYDESLTRQKTEEELISYHQKARKSEDLFLNEAKQRKEVEETLAKANVEIQLLKEEMDALKHNRDDLSSKLSEVSEQKVTLEQQAVEYGSIIIDLKDTVAASQALIDSMQMEFEQLKHERDNALKHAEELHREKQNMVSSSGLEWSTEFSLLELQQATQNFSDAMKIGEGGFGCVYRGQLRNTTVAIKMLRSQNLQGQSQFQQEVAVLSRVRHPNLVTLVGYCSEASGLVYEFLPNGSLEDHLACESNTSPLTWQIRTRIIGEICSALIFLHSDKPHAVIHGDLKPANILLDANLVSKLGDFGISRLLNRSSTVSTSFYQTTNPRGTFAYMDPEFLTTGELTARSDIYSFGIIILRLVTGKPALGIAREVEVALDKGELELLVDRSAGDWPFVQAEKLMLLGLQCAELSRRKRPDRMNHVWSVVEPLVKSASLPVEPESIGHWVNKNRTPFYFICPISQEVMRDPHIAADGFSYEEEAIKGWLGSGHNTSPMTKSTLEHLQLIPNLALRSAIEEFMQQKQQQIPS</aaseq>

Gene Sequence

<dnaseqindica>1..283#1105..1226#1309..1430#1514..1618#1793..2204#2280..2420#2494..3042#3129..3893#4597..4797#ATGGGCTCGAGGGGCGGCGGCGCCGACGCGTGGGAGACGGCGAGCGCGCGGAGCGGCGTCTCCTCCTCCTCCTCCGGCCGCGCGACGGCCGCGGCGGCGGCGCCGGCGCCGGAGAACAAGGTGTTCGTGGCGCTCCCGGCGCAGCACAAGAGCGGCAGGTCCACGCTCGCGTGGGCGCTCCGGCACGTCGCCGAACTGGCTCCGGCGGCGATCGGCGGCGGCGGCGAGGTGGTGGTGGTGGCGGCGCACGTCCACTCGCCGGCGCAGATGATTCCGATTAGCAGTACGTGTGTCCTCCCGCTTCTTCGCCTTCTCTCGTCGTCGCTCTGCAAACCCCCACGCCACAAGCTGCAGGGCTTATATCAGCCGTTCGATTAGCTATGTACGGTCAGGATTCAGACGGCCCTGATTGGCTGATGCATTTTTTGTGAGGAAGCCCCTGTAGTTTTTACGTATTCCATTCTGATGCATTTTTGTGAGGAAGCCCCTGTATTTTTTTCGTATTCTATTCTGAACTCCTTTTTAGTTCACTACTGAGTCCCAGTCCTGAATCCCCCAATGCGGCGCCCCCTGCCTCGCCGGGGACGGCGGCGAGGGGTGTCGCGACGGGAGCTCACTCCGGCGACGGCGAGCATCTTCGCGCGCACAATTATCCCGAGGATGTGGCTGGGCTAGGATCGTGCAGAGATTCCCGCTTCCTTTTGGTCCAAATGCGACTGGGTTTTAGCCTTTTAGGGCAAAGGGGAAGTATTATTTCCTACTGAGTTGTTCATCGATTCGCTTGTCTGAATTGCCAAAATTGGTTACTGTCTAGGTGATTGTATTCGGTTTTTTTTTTCAAACTCTTAATGCGAACTGATAATTTCTAGGATTGGTGCCCATGGATGCACGCTGAGTCAGTTCAGAATAGAACTGAAGTAGTGGTCAGTCTCAGTCCACAGTTCACAGTAAATATTCATTTTAGAAGAACAAATCGCGTGAAGGTTGATTAGATGTTGACCTCATGTGTTAAATTTCAGCTAAATCTGATATTGCAACTTCAAATGACATACTTTGTTCGCGTGGTGTACTAATTACTAAACAACTCATCTAATTACATGGTAGTGGGAGGCAAGTTCCATGCAAGTAAATTGAGACCGGAACAGGTCAGTACTTACAGAAAATATGAAAGGGAGCAGGTGGAGAAGAATTTGGATGAATACCTCGAGCAATGCACAAAAATGAAGGTTCAGGCAATCTTCTCATTCATTCTTAGTAATGAAGTCTGAATTGCTATGGGGAACAAGTTAAGTGTATTATATTTTTCAGGTCAAATGTGAGAAAATTGTTATTGAGAATGAAGACATTGCTAATGGGATTACAGAGCTTATTTTGCTGCATGGGGTAAGTAAACTCGTCATGGGAGCAGCTGCTGACAAGCAATACTCCAGGTGTGTCTTCATTTCTGCTACCGATTTGTACTTTTGTTGCATCATATATCTAGCTAAGTGATGCCTCAAAACTCTAATTTCAGGAAAATGAAATTGCCCAAGTCCAAAACAGCACTCTCAGTCACGGTTAAAGCAAATCCTTCATGCAAGATTTGGTTTGTTTGCAAGGAGCATCTGATATACACTAGGTATTAAGAATATGATCATGAGCAGTATGCATGCCATACCTCTGGACCGACCAGTCATCTGTATATTCATTTCATACCGACTTCATATATTGTTTCCTAGATACTAGCCATTCTGTTAGTGTTCTCCCTTTTCCAAAATCATTTTGAGTAATTCTCTCTTTAAACTGTGTTCAGAGATTTTGTTGCTCCTATTTCTCCAAATTCACAATCACCTGACACTATCAGAGGCTCAATATCCAATCTAGCTGCACGGGGAGGAACTACAAACCAATATGCAAACAATGCAGTTAACGGTTACGTACAGAGGTCCATGTCTGAAATGGTTGTCCCTGCATCTAGCAGGGTATCATTGCAACTGCATTCTCGATCATCGTTACAGGAGTCCCTTAGCAGGCTAAACATGGAGGGTACCTCTGTTGATTCCTGGGATAGCTTCCGCAGAGGAAGCTTTCCAAGTTCATACCGAGCTTCTTCTACTGTGACTGAAGAAGTGTTGAGCGATTCTAGTTCATCTGGAATACCTAGAGATGGCATCTCAACACTTGCAGGTTGTGACTTTCCAAACTCAGCACTGCACCATGAACAGGTAAGCTCTAATACCAAATTTAAGCTTTGGATGATTAGCTAGGAATCTTATTCCATTACATGGTGCTGTATCCAGGGTGACGCAGGTTCAAATGCTAACCTATTTGATAAACTTGAAGAAGCCTTCGCAGAGGCTGAGAGGTATAGGAAGCAAGCATATGATGAGTCACTGACAAGACAAAAGACAGAAGAAGAATTGATTTCATATCACCAAAAGGTAAACCCTTCACCAAGTTAGCATAAAAAATTGCAGGTTTTTTTACACAAAGATCTAATGGACCTGGTTACAGGCCAGGAAATCTGAGGATTTGTTCTTAAATGAGGCCAAGCAAAGGAAAGAGGTTGAGGAAACCCTAGCAAAGGCAAATGTGGAGATACAATTATTGAAGGAAGAAATGGATGCACTGAAACACAACCGAGATGACCTCAGCAGTAAGCTTTCCGAGGTGAGTGAACAGAAAGTGACACTAGAGCAACAGGCCGTGGAATATGGAAGCATTATCATTGATCTCAAGGATACAGTTGCAGCAAGCCAAGCCCTCATTGATTCAATGCAAATGGAGTTTGAACAATTGAAGCATGAAAGAGACAATGCACTCAAACATGCAGAAGAGCTGCACAGAGAGAAACAAAACATGGTATCGAGCTCAGGCTTGGAATGGAGCACTGAATTCTCTTTGTTGGAGCTGCAGCAGGCAACACAAAATTTCAGTGATGCAATGAAAATTGGAGAAGGTGGGTTTGGGTGTGTCTACAGGGGTCAGCTTCGTAACACCACTGTTGCAATTAAGATGCTTCGCTCTCAGAACTTGCAAGGGCAGTCACAGTTTCAGCAAGAGGTAATAGATTAATAGCAACTCTGAAACCATAATTGCAAATTGATTTTGTATTGCTTTAGTTGTACTAAACTAATGTTACTGGGCAGGTTGCTGTTCTTAGTAGAGTAAGGCATCCAAACCTTGTAACTCTTGTAGGTTATTGCTCAGAAGCTTCAGGTCTTGTGTATGAATTCTTACCAAATGGAAGCCTTGAAGACCATCTAGCCTGTGAAAGCAACACGTCTCCGCTTACATGGCAGATCCGTACACGGATCATCGGTGAGATATGTTCGGCGCTCATCTTCCTTCACTCTGACAAGCCTCACGCAGTCATCCATGGTGATCTCAAGCCAGCAAACATTCTTCTTGATGCAAATTTGGTCAGTAAGCTTGGTGACTTTGGAATCTCTCGCCTCCTAAATAGGTCTAGCACAGTGTCCACGAGCTTCTACCAAACAACAAATCCAAGGGGAACTTTTGCTTACATGGACCCTGAATTTCTTACAACTGGGGAACTAACAGCACGGTCTGACATATACTCATTTGGCATTATCATACTGCGACTGGTGACTGGGAAGCCAGCTTTAGGCATTGCAAGGGAGGTGGAGGTTGCACTTGATAAGGGTGAGTTGGAGTTGCTTGTTGACCGATCTGCTGGAGACTGGCCGTTTGTGCAGGCTGAGAAGCTGATGCTTCTTGGCCTGCAGTGTGCAGAGCTTAGCAGAAGGAAGCGCCCTGATCGTATGAATCATGTGTGGAGCGTGGTCGAACCCCTTGTAAAGTCTGCTTCGCTGCCAGTAGAACCAGAATCCATTGGACATTGGGTGAATAAGAACCGCACGCCATTCTACTTCATATGCCCAATTTCTCAGGTATGCATGTCCAACCTCTCCGCGGTGCAGTAAATAACATGTCATAGACTCATAGTTGCATACACGATAACTGGGATTACAAATGTGGTAAGCAAAAGCTGTGGATGTTTTGCTTCTTTATTGCAATCGAGTATGATGGAAGCACAACACCATCCATGTTTCTCAGTACTTGGCTGTGTACATCCGTTTGGATGTAGAGGCCGGTTTAATCCATTATCTAAAAACAAATGTTTCTCAGAACTATCCAAAAGTTATTGTGTTGGCGGTTCTGTGTATAGTACGACTGAATTTAACTTTGATATTTTTAGACTTATGGCATGTTAGTTTAGAAATACAGCATCTCGTGCTTAAAAATCACCCATGTTCAAGGCTTAAAGATACTAGGAGCTATCTCTGTTCTAAAACAAGTTCTGGTTTTACCGAGAGTTGCTTCCTTGAGAACTGTTGCCACACTTAATGAGGGACAGAGATCGGAACTTCTTTCTGAGGGAAAATATGAATGTTAACAAGTGTGCATGCTTTGATCTCTCAGATTTTATTGTTGTTCTGGAACTATTTTTTTTTCTGATATAACTTTCTGAATAATTATATTATGCTTGCTGAAGTAGAATATTAAAGTTCCTTGCAGCATTTTTTGGTGGGGAATAATAATATGCTACTAACAGTCTAACAGCTGCTGAGCTTGGTTGAAACAATATTGTAGGAGGTCATGAGGGATCCTCACATTGCAGCAGATGGGTTCAGTTACGAAGAGGAGGCCATCAAAGGATGGCTCGGCAGCGGGCACAACACCTCCCCGATGACAAAATCAACTCTGGAACATCTTCAGCTGATCCCGAATCTCGCTCTTCGTTCTGCCATTGAGGAATTTATGCAGCAGAAGCAGCAGCAGATTCCATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031459