BGIOSGA031473

From RiceWiki
Revision as of 04:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA031473| Description = BGIOSGA031473| Definition = Oryza sativa Indica Group BGIOSGA031473, complete gene.| tag = | tid = BGIOSGA031473-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA031473

Description

BGIOSGA031473

Definition

Oryza sativa Indica Group BGIOSGA031473, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA031473-TA

Ensembl Protein ID

BGIOSGA031473-PA

Length

3067

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20297695..20300761

Sequence Coding Region

20300371..20300761,20299839..20300284,20298805..20299089,20298075..20298325,20297695..20297782

Genome Context

<gbrowseImage1> name=IndicaChromosome10:20297695..20300761 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:20297695..20300761 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGCGATCCGGGGGGAGGAAGCTGCCCTTCTTCGCCTCGAACGCCTCCACGTCGTCCTCCACCAAGCGGACCCGCTCGGCGCGCCGCCTCCCCTCGCTCACCAGGCCGCGCGCGTCGAGCTCCCCATCCCCGGCGTCGCCGTCCCCGCCGCCGCCGTCCGCGTCGCACCCCGCCCCTCCGTCCCCTCCCCTCGCCGTATCTCCCGCCGGCGCCGGTAAGGTCGGGAAGAAGAAGGCCGGGGCGCGCCTCTGGATGCGGCTCGACCGGTGGGGCGTCTCCGAAACCCTCCATCTCGACAAGGGCTCCATCATCCGACGCGCCGGCCTGCCGCCGCGGGACCTCCGGATCCTCGGCCCCGTCTTCTCCGACTCCTCCAGCATCCTCGCTAGAGAGAAGGCGATGGTGATCAACCTAGAATTCATCAGGGCGATCGTTACGGCCGATGAGATCCTTCTACTGGATCCTCTCACAATCGATGTGATCCCTTTTGTTGAGCAATTGACACATCATCTCCCTCTCAAGAACCTGGTGTGTGGGAATGGTCAACCTGGTGGTGATGACCATGGGGAAAAGCATGATGACTCGCCTGGAGATCAGGTGCCCCGCCTTAACGAGGCCACCGGAGCAGAGCACGAGTTGCCATTTGAATTCCAGGTGCTGGAGCTCGCACTCGAGACCGTGTGCTCATCATTCGACGTTAACGTGTCTGGTCTTGAAAGGCGCGCCACTCCGGTACTTGAGGAACTGACCAAGAATGTCAGCACAAGGAATCTCGATCGTGTGCGAACTCTCAAGAGTGATCTTACCCGTTTGCTTGCCCATGTGCAGAAGGTCAGAGATGAAATAGAACATCTTCTGGATGATAATGAAGACATGGCACATCTGTATCTAACAAGGAAGCAATTACAAAACCAGCAAGTTGAGGCTTTAATATCATCGGCTGCTTCCAATAGCATTGTTCCTGGAGGAACAAGTCTGTCCAGGTTGAACAATAGTTTTCGGCGCAGCGTGAGCATCGCTACAAGCATGCATTTGGATAATGACGTGGAAGACCTAGAGATGTTGCTTGAGGCTTACTTCATGCAATTGGATGGAATTCGCAACAGAATTTTGTCGGTTCGAGAGTATATTGATGATACAGAAGACTATGTCAATATTCAACTTGACAACCAGCGTAATGAACTTATTCAGCTTCAGCTTACACTGACTATTGCATCCTTCGGCATAGCTGTCAACACCTTCATAGCTGGGGCTTTTGCGATGAACATCCAGAGCAAATTGTACAGCATTGATGATGGTAGCTTCTTTTGGCCATTTGTTGGGGGCACCTCATCGGGCTGCTTCATGATCTGCATCGTCTTATTATGGGGATCCAATCATCCTGAGGCAGCAGTATGTCTTCTTTGCAGAGAGATAGCTGATGAATCACTGAACTTTATGGACAATACTGAATAG</cdnaseq>

Protein Sequence

<aaseq>MGRRSGGRKLPFFASNASTSSSTKRTRSARRLPSLTRPRASSSPSPASPSPPPPSASHPAPPSPPLAVSPAGAGKVGKKKAGARLWMRLDRWGVSETLHLDKGSIIRRAGLPPRDLRILGPVFSDSSSILAREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDDHGEKHDDSPGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQQVEALISSAASNSIVPGGTSLSRLNNSFRRSVSIATSMHLDNDVEDLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNIQSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWGSNHPEAAVCLLCREIADESLNFMDNTE</aaseq>

Gene Sequence

<dnaseqindica>1..391#478..923#1673..1957#2437..2687#2980..3067#ATGGGGAGGCGATCCGGGGGGAGGAAGCTGCCCTTCTTCGCCTCGAACGCCTCCACGTCGTCCTCCACCAAGCGGACCCGCTCGGCGCGCCGCCTCCCCTCGCTCACCAGGCCGCGCGCGTCGAGCTCCCCATCCCCGGCGTCGCCGTCCCCGCCGCCGCCGTCCGCGTCGCACCCCGCCCCTCCGTCCCCTCCCCTCGCCGTATCTCCCGCCGGCGCCGGTAAGGTCGGGAAGAAGAAGGCCGGGGCGCGCCTCTGGATGCGGCTCGACCGGTGGGGCGTCTCCGAAACCCTCCATCTCGACAAGGGCTCCATCATCCGACGCGCCGGCCTGCCGCCGCGGGACCTCCGGATCCTCGGCCCCGTCTTCTCCGACTCCTCCAGCATCCTCGGTGAGCTCGACCACGCCCCCATTAGTATCGATTGCTGCTTAGGGGGTCGCTTTTGTTGTGACAATACACAATGTTTAATTGTGCAGCTAGAGAGAAGGCGATGGTGATCAACCTAGAATTCATCAGGGCGATCGTTACGGCCGATGAGATCCTTCTACTGGATCCTCTCACAATCGATGTGATCCCTTTTGTTGAGCAATTGACACATCATCTCCCTCTCAAGAACCTGGTGTGTGGGAATGGTCAACCTGGTGGTGATGACCATGGGGAAAAGCATGATGACTCGCCTGGAGATCAGGTGCCCCGCCTTAACGAGGCCACCGGAGCAGAGCACGAGTTGCCATTTGAATTCCAGGTGCTGGAGCTCGCACTCGAGACCGTGTGCTCATCATTCGACGTTAACGTGTCTGGTCTTGAAAGGCGCGCCACTCCGGTACTTGAGGAACTGACCAAGAATGTCAGCACAAGGAATCTCGATCGTGTGCGAACTCTCAAGAGTGATCTTACCCGTTTGCTTGCCCATGTGCAGAAGGTACTATTAGAGATAGAGTAGTGCGTGCCTTTGGTCTGGCAAAGTTCAAAGTTTTCATCCCTGTTTGACTGTCTTTATTATGCATATTAATTTGACTGATCAAAAGCTATATTCATAGTATGTTCTAGCTGTTCTTTTCTGTGGTTAAAGTTTAATTGCACTAAGGGGCATGGATGATCCAAACAGGCCCTAAGACAATAATATTTCTTCTTTGGAGCTATGTGGATATAACTGAACTTAAAAGCAGTACTGAATATTTGTTCAAAAGAATAGTGTGCCTGACATAGCCAGTATAATTTTACCATCTCAAACTTATAATAGTTATGGTTCACCGTGGACCAATCACCAACTGAAGTCTGCTGTGCCGTGGTCCTGTGTGCACGGGGGAACAATTGTTTCATGTACATAGAGATGTTGTAGTGCATGTGTTGAAAGAGCCAAAGTCTTCAGGTGTATATACTTTGGATTATCAAAATACATGTTTATATAATTTTAGTTCTTACTGTATGGTTGGAACTTGGGTCATATAAAACAAAAGGTGGTTATAAACAACTGATTTTTTTTTTGTTCGTGATGTTCTATGTACCTACCTATTCATTTCTTTTTAAAGCTTGTTGATTTTATTTTATATGCAGTATTGCTGCTGGGTAGTTTGGCTGTACTTTTGAGAACCTTGATGGTTACCTGCATGCTGCTCTAAACAAGGGTTTCTTCTGAAGATATGTATCTTAACCCTCATATCATTTCAGGTCAGAGATGAAATAGAACATCTTCTGGATGATAATGAAGACATGGCACATCTGTATCTAACAAGGAAGCAATTACAAAACCAGCAAGTTGAGGCTTTAATATCATCGGCTGCTTCCAATAGCATTGTTCCTGGAGGAACAAGTCTGTCCAGGTTGAACAATAGTTTTCGGCGCAGCGTGAGCATCGCTACAAGCATGCATTTGGATAATGACGTGGAAGACCTAGAGATGTTGCTTGAGGCTTACTTCATGCAATTGGATGGAATTCGCAACAGAATTTTGTCGGTTAGTCCTTTTACCCATTTTGTCATATATGCAGTAATGCTATATGACTTATCCTAGTGTTCATTTGGACTTATTCTCTGCTGGACTTATCATGAATGAATATAACTGTGAAGTTCTTGTTGGGAGATAAATTGTAAAGATACACAGCCACGTCTTGTTCCTAAACATATATTTGAGTTAGTATTCAAGTTAGCATAGATGTTGAATTCTTTAACTACTAGAAGTTGCTAAACATATATTTGAGTTAGTATTCAAGTTTGCAATAGATGTTGAATTCTTTAACTACTACTAGACTAGAAGTAGAAGTTGCTAAACATAGATTTGAGTTAGCAATAGATGTTGAATTCTTTAACTACTAGAAGCACATCTCTCTTTTCTGATGAAGAAACAAGGAAAGTATATCACTTTTCTGTATAATTCTTTGGCGCCCTTATGCTATATCTTGGCGTGACATAATTTCTCGTTTGGGAATTAAACAGGTTCGAGAGTATATTGATGATACAGAAGACTATGTCAATATTCAACTTGACAACCAGCGTAATGAACTTATTCAGCTTCAGCTTACACTGACTATTGCATCCTTCGGCATAGCTGTCAACACCTTCATAGCTGGGGCTTTTGCGATGAACATCCAGAGCAAATTGTACAGCATTGATGATGGTAGCTTCTTTTGGCCATTTGTTGGGGGCACCTCATCGGGCTGCTTCATGATCTGCATCGTCTTATTATGGTATGCCCGGTGGAAGAAGTTGCTCGGTCCTTGAACACAATGTAACAAGTCACGACTCATGAGAACTGTCTCGCTGTAAAGGGCATGCATTTTGACTCGTAACGTCTGCAGAAAGGAGCAGTCATTTGAAACATAAAAGAGAATCCTAGGATTAGGGAGAAACTCTAATGCATTTATGTTTCACTGGTAAATAAGATACATTTTCTGTAGTTTTCCCTTGGTAAAAATGTAGTATACTAACATGTTATGATCATCAGCACCCTTGAATTGATTGTGGATTTGTGGGTTATAGGGGATCCAATCATCCTGAGGCAGCAGTATGTCTTCTTTGCAGAGAGATAGCTGATGAATCACTGAACTTTATGGACAATACTGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031473